RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 YPEL1O60688 119 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 HLA-DQA1P01909 254 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 SPART-AS1P0CW21 52 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 KLF5Q13887 457 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-208ENST00000508342 ZNF876PQ49A33 203 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 CYB561D1Q8N8Q1 229 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 OR1P1Q8NH06 330 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 IGF2BP2-AS1Q96M15 143 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 YPEL2Q96QA6 119 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 PSMG3Q9BT73 122 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-208ENST00000508342 CENPFP49454 3210 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 FLG2Q5D862 2391 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-208ENST00000508342 CRYBB3P26998 211 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 FGF9P31371 208 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-208ENST00000508342 HEPN1Q6WQI6 88 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 SLC25A48Q6ZT89 311 aaKnown RBP2.36□□□□□ -2.03
NEDD4-208ENST00000508342 MLST8Q9BVC4 326 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 CSTL1Q9H114 145 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 OVOL3O00110 214 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 LEPROTL1O95214 131 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 MT-ND6P03923 174 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 ANGP03950 147 aaKnown RBP2.36□□□□□ -2.03
NEDD4-208ENST00000508342 HBBP68871 147 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 UBE2V2Q15819 145 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 COL5A1-AS1Q5SY13 56 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 LINC00114Q6XXX2 140 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 ZNF497Q6ZNH5 498 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 Q6ZWC4 215 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 OR8D4Q8NGM9 314 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 IGFBPL1Q8WX77 278 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 DSCAML1Q8TD84 2053 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 A0A1W2PP11 408 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 GAGE12BA1L429 117 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 NPIPB5A8MRT5 1133 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 GAGE7O76087 117 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 GAGE12FP0CL80 117 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 GAGE12GP0CL81 117 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 GAGE12IP0CL82 117 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 ARL14EPLP0DKL9 152 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 FABP2P12104 132 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 TAL2Q16559 108 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 ZNF503Q96F45 646 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 SIRPDQ9H106 197 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 CYSLTR1Q9Y271 337 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 A0A1B0GUT8 65 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 G3V4G9 280 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-208ENST00000508342 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-208ENST00000508342 ATP6V0E1O15342 81 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 IGLV2-23P01705 113 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 NOTCH2NLQ7Z3S9 236 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 RNF5Q99942 180 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 WFDC6Q9BQY6 131 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 SMIM2Q9BVW6 85 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 SNHG12Q9BXW3 62 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 NAA50Q9GZZ1 169 aaKnown RBP2.36□□□□□ -2.03
NEDD4-208ENST00000508342 TMEM222Q9H0R3 208 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 IGKV1D-17A0A075B6S4 117 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 MUC21A0A0G2JKD1 596 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 MUC21A0A140T8X8 626 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 ELANEP08246 267 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 FAM3BP58499 235 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-208ENST00000508342 NDPQ00604 133 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 CD300EQ496F6 205 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-208ENST00000508342 DMKNQ6E0U4 476 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-208ENST00000508342 TMEM136Q6ZRR5 245 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 GPHB5Q86YW7 130 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 MSRB3Q8IXL7 192 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 GATD1Q8NB37 220 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 LINC00477Q96M19 166 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 C18orf15Q96N68 181 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 SLIRPQ9GZT3 109 aaKnown RBP2.36□□□□□ -2.03
NEDD4-208ENST00000508342 NIT2Q9NQR4 276 aa2.36□□□□□ -2.03
NEDD4-208ENST00000508342 A0A087X0K7 114 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 NHLRC4P0CG21 123 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-208ENST00000508342 NTF4P34130 210 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 MRPL23Q16540 153 aaKnown RBP2.35□□□□□ -2.03
NEDD4-208ENST00000508342 C9orf139Q6ZV77 190 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 GPHA2Q96T91 129 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 MS4A6AQ9H2W1 248 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 TRBV25-1A0A075B6N4 114 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 TRAV13-1A0A0B4J241 112 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 ATP6V0CP27449 155 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 Q6AWC8 147 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 SLC25A39Q9BZJ4 359 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-208ENST00000508342 A0A1B0GW15 77 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 IGKV1D-12P01611 117 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 HBDP02042 147 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 SFTA3P0C7M3 94 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 ESDP10768 282 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 SPNP16150 400 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 PPIFP30405 207 aaKnown RBP2.35□□□□□ -2.03
NEDD4-208ENST00000508342 INSL3P51460 131 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 KRTAP24-1Q3LI83 254 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 TIMM17AQ99595 171 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 RHODO00212 210 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 FSHBP01225 129 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 Q6Q795 121 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 OR11H7Q8NGC8 314 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 OR2K2Q8NGT1 345 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms