RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 A0A1B0GVG6 124 aa10.84□□□□□ -0.67
RNF4-210ENST00000508235 SERTM2A0A1B0GWG4 89 aa10.84□□□□□ -0.67
RNF4-210ENST00000508235 MAP1LC3B2A6NCE7 125 aa10.84□□□□□ -0.67
RNF4-210ENST00000508235 DIRC3C9JPN6 131 aa10.84□□□□□ -0.67
RNF4-210ENST00000508235 IGKV2D-40P01614 121 aaPredicted RBP10.84□□□□□ -0.67
RNF4-210ENST00000508235 NMBP08949 121 aa10.84□□□□□ -0.67
RNF4-210ENST00000508235 RRN3P1Q2M238 152 aa10.84□□□□□ -0.67
RNF4-210ENST00000508235 SSX7Q7RTT5 188 aa10.84□□□□□ -0.67
RNF4-210ENST00000508235 C11orf45Q8TAV5 145 aa10.84□□□□□ -0.67
RNF4-210ENST00000508235 MAP1LC3BQ9GZQ8 125 aa10.84□□□□□ -0.67
RNF4-210ENST00000508235 A0A1W2PRE2 83 aa10.83□□□□□ -0.68
RNF4-210ENST00000508235 K7EQM0 130 aa10.83□□□□□ -0.68
RNF4-210ENST00000508235 DEFB4AO15263 64 aa10.83□□□□□ -0.68
RNF4-210ENST00000508235 RBMY1A1P0DJD3 496 aaKnown RBP10.83□□□□□ -0.68
RNF4-210ENST00000508235 RBMY1CP0DJD4 496 aa10.83□□□□□ -0.68
RNF4-210ENST00000508235 RAB5CP51148 216 aa10.83□□□□□ -0.68
RNF4-210ENST00000508235 ZNF138P52744 262 aa10.83□□□□□ -0.68
RNF4-210ENST00000508235 RBMY1FQ15415 496 aaKnown RBP10.83□□□□□ -0.68
RNF4-210ENST00000508235 SLC51BQ86UW2 128 aa10.83□□□□□ -0.68
RNF4-210ENST00000508235 C5orf17Q8NAS9 161 aa10.83□□□□□ -0.68
RNF4-210ENST00000508235 TMED6Q8WW62 240 aa10.83□□□□□ -0.68
RNF4-210ENST00000508235 LINC01587Q99440 93 aa10.83□□□□□ -0.68
RNF4-210ENST00000508235 VGLL1Q99990 258 aa10.83□□□□□ -0.68
RNF4-210ENST00000508235 NKX6-2Q9C056 277 aaPredicted RBP10.83□□□□□ -0.68
RNF4-210ENST00000508235 ZNF492Q9P255 531 aa10.83□□□□□ -0.68
RNF4-210ENST00000508235 TEX48A0A1B0GUV7 120 aa10.82□□□□□ -0.68
RNF4-210ENST00000508235 H7BYZ3 331 aa10.82□□□□□ -0.68
RNF4-210ENST00000508235 CRISP2P16562 243 aa10.82□□□□□ -0.68
RNF4-210ENST00000508235 TAS2R60P59551 318 aa10.82□□□□□ -0.68
RNF4-210ENST00000508235 CASC10Q5T4H9 136 aa10.82□□□□□ -0.68
RNF4-210ENST00000508235 FAM213BQ8TBF2 198 aa10.82□□□□□ -0.68
RNF4-210ENST00000508235 FAM19A4Q96LR4 140 aa10.82□□□□□ -0.68
RNF4-210ENST00000508235 RPH3ALQ9UNE2 315 aa10.82□□□□□ -0.68
RNF4-210ENST00000508235 LENEPQ9Y5L5 61 aa10.82□□□□□ -0.68
RNF4-210ENST00000508235 LOC102723971A0A1B0GUV8 181 aa10.81□□□□□ -0.68
RNF4-210ENST00000508235 C7orf71A4D174 169 aa10.81□□□□□ -0.68
RNF4-210ENST00000508235 CXorf65A6NEN9 183 aa10.81□□□□□ -0.68
RNF4-210ENST00000508235 KLLNB2CW77 178 aa10.81□□□□□ -0.68
RNF4-210ENST00000508235 GPX1P07203 203 aa10.81□□□□□ -0.68
RNF4-210ENST00000508235 FGF8P55075 233 aaPredicted RBP10.81□□□□□ -0.68
RNF4-210ENST00000508235 CD300CQ08708 224 aa10.81□□□□□ -0.68
RNF4-210ENST00000508235 GFI1BQ5VTD9 330 aa10.81□□□□□ -0.68
RNF4-210ENST00000508235 C9orf62Q8N4C0 152 aa10.81□□□□□ -0.68
RNF4-210ENST00000508235 NIPSNAP3BQ9BS92 247 aa10.81□□□□□ -0.68
RNF4-210ENST00000508235 STAB2Q8WWQ8 2551 aa10.81□□□□□ -0.68
RNF4-210ENST00000508235 NUPR2A6NF83 97 aa10.8□□□□□ -0.68
RNF4-210ENST00000508235 J3KRW8 73 aa10.8□□□□□ -0.68
RNF4-210ENST00000508235 FHITP49789 147 aa10.8□□□□□ -0.68
RNF4-210ENST00000508235 SUMO1P63165 101 aaKnown RBP10.8□□□□□ -0.68
RNF4-210ENST00000508235 ZFAND6Q6FIF0 208 aa10.8□□□□□ -0.68
RNF4-210ENST00000508235 GOLT1AQ6ZVE7 132 aa10.8□□□□□ -0.68
RNF4-210ENST00000508235 SFT2D1Q8WV19 159 aa10.8□□□□□ -0.68
RNF4-210ENST00000508235 MBD3L1Q8WWY6 194 aa10.8□□□□□ -0.68
RNF4-210ENST00000508235 TRAV12-3A0A0B4J271 114 aa10.79□□□□□ -0.68
RNF4-210ENST00000508235 FBLL1A6NHQ2 334 aaKnown RBP10.79□□□□□ -0.68
RNF4-210ENST00000508235 ZNF705GA8MUZ8 300 aaPredicted RBP10.79□□□□□ -0.68
RNF4-210ENST00000508235 TEX46H3BTG2 121 aa10.79□□□□□ -0.68
RNF4-210ENST00000508235 TCRAP04437 139 aa10.79□□□□□ -0.68
RNF4-210ENST00000508235 H2AFB1P0C5Y9 115 aa10.79□□□□□ -0.68
RNF4-210ENST00000508235 SPART-AS1P0CW21 52 aa10.79□□□□□ -0.68
RNF4-210ENST00000508235 ZNF493Q6ZR52 646 aa10.79□□□□□ -0.68
RNF4-210ENST00000508235 CCDC28AQ8IWP9 274 aa10.79□□□□□ -0.68
RNF4-210ENST00000508235 PYGO2Q9BRQ0 406 aa10.79□□□□□ -0.68
RNF4-210ENST00000508235 TMPRSS5Q9H3S3 457 aa10.79□□□□□ -0.68
RNF4-210ENST00000508235 PLA2G2EQ9NZK7 142 aa10.79□□□□□ -0.68
RNF4-210ENST00000508235 EPDR1Q9UM22 224 aa10.79□□□□□ -0.68
RNF4-210ENST00000508235 ARL2-SNX15V9GYD0 113 aa10.79□□□□□ -0.68
RNF4-210ENST00000508235 GGTLC3B5MD39 225 aa10.78□□□□□ -0.68
RNF4-210ENST00000508235 RNASE4P34096 147 aaKnown RBP10.78□□□□□ -0.68
RNF4-210ENST00000508235 PPT1P50897 306 aa10.78□□□□□ -0.68
RNF4-210ENST00000508235 EMP1P54849 157 aa10.78□□□□□ -0.68
RNF4-210ENST00000508235 UBE2G2P60604 165 aa10.78□□□□□ -0.68
RNF4-210ENST00000508235 GNG5P63218 68 aa10.78□□□□□ -0.68
RNF4-210ENST00000508235 KIR3DS1Q14943 382 aa10.78□□□□□ -0.68
RNF4-210ENST00000508235 ZFAND2AQ8N6M9 145 aa10.78□□□□□ -0.68
RNF4-210ENST00000508235 Q8TAT8 98 aa10.78□□□□□ -0.68
RNF4-210ENST00000508235 C16orf74Q96GX8 76 aa10.78□□□□□ -0.68
RNF4-210ENST00000508235 TCEAL7Q9BRU2 100 aa10.78□□□□□ -0.68
RNF4-210ENST00000508235 ATG101Q9BSB4 218 aa10.78□□□□□ -0.68
RNF4-210ENST00000508235 NDFIP1Q9BT67 221 aa10.78□□□□□ -0.68
RNF4-210ENST00000508235 HUWE1Q7Z6Z7 4374 aaKnown RBP10.78□□□□□ -0.68
RNF4-210ENST00000508235 FAM74A7A6NL05 159 aa10.77□□□□□ -0.69
RNF4-210ENST00000508235 C11orf94C9JXX5 98 aa10.77□□□□□ -0.69
RNF4-210ENST00000508235 IFNA7P01567 189 aa10.77□□□□□ -0.69
RNF4-210ENST00000508235 HTN1P15515 57 aa10.77□□□□□ -0.69
RNF4-210ENST00000508235 SULT1A2P50226 295 aa10.77□□□□□ -0.69
RNF4-210ENST00000508235 NANOS2P60321 138 aaKnown RBP10.77□□□□□ -0.69
RNF4-210ENST00000508235 PMS2P11Q13670 270 aa10.77□□□□□ -0.69
RNF4-210ENST00000508235 CYB561D1Q8N8Q1 229 aa10.77□□□□□ -0.69
RNF4-210ENST00000508235 TMEM263Q8WUH6 116 aaKnown RBP10.77□□□□□ -0.69
RNF4-210ENST00000508235 KLK5Q9Y337 293 aaPredicted RBP10.77□□□□□ -0.69
RNF4-210ENST00000508235 YTHDF2Q9Y5A9 579 aaKnown RBP10.77□□□□□ -0.69
RNF4-210ENST00000508235 F6UZH7 168 aa10.76□□□□□ -0.69
RNF4-210ENST00000508235 BTN1A1Q13410 526 aa10.76□□□□□ -0.69
RNF4-210ENST00000508235 CST9LP1Q5W188 147 aa10.76□□□□□ -0.69
RNF4-210ENST00000508235 CEMP1Q6PRD7 247 aaPredicted RBP10.76□□□□□ -0.69
RNF4-210ENST00000508235 PHLDA1Q8WV24 401 aaPredicted RBP10.76□□□□□ -0.69
RNF4-210ENST00000508235 HIST1H2BAQ96A08 127 aa10.76□□□□□ -0.69
RNF4-210ENST00000508235 DKK2Q9UBU2 259 aa10.76□□□□□ -0.69
RNF4-210ENST00000508235 TRAV1-1A0A0B4J248 108 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms