RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 SSMEM1Q8WWF3 244 aa8.4□□□□□ -1.07
PDLIM5-210ENST00000508216 Q96MF0 132 aa8.4□□□□□ -1.07
PDLIM5-210ENST00000508216 CUL9Q8IWT3 2517 aa8.4□□□□□ -1.07
PDLIM5-210ENST00000508216 TNRC6BQ9UPQ9 1833 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-210ENST00000508216 A0A1W2PQD3 144 aa8.39□□□□□ -1.07
PDLIM5-210ENST00000508216 LMO7DNF2Z398 122 aa8.39□□□□□ -1.07
PDLIM5-210ENST00000508216 CFC1BP0CG36 223 aa8.39□□□□□ -1.07
PDLIM5-210ENST00000508216 CFC1P0CG37 223 aa8.39□□□□□ -1.07
PDLIM5-210ENST00000508216 LIFP15018 202 aa8.39□□□□□ -1.07
PDLIM5-210ENST00000508216 CRIP2P52943 208 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-210ENST00000508216 ERVK-16P61578 105 aa8.39□□□□□ -1.07
PDLIM5-210ENST00000508216 PRR15Q8IV56 129 aa8.39□□□□□ -1.07
PDLIM5-210ENST00000508216 C10orf105Q8TEF2 133 aa8.39□□□□□ -1.07
PDLIM5-210ENST00000508216 FOXB1Q99853 325 aa8.39□□□□□ -1.07
PDLIM5-210ENST00000508216 TRAV26-2A0A0B4J265 109 aa8.38□□□□□ -1.07
PDLIM5-210ENST00000508216 F8W735 103 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-210ENST00000508216 SCRG1O75711 98 aa8.38□□□□□ -1.07
PDLIM5-210ENST00000508216 WISP1O95388 367 aa8.38□□□□□ -1.07
PDLIM5-210ENST00000508216 LINC00473A8K010 186 aa8.38□□□□□ -1.07
PDLIM5-210ENST00000508216 IGHV3-33P01772 117 aa8.38□□□□□ -1.07
PDLIM5-210ENST00000508216 COX6B1P14854 86 aa8.38□□□□□ -1.07
PDLIM5-210ENST00000508216 DLX1P56177 255 aa8.38□□□□□ -1.07
PDLIM5-210ENST00000508216 FGF12P61328 243 aa8.38□□□□□ -1.07
PDLIM5-210ENST00000508216 PCOLCEQ15113 449 aa8.38□□□□□ -1.07
PDLIM5-210ENST00000508216 IGFL2Q6UWQ7 119 aa8.38□□□□□ -1.07
PDLIM5-210ENST00000508216 C2orf82Q6UX34 121 aa8.38□□□□□ -1.07
PDLIM5-210ENST00000508216 PLXDC1Q8IUK5 500 aa8.38□□□□□ -1.07
PDLIM5-210ENST00000508216 LINC00482Q8N8I6 264 aa8.38□□□□□ -1.07
PDLIM5-210ENST00000508216 WFDC5Q8TCV5 224 aa8.38□□□□□ -1.07
PDLIM5-210ENST00000508216 FAM167A-AS1Q96KT0 104 aa8.38□□□□□ -1.07
PDLIM5-210ENST00000508216 SNRNP200O75643 2136 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-210ENST00000508216 ADAMTS20P59510 1910 aa8.37□□□□□ -1.07
PDLIM5-210ENST00000508216 MYOFQ9NZM1 2061 aa8.37□□□□□ -1.07
PDLIM5-210ENST00000508216 PRSS1P07477 247 aa8.37□□□□□ -1.07
PDLIM5-210ENST00000508216 IGLV3-21P80748 117 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-210ENST00000508216 D6R8Y8 96 aa8.36□□□□□ -1.07
PDLIM5-210ENST00000508216 GP1BBP13224 206 aa8.36□□□□□ -1.07
PDLIM5-210ENST00000508216 HILS1P60008 231 aa8.36□□□□□ -1.07
PDLIM5-210ENST00000508216 CFHR3Q02985 330 aa8.36□□□□□ -1.07
PDLIM5-210ENST00000508216 FP248Q71RG6 208 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-210ENST00000508216 FGFBP3Q8TAT2 258 aa8.36□□□□□ -1.07
PDLIM5-210ENST00000508216 ZNF524Q96C55 264 aa8.36□□□□□ -1.07
PDLIM5-210ENST00000508216 FOXC2Q99958 501 aa8.36□□□□□ -1.07
PDLIM5-210ENST00000508216 SRXN1Q9BYN0 137 aa8.36□□□□□ -1.07
PDLIM5-210ENST00000508216 SLC25A15Q9Y619 301 aa8.36□□□□□ -1.07
PDLIM5-210ENST00000508216 ARID1BQ8NFD5 2236 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-210ENST00000508216 ALPK2Q86TB3 2170 aa8.36□□□□□ -1.07
PDLIM5-210ENST00000508216 SZT2Q5T011 3432 aa8.36□□□□□ -1.07
PDLIM5-210ENST00000508216 A0A0C4DFX4 3053 aa8.35□□□□□ -1.07
PDLIM5-210ENST00000508216 TRAV40A0A0B4J280 105 aa8.35□□□□□ -1.07
PDLIM5-210ENST00000508216 TRBV7-6A0A0J9YX20 115 aa8.35□□□□□ -1.07
PDLIM5-210ENST00000508216 CGB1A6NKQ9 187 aa8.35□□□□□ -1.07
PDLIM5-210ENST00000508216 F8VRH5 84 aa8.35□□□□□ -1.07
PDLIM5-210ENST00000508216 LYZL6O75951 148 aa8.35□□□□□ -1.07
PDLIM5-210ENST00000508216 IGHV3-30P01768 117 aa8.35□□□□□ -1.07
PDLIM5-210ENST00000508216 IGHV3-30-5P0DP03 117 aa8.35□□□□□ -1.07
PDLIM5-210ENST00000508216 DUTP33316 252 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-210ENST00000508216 Q6ZS46 218 aa8.35□□□□□ -1.07
PDLIM5-210ENST00000508216 MKXQ8IYA7 352 aa8.35□□□□□ -1.07
PDLIM5-210ENST00000508216 RNF182Q8N6D2 247 aa8.35□□□□□ -1.07
PDLIM5-210ENST00000508216 DAND5Q8N907 189 aa8.35□□□□□ -1.07
PDLIM5-210ENST00000508216 PCBD1P61457 104 aa8.35□□□□□ -1.07
PDLIM5-210ENST00000508216 ERCC8Q13216 396 aa8.35□□□□□ -1.07
PDLIM5-210ENST00000508216 LINC00322Q6ZN03 302 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-210ENST00000508216 OTORQ9NRC9 128 aa8.35□□□□□ -1.07
PDLIM5-210ENST00000508216 MRPL35Q9NZE8 188 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-210ENST00000508216 TET1Q8NFU7 2136 aa8.34□□□□□ -1.07
PDLIM5-210ENST00000508216 LRRK1Q38SD2 2015 aa8.34□□□□□ -1.07
PDLIM5-210ENST00000508216 TRBV7-1A0A0A6YYK4 115 aa8.34□□□□□ -1.07
PDLIM5-210ENST00000508216 KNCNA6PVL3 124 aa8.34□□□□□ -1.07
PDLIM5-210ENST00000508216 BUB3O43684 328 aa8.34□□□□□ -1.07
PDLIM5-210ENST00000508216 ZNF22P17026 224 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-210ENST00000508216 ZNF714Q96N38 554 aa8.34□□□□□ -1.07
PDLIM5-210ENST00000508216 H7C423 109 aa8.33□□□□□ -1.08
PDLIM5-210ENST00000508216 ARMS2P0C7Q2 107 aa8.33□□□□□ -1.08
PDLIM5-210ENST00000508216 ATP5EP56381 51 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-210ENST00000508216 SYNJ2BPP57105 145 aa8.33□□□□□ -1.08
PDLIM5-210ENST00000508216 BRK1Q8WUW1 75 aa8.33□□□□□ -1.08
PDLIM5-210ENST00000508216 COX14Q96I36 57 aa8.33□□□□□ -1.08
PDLIM5-210ENST00000508216 PAXXQ9BUH6 204 aa8.33□□□□□ -1.08
PDLIM5-210ENST00000508216 GNG12Q9UBI6 72 aa8.33□□□□□ -1.08
PDLIM5-210ENST00000508216 MYO7AQ13402 2215 aa8.33□□□□□ -1.08
PDLIM5-210ENST00000508216 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-210ENST00000508216 A0A0J9YY99 117 aa8.33□□□□□ -1.08
PDLIM5-210ENST00000508216 TEX22C9J3V5 150 aa8.33□□□□□ -1.08
PDLIM5-210ENST00000508216 STATHP02808 62 aa8.33□□□□□ -1.08
PDLIM5-210ENST00000508216 PMS2CLQ68D20 193 aa8.33□□□□□ -1.08
PDLIM5-210ENST00000508216 ZCCHC24Q8N2G6 241 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-210ENST00000508216 SMCR5Q8TEV8 140 aa8.33□□□□□ -1.08
PDLIM5-210ENST00000508216 TMEM263Q8WUH6 116 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-210ENST00000508216 RNF7Q9UBF6 113 aa8.33□□□□□ -1.08
PDLIM5-210ENST00000508216 GON4LQ3T8J9 2241 aa8.32□□□□□ -1.08
PDLIM5-210ENST00000508216 TRAV41A0A0B4J266 112 aa8.32□□□□□ -1.08
PDLIM5-210ENST00000508216 BCE1O60756 84 aa8.32□□□□□ -1.08
PDLIM5-210ENST00000508216 DEFB134Q4QY38 66 aa8.32□□□□□ -1.08
PDLIM5-210ENST00000508216 C9orf139Q6ZV77 190 aa8.32□□□□□ -1.08
PDLIM5-210ENST00000508216 SLC25A29Q8N8R3 303 aa8.32□□□□□ -1.08
PDLIM5-210ENST00000508216 SPTSSAQ969W0 71 aa8.32□□□□□ -1.08
PDLIM5-210ENST00000508216 CACNA1IQ9P0X4 2223 aa8.31□□□□□ -1.08
PDLIM5-210ENST00000508216 COL6A3P12111 3177 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms