RNA–Protein interactions for RNA: ENST00000507902.5

PTPN13-206, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 4

Gene PTPN13, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-206ENST00000507902 TCTAP57738 103 aa9.97□□□□□ -0.81
PTPN13-206ENST00000507902 ZNF493Q6ZR52 646 aa9.97□□□□□ -0.81
PTPN13-206ENST00000507902 C16orf74Q96GX8 76 aa9.97□□□□□ -0.81
PTPN13-206ENST00000507902 TRAV10A0A0B4J240 114 aa9.96□□□□□ -0.82
PTPN13-206ENST00000507902 CTXND1A0A1B0GTU2 59 aa9.96□□□□□ -0.82
PTPN13-206ENST00000507902 SERTM2A0A1B0GWG4 89 aa9.96□□□□□ -0.82
PTPN13-206ENST00000507902 HMGB3O15347 200 aaKnown RBP9.96□□□□□ -0.82
PTPN13-206ENST00000507902 BCL2L11O43521 198 aa9.96□□□□□ -0.82
PTPN13-206ENST00000507902 PFDN1O60925 122 aa9.96□□□□□ -0.82
PTPN13-206ENST00000507902 GFI1BQ5VTD9 330 aa9.96□□□□□ -0.82
PTPN13-206ENST00000507902 CCDC28AQ8IWP9 274 aa9.96□□□□□ -0.82
PTPN13-206ENST00000507902 TCTE3Q8IZS6 198 aa9.96□□□□□ -0.82
PTPN13-206ENST00000507902 C2CD4CQ8TF44 421 aa9.96□□□□□ -0.82
PTPN13-206ENST00000507902 YTHDF2Q9Y5A9 579 aaKnown RBP9.96□□□□□ -0.82
PTPN13-206ENST00000507902 STARD9Q9P2P6 4700 aa9.95□□□□□ -0.82
PTPN13-206ENST00000507902 IGKV2-40A0A087WW87 121 aaPredicted RBP9.95□□□□□ -0.82
PTPN13-206ENST00000507902 LCE6AA0A183 80 aa9.95□□□□□ -0.82
PTPN13-206ENST00000507902 C7orf71A4D174 169 aa9.95□□□□□ -0.82
PTPN13-206ENST00000507902 LYRM9A8MSI8 78 aa9.95□□□□□ -0.82
PTPN13-206ENST00000507902 K7EQM0 130 aa9.95□□□□□ -0.82
PTPN13-206ENST00000507902 IGKV2D-40P01614 121 aaPredicted RBP9.95□□□□□ -0.82
PTPN13-206ENST00000507902 CRISP2P16562 243 aa9.95□□□□□ -0.82
PTPN13-206ENST00000507902 GCHFRP30047 84 aa9.95□□□□□ -0.82
PTPN13-206ENST00000507902 ZNF138P52744 262 aa9.95□□□□□ -0.82
PTPN13-206ENST00000507902 Q6ZNX1 250 aa9.95□□□□□ -0.82
PTPN13-206ENST00000507902 TMEM263Q8WUH6 116 aaKnown RBP9.95□□□□□ -0.82
PTPN13-206ENST00000507902 TMED6Q8WW62 240 aa9.95□□□□□ -0.82
PTPN13-206ENST00000507902 HYLS1Q96M11 299 aa9.95□□□□□ -0.82
PTPN13-206ENST00000507902 PYGO2Q9BRQ0 406 aa9.95□□□□□ -0.82
PTPN13-206ENST00000507902 AGPAT4-IT1Q9H0P7 198 aa9.95□□□□□ -0.82
PTPN13-206ENST00000507902 DKK2Q9UBU2 259 aa9.95□□□□□ -0.82
PTPN13-206ENST00000507902 LENEPQ9Y5L5 61 aa9.95□□□□□ -0.82
PTPN13-206ENST00000507902 KMT2CQ8NEZ4 4911 aaKnown RBP9.95□□□□□ -0.82
PTPN13-206ENST00000507902 PGPA6NDG6 321 aa9.94□□□□□ -0.82
PTPN13-206ENST00000507902 ZNF705GA8MUZ8 300 aaPredicted RBP9.94□□□□□ -0.82
PTPN13-206ENST00000507902 KLLNB2CW77 178 aa9.94□□□□□ -0.82
PTPN13-206ENST00000507902 UMAD1C9J7I0 102 aa9.94□□□□□ -0.82
PTPN13-206ENST00000507902 DIRC3C9JPN6 131 aa9.94□□□□□ -0.82
PTPN13-206ENST00000507902 GPX1P07203 203 aa9.94□□□□□ -0.82
PTPN13-206ENST00000507902 PRB4P10163 310 aaPredicted RBP9.94□□□□□ -0.82
PTPN13-206ENST00000507902 ERCC8Q13216 396 aa9.94□□□□□ -0.82
PTPN13-206ENST00000507902 FAM222AQ5U5X8 452 aa9.94□□□□□ -0.82
PTPN13-206ENST00000507902 Q6ZTC4 211 aa9.94□□□□□ -0.82
PTPN13-206ENST00000507902 IQCF2Q8IXL9 164 aa9.94□□□□□ -0.82
PTPN13-206ENST00000507902 OR11H4Q8NGC9 324 aa9.94□□□□□ -0.82
PTPN13-206ENST00000507902 ST6GAL2Q96JF0 529 aa9.94□□□□□ -0.82
PTPN13-206ENST00000507902 FAM19A4Q96LR4 140 aa9.94□□□□□ -0.82
PTPN13-206ENST00000507902 ZNF471Q9BX82 626 aaPredicted RBP9.94□□□□□ -0.82
PTPN13-206ENST00000507902 CYTL1Q9NRR1 136 aa9.94□□□□□ -0.82
PTPN13-206ENST00000507902 ZNF492Q9P255 531 aa9.94□□□□□ -0.82
PTPN13-206ENST00000507902 CELA1Q9UNI1 258 aa9.94□□□□□ -0.82
PTPN13-206ENST00000507902 TRAV12-3A0A0B4J271 114 aa9.93□□□□□ -0.82
PTPN13-206ENST00000507902 J3KRW8 73 aa9.93□□□□□ -0.82
PTPN13-206ENST00000507902 SEC11BP0C7V7 166 aa9.93□□□□□ -0.82
PTPN13-206ENST00000507902 TPT1P13693 172 aaKnown RBP9.93□□□□□ -0.82
PTPN13-206ENST00000507902 HTN1P15515 57 aa9.93□□□□□ -0.82
PTPN13-206ENST00000507902 C12orf74Q32Q52 190 aa9.93□□□□□ -0.82
PTPN13-206ENST00000507902 EIF5AL1Q6IS14 154 aaKnown RBP9.93□□□□□ -0.82
PTPN13-206ENST00000507902 C5orf17Q8NAS9 161 aa9.93□□□□□ -0.82
PTPN13-206ENST00000507902 ZNF680Q8NEM1 530 aa9.93□□□□□ -0.82
PTPN13-206ENST00000507902 STOML3Q8TAV4 291 aa9.93□□□□□ -0.82
PTPN13-206ENST00000507902 SUN5Q8TC36 379 aa9.93□□□□□ -0.82
PTPN13-206ENST00000507902 VGLL1Q99990 258 aa9.93□□□□□ -0.82
PTPN13-206ENST00000507902 NKX6-2Q9C056 277 aaPredicted RBP9.93□□□□□ -0.82
PTPN13-206ENST00000507902 DEFB131BA0A096LNP1 70 aa9.92□□□□□ -0.82
PTPN13-206ENST00000507902 FBLL1A6NHQ2 334 aaKnown RBP9.92□□□□□ -0.82
PTPN13-206ENST00000507902 EIF3GO75821 320 aaKnown RBP eCLIP9.92□□□□□ -0.82
PTPN13-206ENST00000507902 DAD1P61803 113 aa9.92□□□□□ -0.82
PTPN13-206ENST00000507902 AKAP14Q86UN6 197 aa9.92□□□□□ -0.82
PTPN13-206ENST00000507902 NDFIP1Q9BT67 221 aa9.92□□□□□ -0.82
PTPN13-206ENST00000507902 RPH3ALQ9UNE2 315 aa9.92□□□□□ -0.82
PTPN13-206ENST00000507902 TIMM8BQ9Y5J9 83 aaPredicted RBP9.92□□□□□ -0.82
PTPN13-206ENST00000507902 A0A1W2PRE2 83 aa9.91□□□□□ -0.82
PTPN13-206ENST00000507902 MAP1LC3B2A6NCE7 125 aa9.91□□□□□ -0.82
PTPN13-206ENST00000507902 SNURFLB1AK76 121 aa9.91□□□□□ -0.82
PTPN13-206ENST00000507902 C1QBP02746 253 aa9.91□□□□□ -0.82
PTPN13-206ENST00000507902 RNASE4P34096 147 aaKnown RBP9.91□□□□□ -0.82
PTPN13-206ENST00000507902 DPPA3Q6W0C5 159 aa9.91□□□□□ -0.82
PTPN13-206ENST00000507902 TMUB2Q71RG4 321 aa9.91□□□□□ -0.82
PTPN13-206ENST00000507902 RNASE8Q8TDE3 154 aaKnown RBP9.91□□□□□ -0.82
PTPN13-206ENST00000507902 FAM210BQ96KR6 192 aa9.91□□□□□ -0.82
PTPN13-206ENST00000507902 LINC00467Q9BRT7 94 aa9.91□□□□□ -0.82
PTPN13-206ENST00000507902 MAP1LC3BQ9GZQ8 125 aa9.91□□□□□ -0.82
PTPN13-206ENST00000507902 BTN1A1Q13410 526 aa9.9□□□□□ -0.82
PTPN13-206ENST00000507902 KIR3DS1Q14943 382 aa9.9□□□□□ -0.82
PTPN13-206ENST00000507902 GOLT1AQ6ZVE7 132 aa9.9□□□□□ -0.82
PTPN13-206ENST00000507902 ZFAND2AQ8N6M9 145 aa9.9□□□□□ -0.82
PTPN13-206ENST00000507902 Q8TAT8 98 aa9.9□□□□□ -0.82
PTPN13-206ENST00000507902 BOLA1Q9Y3E2 137 aa9.9□□□□□ -0.82
PTPN13-206ENST00000507902 IGLL5B9A064 214 aa9.89□□□□□ -0.83
PTPN13-206ENST00000507902 RGS13O14921 159 aa9.89□□□□□ -0.83
PTPN13-206ENST00000507902 TCRAP04437 139 aa9.89□□□□□ -0.83
PTPN13-206ENST00000507902 ZNF726P1Q15940 193 aa9.89□□□□□ -0.83
PTPN13-206ENST00000507902 ZNF767PQ75MW2 155 aa9.89□□□□□ -0.83
PTPN13-206ENST00000507902 EIF4E3Q8N5X7 224 aaKnown RBP9.89□□□□□ -0.83
PTPN13-206ENST00000507902 CYB561D1Q8N8Q1 229 aa9.89□□□□□ -0.83
PTPN13-206ENST00000507902 TCEAL7Q9BRU2 100 aa9.89□□□□□ -0.83
PTPN13-206ENST00000507902 ATG101Q9BSB4 218 aa9.89□□□□□ -0.83
PTPN13-206ENST00000507902 ARL2-SNX15V9GYD0 113 aa9.89□□□□□ -0.83
PTPN13-206ENST00000507902 hCG_2014768A0A024R1R8 64 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms