RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 C20orf144Q9BQM9 153 aa14.34□□□□□ -0.11
SNX25-204ENST00000506896 RBAKDNA6NC62 111 aa14.33□□□□□ -0.12
SNX25-204ENST00000506896 UMAD1C9J7I0 102 aa14.33□□□□□ -0.12
SNX25-204ENST00000506896 DEFB4AO15263 64 aa14.33□□□□□ -0.12
SNX25-204ENST00000506896 TMEM78Q5T7P6 136 aa14.33□□□□□ -0.12
SNX25-204ENST00000506896 C11orf45Q8TAV5 145 aa14.33□□□□□ -0.12
SNX25-204ENST00000506896 CMTM2Q8TAZ6 248 aa14.33□□□□□ -0.12
SNX25-204ENST00000506896 LCE6AA0A183 80 aa14.32□□□□□ -0.12
SNX25-204ENST00000506896 SLC25A5P05141 298 aaKnown RBP14.32□□□□□ -0.12
SNX25-204ENST00000506896 TPT1P13693 172 aaKnown RBP14.32□□□□□ -0.12
SNX25-204ENST00000506896 AGPAT4-IT1Q9H0P7 198 aa14.32□□□□□ -0.12
SNX25-204ENST00000506896 IGKV2-40A0A087WW87 121 aaPredicted RBP14.31□□□□□ -0.12
SNX25-204ENST00000506896 PGPA6NDG6 321 aa14.31□□□□□ -0.12
SNX25-204ENST00000506896 DIRC3C9JPN6 131 aa14.31□□□□□ -0.12
SNX25-204ENST00000506896 IGKV2D-40P01614 121 aaPredicted RBP14.31□□□□□ -0.12
SNX25-204ENST00000506896 ERCC8Q13216 396 aa14.31□□□□□ -0.12
SNX25-204ENST00000506896 ZNF726P1Q15940 193 aa14.31□□□□□ -0.12
SNX25-204ENST00000506896 RRN3P1Q2M238 152 aa14.31□□□□□ -0.12
SNX25-204ENST00000506896 SSX7Q7RTT5 188 aa14.31□□□□□ -0.12
SNX25-204ENST00000506896 STOML3Q8TAV4 291 aa14.31□□□□□ -0.12
SNX25-204ENST00000506896 TRBV7-9A0A0J9YWB2 115 aa14.3□□□□□ -0.12
SNX25-204ENST00000506896 NMBP08949 121 aa14.3□□□□□ -0.12
SNX25-204ENST00000506896 LGALSLQ3ZCW2 172 aaPredicted RBP14.3□□□□□ -0.12
SNX25-204ENST00000506896 FAM19A4Q96LR4 140 aa14.3□□□□□ -0.12
SNX25-204ENST00000506896 CXorf65A6NEN9 183 aa14.29□□□□□ -0.12
SNX25-204ENST00000506896 H7BYZ3 331 aa14.29□□□□□ -0.12
SNX25-204ENST00000506896 CRISP2P16562 243 aa14.29□□□□□ -0.12
SNX25-204ENST00000506896 TAS2R60P59551 318 aa14.29□□□□□ -0.12
SNX25-204ENST00000506896 GFI1BQ5VTD9 330 aa14.29□□□□□ -0.12
SNX25-204ENST00000506896 IQCF2Q8IXL9 164 aa14.29□□□□□ -0.12
SNX25-204ENST00000506896 LINC01587Q99440 93 aa14.29□□□□□ -0.12
SNX25-204ENST00000506896 VGLL1Q99990 258 aa14.29□□□□□ -0.12
SNX25-204ENST00000506896 ZNF492Q9P255 531 aa14.29□□□□□ -0.12
SNX25-204ENST00000506896 HYDINQ4G0P3 5121 aa14.29□□□□□ -0.12
SNX25-204ENST00000506896 TEX48A0A1B0GUV7 120 aa14.28□□□□□ -0.12
SNX25-204ENST00000506896 LOC102723971A0A1B0GUV8 181 aa14.28□□□□□ -0.12
SNX25-204ENST00000506896 MAP1LC3B2A6NCE7 125 aa14.28□□□□□ -0.12
SNX25-204ENST00000506896 ZNF138P52744 262 aa14.28□□□□□ -0.12
SNX25-204ENST00000506896 EIF5AL1Q6IS14 154 aaKnown RBP14.28□□□□□ -0.12
SNX25-204ENST00000506896 DPPA3Q6W0C5 159 aa14.28□□□□□ -0.12
SNX25-204ENST00000506896 TMED6Q8WW62 240 aa14.28□□□□□ -0.12
SNX25-204ENST00000506896 MAP1LC3BQ9GZQ8 125 aa14.28□□□□□ -0.12
SNX25-204ENST00000506896 SERTM2A0A1B0GWG4 89 aa14.27□□□□□ -0.13
SNX25-204ENST00000506896 A0A1W2PRE2 83 aa14.27□□□□□ -0.13
SNX25-204ENST00000506896 NUPR2A6NF83 97 aa14.27□□□□□ -0.13
SNX25-204ENST00000506896 KLLNB2CW77 178 aa14.27□□□□□ -0.13
SNX25-204ENST00000506896 PMS2P11Q13670 270 aa14.27□□□□□ -0.13
SNX25-204ENST00000506896 ZFP69Q49AA0 526 aa14.27□□□□□ -0.13
SNX25-204ENST00000506896 C5orf17Q8NAS9 161 aa14.27□□□□□ -0.13
SNX25-204ENST00000506896 NIPSNAP3BQ9BS92 247 aa14.27□□□□□ -0.13
SNX25-204ENST00000506896 LENEPQ9Y5L5 61 aa14.27□□□□□ -0.13
SNX25-204ENST00000506896 ALMS1Q8TCU4 4167 aa14.26□□□□□ -0.13
SNX25-204ENST00000506896 A0A1B0GVG6 124 aa14.26□□□□□ -0.13
SNX25-204ENST00000506896 J3KRW8 73 aa14.26□□□□□ -0.13
SNX25-204ENST00000506896 NANOS2P60321 138 aaKnown RBP14.26□□□□□ -0.13
SNX25-204ENST00000506896 KIR3DS1Q14943 382 aa14.26□□□□□ -0.13
SNX25-204ENST00000506896 NKX6-2Q9C056 277 aaPredicted RBP14.26□□□□□ -0.13
SNX25-204ENST00000506896 C7orf71A4D174 169 aa14.25□□□□□ -0.13
SNX25-204ENST00000506896 ZNF705GA8MUZ8 300 aaPredicted RBP14.25□□□□□ -0.13
SNX25-204ENST00000506896 GPX1P07203 203 aa14.25□□□□□ -0.13
SNX25-204ENST00000506896 SPART-AS1P0CW21 52 aa14.25□□□□□ -0.13
SNX25-204ENST00000506896 EMP1P54849 157 aa14.25□□□□□ -0.13
SNX25-204ENST00000506896 FGF8P55075 233 aaPredicted RBP14.25□□□□□ -0.13
SNX25-204ENST00000506896 SLC51BQ86UW2 128 aa14.25□□□□□ -0.13
SNX25-204ENST00000506896 RPH3ALQ9UNE2 315 aa14.25□□□□□ -0.13
SNX25-204ENST00000506896 TRAV12-3A0A0B4J271 114 aa14.24□□□□□ -0.13
SNX25-204ENST00000506896 GGTLC3B5MD39 225 aa14.24□□□□□ -0.13
SNX25-204ENST00000506896 K7EQM0 130 aa14.24□□□□□ -0.13
SNX25-204ENST00000506896 FHITP49789 147 aa14.24□□□□□ -0.13
SNX25-204ENST00000506896 SUMO1P63165 101 aaKnown RBP14.24□□□□□ -0.13
SNX25-204ENST00000506896 CEMP1Q6PRD7 247 aaPredicted RBP14.24□□□□□ -0.13
SNX25-204ENST00000506896 ZNF493Q6ZR52 646 aa14.24□□□□□ -0.13
SNX25-204ENST00000506896 GOLT1AQ6ZVE7 132 aa14.24□□□□□ -0.13
SNX25-204ENST00000506896 ZFAND2AQ8N6M9 145 aa14.24□□□□□ -0.13
SNX25-204ENST00000506896 Q8TAT8 98 aa14.24□□□□□ -0.13
SNX25-204ENST00000506896 FAM213BQ8TBF2 198 aa14.24□□□□□ -0.13
SNX25-204ENST00000506896 PHLDA1Q8WV24 401 aaPredicted RBP14.24□□□□□ -0.13
SNX25-204ENST00000506896 MBD3L1Q8WWY6 194 aa14.24□□□□□ -0.13
SNX25-204ENST00000506896 C16orf74Q96GX8 76 aa14.24□□□□□ -0.13
SNX25-204ENST00000506896 PYGO2Q9BRQ0 406 aa14.24□□□□□ -0.13
SNX25-204ENST00000506896 PLA2G2EQ9NZK7 142 aa14.24□□□□□ -0.13
SNX25-204ENST00000506896 KLK5Q9Y337 293 aaPredicted RBP14.24□□□□□ -0.13
SNX25-204ENST00000506896 C11orf94C9JXX5 98 aa14.23□□□□□ -0.13
SNX25-204ENST00000506896 TCRAP04437 139 aa14.23□□□□□ -0.13
SNX25-204ENST00000506896 RAB5CP51148 216 aa14.23□□□□□ -0.13
SNX25-204ENST00000506896 CD300CQ08708 224 aa14.23□□□□□ -0.13
SNX25-204ENST00000506896 CCDC28AQ8IWP9 274 aa14.23□□□□□ -0.13
SNX25-204ENST00000506896 C9orf62Q8N4C0 152 aa14.23□□□□□ -0.13
SNX25-204ENST00000506896 TMPRSS5Q9H3S3 457 aa14.23□□□□□ -0.13
SNX25-204ENST00000506896 DKK2Q9UBU2 259 aa14.23□□□□□ -0.13
SNX25-204ENST00000506896 EPDR1Q9UM22 224 aa14.23□□□□□ -0.13
SNX25-204ENST00000506896 CELA1Q9UNI1 258 aa14.23□□□□□ -0.13
SNX25-204ENST00000506896 YTHDF2Q9Y5A9 579 aaKnown RBP14.23□□□□□ -0.13
SNX25-204ENST00000506896 HTN1P15515 57 aa14.22□□□□□ -0.13
SNX25-204ENST00000506896 RNASE4P34096 147 aaKnown RBP14.22□□□□□ -0.13
SNX25-204ENST00000506896 GNG5P63218 68 aa14.22□□□□□ -0.13
SNX25-204ENST00000506896 TMEM263Q8WUH6 116 aaKnown RBP14.22□□□□□ -0.13
SNX25-204ENST00000506896 SFT2D1Q8WV19 159 aa14.22□□□□□ -0.13
SNX25-204ENST00000506896 ARL2-SNX15V9GYD0 113 aa14.22□□□□□ -0.13
SNX25-204ENST00000506896 FBLL1A6NHQ2 334 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms