RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 Q6ZR54 194 aa6.38□□□□□ -1.39
PDLIM5-209ENST00000506632 C15orf53Q8NAA6 179 aa6.38□□□□□ -1.39
PDLIM5-209ENST00000506632 FAM19A4Q96LR4 140 aa6.38□□□□□ -1.39
PDLIM5-209ENST00000506632 ATP5SQ99766 215 aa6.38□□□□□ -1.39
PDLIM5-209ENST00000506632 BATF3Q9NR55 127 aa6.38□□□□□ -1.39
PDLIM5-209ENST00000506632 KCNIP2Q9NS61 270 aa6.38□□□□□ -1.39
PDLIM5-209ENST00000506632 HSPB11Q9Y547 144 aa6.38□□□□□ -1.39
PDLIM5-209ENST00000506632 DNAH2Q9P225 4427 aa6.37□□□□□ -1.39
PDLIM5-209ENST00000506632 FAT2Q9NYQ8 4349 aa6.37□□□□□ -1.39
PDLIM5-209ENST00000506632 KLLNB2CW77 178 aa6.37□□□□□ -1.39
PDLIM5-209ENST00000506632 ATP5G1P05496 136 aa6.37□□□□□ -1.39
PDLIM5-209ENST00000506632 PET100P0DJ07 73 aa6.37□□□□□ -1.39
PDLIM5-209ENST00000506632 HTN1P15515 57 aa6.37□□□□□ -1.39
PDLIM5-209ENST00000506632 ATP5G3P48201 142 aa6.37□□□□□ -1.39
PDLIM5-209ENST00000506632 LINC00336Q6ZUF6 198 aa6.37□□□□□ -1.39
PDLIM5-209ENST00000506632 MIR17HGQ75NE6 70 aa6.37□□□□□ -1.39
PDLIM5-209ENST00000506632 EXOC3-AS1Q8N2X6 119 aa6.37□□□□□ -1.39
PDLIM5-209ENST00000506632 LINC00477Q96M19 166 aa6.37□□□□□ -1.39
PDLIM5-209ENST00000506632 MRPL32Q9BYC8 188 aaKnown RBP6.37□□□□□ -1.39
PDLIM5-209ENST00000506632 AGPAT4-IT1Q9H0P7 198 aa6.37□□□□□ -1.39
PDLIM5-209ENST00000506632 NOP10Q9NPE3 64 aaKnown RBP6.37□□□□□ -1.39
PDLIM5-209ENST00000506632 F5H768 121 aa6.36□□□□□ -1.39
PDLIM5-209ENST00000506632 RTL8CO15255 209 aa6.36□□□□□ -1.39
PDLIM5-209ENST00000506632 SSNA1O43805 119 aa6.36□□□□□ -1.39
PDLIM5-209ENST00000506632 SLC25A5P05141 298 aaKnown RBP6.36□□□□□ -1.39
PDLIM5-209ENST00000506632 NBEAP1P0C6P0 100 aa6.36□□□□□ -1.39
PDLIM5-209ENST00000506632 CRISP2P16562 243 aa6.36□□□□□ -1.39
PDLIM5-209ENST00000506632 ERCC8Q13216 396 aa6.36□□□□□ -1.39
PDLIM5-209ENST00000506632 C9orf47Q6ZRZ4 202 aa6.36□□□□□ -1.39
PDLIM5-209ENST00000506632 BLNKQ8WV28 456 aa6.36□□□□□ -1.39
PDLIM5-209ENST00000506632 FXYD5Q96DB9 178 aa6.36□□□□□ -1.39
PDLIM5-209ENST00000506632 ZNF503Q96F45 646 aa6.36□□□□□ -1.39
PDLIM5-209ENST00000506632 PYGO2Q9BRQ0 406 aa6.36□□□□□ -1.39
PDLIM5-209ENST00000506632 LINC00467Q9BRT7 94 aa6.36□□□□□ -1.39
PDLIM5-209ENST00000506632 OR51M1Q9H341 326 aa6.36□□□□□ -1.39
PDLIM5-209ENST00000506632 MBD2Q9UBB5 411 aa6.36□□□□□ -1.39
PDLIM5-209ENST00000506632 FUT9Q9Y231 359 aa6.36□□□□□ -1.39
PDLIM5-209ENST00000506632 TIMM9Q9Y5J7 89 aa6.36□□□□□ -1.39
PDLIM5-209ENST00000506632 IGKV2-40A0A087WW87 121 aaPredicted RBP6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 TRAV12-3A0A0B4J271 114 aa6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 A0A1B0GVY2 172 aa6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 C7orf71A4D174 169 aa6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 C17orf112F2Z3M2 114 aa6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 J3KRW8 73 aa6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 ZNF324O75467 553 aaPredicted RBP6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 IGKV2D-40P01614 121 aaPredicted RBP6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 NMBP08949 121 aa6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 RPL12P30050 165 aaKnown RBP6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 FAM3BP58499 235 aaPredicted RBP6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 DAZ2Q13117 558 aaKnown RBP6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 ICAM4Q14773 271 aa6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 UBE2DNLQ8IWF7 75 aa6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 ZFAND2AQ8N6M9 145 aa6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 C11orf72Q8NBR9 251 aa6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 PHYHIPLQ96FC7 376 aa6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 PAXXQ9BUH6 204 aa6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 AAMDCQ9H7C9 122 aa6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 WFDC1Q9HC57 220 aa6.35□□□□□ -1.39
PDLIM5-209ENST00000506632 M0R2N4 97 aa6.34□□□□□ -1.39
PDLIM5-209ENST00000506632 OR10J4P0C629 311 aa6.34□□□□□ -1.39
PDLIM5-209ENST00000506632 CD300CQ08708 224 aa6.34□□□□□ -1.39
PDLIM5-209ENST00000506632 ANXA2RQ3ZCQ2 193 aa6.34□□□□□ -1.39
PDLIM5-209ENST00000506632 FFAR4Q5NUL3 377 aa6.34□□□□□ -1.39
PDLIM5-209ENST00000506632 PRR9Q5T870 116 aa6.34□□□□□ -1.39
PDLIM5-209ENST00000506632 FAM122CQ6P4D5 195 aa6.34□□□□□ -1.39
PDLIM5-209ENST00000506632 CCDC28AQ8IWP9 274 aa6.34□□□□□ -1.39
PDLIM5-209ENST00000506632 LYPD1Q8N2G4 141 aa6.34□□□□□ -1.39
PDLIM5-209ENST00000506632 VGLL1Q99990 258 aa6.34□□□□□ -1.39
PDLIM5-209ENST00000506632 ZNF492Q9P255 531 aa6.34□□□□□ -1.39
PDLIM5-209ENST00000506632 ALG5Q9Y673 324 aa6.34□□□□□ -1.39
PDLIM5-209ENST00000506632 IGLV2-18A0A075B6J9 118 aa6.33□□□□□ -1.4
PDLIM5-209ENST00000506632 TRBV7-9A0A0J9YWB2 115 aa6.33□□□□□ -1.4
PDLIM5-209ENST00000506632 RBAKDNA6NC62 111 aa6.33□□□□□ -1.4
PDLIM5-209ENST00000506632 SNURFLB1AK76 121 aa6.33□□□□□ -1.4
PDLIM5-209ENST00000506632 LCE2BO14633 110 aa6.33□□□□□ -1.4
PDLIM5-209ENST00000506632 OR7C2O60412 319 aa6.33□□□□□ -1.4
PDLIM5-209ENST00000506632 PTTG1O95997 202 aa6.33□□□□□ -1.4
PDLIM5-209ENST00000506632 IFNA5P01569 189 aa6.33□□□□□ -1.4
PDLIM5-209ENST00000506632 BTN1A1Q13410 526 aa6.33□□□□□ -1.4
PDLIM5-209ENST00000506632 EIF4E3Q8N5X7 224 aaKnown RBP6.33□□□□□ -1.4
PDLIM5-209ENST00000506632 ZNF680Q8NEM1 530 aa6.33□□□□□ -1.4
PDLIM5-209ENST00000506632 ZNRF2Q8NHG8 242 aa6.33□□□□□ -1.4
PDLIM5-209ENST00000506632 C18orf15Q96N68 181 aa6.33□□□□□ -1.4
PDLIM5-209ENST00000506632 SMIM3Q9BZL3 60 aa6.33□□□□□ -1.4
PDLIM5-209ENST00000506632 GAGE12BA1L429 117 aa6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 H3BNG1 76 aa6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 GAGE7O76087 117 aa6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 NUDT3O95989 172 aa6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 GPX1P07203 203 aa6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 GAGE12FP0CL80 117 aa6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 GAGE12GP0CL81 117 aa6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 GAGE12IP0CL82 117 aa6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 HOXA5P20719 270 aa6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 RNASE4P34096 147 aaKnown RBP6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 ZNF138P52744 262 aa6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 TAS2R45P59539 299 aa6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 UBE2L3P68036 154 aaKnown RBP6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 KHDC3LQ587J8 217 aa6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 TMEM78Q5T7P6 136 aa6.32□□□□□ -1.4
PDLIM5-209ENST00000506632 Q6ZQT7 251 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms