RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 ZFAND2AQ8N6M9 145 aa11.69□□□□□ -0.54
PDLIM7-215ENST00000506161 RNF141Q8WVD5 230 aa11.69□□□□□ -0.54
PDLIM7-215ENST00000506161 ATP5SQ99766 215 aa11.69□□□□□ -0.54
PDLIM7-215ENST00000506161 C20orf144Q9BQM9 153 aa11.69□□□□□ -0.54
PDLIM7-215ENST00000506161 ZNF324O75467 553 aaPredicted RBP11.68□□□□□ -0.54
PDLIM7-215ENST00000506161 NBEAP1P0C6P0 100 aa11.68□□□□□ -0.54
PDLIM7-215ENST00000506161 CYCSP99999 105 aaKnown RBP11.68□□□□□ -0.54
PDLIM7-215ENST00000506161 LGALS9BQ3B8N2 356 aa11.68□□□□□ -0.54
PDLIM7-215ENST00000506161 C11orf72Q8NBR9 251 aa11.68□□□□□ -0.54
PDLIM7-215ENST00000506161 OR51M1Q9H341 326 aa11.68□□□□□ -0.54
PDLIM7-215ENST00000506161 TIMM9Q9Y5J7 89 aa11.68□□□□□ -0.54
PDLIM7-215ENST00000506161 ALG5Q9Y673 324 aa11.68□□□□□ -0.54
PDLIM7-215ENST00000506161 PKD1P98161 4303 aa11.67□□□□□ -0.54
PDLIM7-215ENST00000506161 GAGE12BA1L429 117 aa11.67□□□□□ -0.54
PDLIM7-215ENST00000506161 GAGE7O76087 117 aa11.67□□□□□ -0.54
PDLIM7-215ENST00000506161 ATP5G1P05496 136 aa11.67□□□□□ -0.54
PDLIM7-215ENST00000506161 GAGE12FP0CL80 117 aa11.67□□□□□ -0.54
PDLIM7-215ENST00000506161 GAGE12GP0CL81 117 aa11.67□□□□□ -0.54
PDLIM7-215ENST00000506161 GAGE12IP0CL82 117 aa11.67□□□□□ -0.54
PDLIM7-215ENST00000506161 RPL12P30050 165 aaKnown RBP11.67□□□□□ -0.54
PDLIM7-215ENST00000506161 LEPP41159 167 aa11.67□□□□□ -0.54
PDLIM7-215ENST00000506161 ATP5G3P48201 142 aa11.67□□□□□ -0.54
PDLIM7-215ENST00000506161 PDE6HQ13956 83 aa11.67□□□□□ -0.54
PDLIM7-215ENST00000506161 ZNF493Q6ZR52 646 aa11.67□□□□□ -0.54
PDLIM7-215ENST00000506161 Q6ZTI0 123 aa11.67□□□□□ -0.54
PDLIM7-215ENST00000506161 Q8TAT8 98 aa11.67□□□□□ -0.54
PDLIM7-215ENST00000506161 PAXXQ9BUH6 204 aa11.67□□□□□ -0.54
PDLIM7-215ENST00000506161 KRTAP4-5Q9BYR2 181 aa11.67□□□□□ -0.54
PDLIM7-215ENST00000506161 TP53TG3Q9ULZ0 132 aa11.67□□□□□ -0.54
PDLIM7-215ENST00000506161 FUT9Q9Y231 359 aa11.67□□□□□ -0.54
PDLIM7-215ENST00000506161 C7orf71A4D174 169 aa11.66□□□□□ -0.54
PDLIM7-215ENST00000506161 NUDT3O95989 172 aa11.66□□□□□ -0.54
PDLIM7-215ENST00000506161 RNF212Q495C1 297 aa11.66□□□□□ -0.54
PDLIM7-215ENST00000506161 FFAR4Q5NUL3 377 aa11.66□□□□□ -0.54
PDLIM7-215ENST00000506161 C9orf47Q6ZRZ4 202 aa11.66□□□□□ -0.54
PDLIM7-215ENST00000506161 C15orf53Q8NAA6 179 aa11.66□□□□□ -0.54
PDLIM7-215ENST00000506161 MRPL32Q9BYC8 188 aaKnown RBP11.66□□□□□ -0.54
PDLIM7-215ENST00000506161 PRELID1Q9Y255 219 aa11.66□□□□□ -0.54
PDLIM7-215ENST00000506161 MUC4Q99102 2169 aa11.66□□□□□ -0.54
PDLIM7-215ENST00000506161 PRSS29PA6NIE9 313 aa11.65□□□□□ -0.54
PDLIM7-215ENST00000506161 SLC25A5P05141 298 aaKnown RBP11.65□□□□□ -0.54
PDLIM7-215ENST00000506161 CRISP2P16562 243 aa11.65□□□□□ -0.54
PDLIM7-215ENST00000506161 RNASE4P34096 147 aaKnown RBP11.65□□□□□ -0.54
PDLIM7-215ENST00000506161 DEFA1P59665 94 aa11.65□□□□□ -0.54
PDLIM7-215ENST00000506161 DEFA3P59666 94 aa11.65□□□□□ -0.54
PDLIM7-215ENST00000506161 ZNRF2Q8NHG8 242 aa11.65□□□□□ -0.54
PDLIM7-215ENST00000506161 GSN-AS1Q9NRJ2 163 aa11.65□□□□□ -0.54
PDLIM7-215ENST00000506161 LINC00588Q9Y4M8 146 aa11.65□□□□□ -0.54
PDLIM7-215ENST00000506161 KLF12Q9Y4X4 402 aa11.65□□□□□ -0.54
PDLIM7-215ENST00000506161 PKHD1P08F94 4074 aa11.65□□□□□ -0.55
PDLIM7-215ENST00000506161 DYNC1H1Q14204 4646 aaKnown RBP11.64□□□□□ -0.55
PDLIM7-215ENST00000506161 Q5BKY6 102 aa11.64□□□□□ -0.55
PDLIM7-215ENST00000506161 LINC00477Q96M19 166 aa11.64□□□□□ -0.55
PDLIM7-215ENST00000506161 PYGO2Q9BRQ0 406 aa11.64□□□□□ -0.55
PDLIM7-215ENST00000506161 TMPRSS5Q9H3S3 457 aa11.64□□□□□ -0.55
PDLIM7-215ENST00000506161 ZNF492Q9P255 531 aa11.64□□□□□ -0.55
PDLIM7-215ENST00000506161 A0A0J9YY99 117 aa11.63□□□□□ -0.55
PDLIM7-215ENST00000506161 OR7C2O60412 319 aa11.63□□□□□ -0.55
PDLIM7-215ENST00000506161 Q9H3A6 140 aa11.63□□□□□ -0.55
PDLIM7-215ENST00000506161 AAMDCQ9H7C9 122 aa11.63□□□□□ -0.55
PDLIM7-215ENST00000506161 BATF3Q9NR55 127 aa11.63□□□□□ -0.55
PDLIM7-215ENST00000506161 TRAV26-1A0A087WT03 109 aa11.62□□□□□ -0.55
PDLIM7-215ENST00000506161 C17orf112F2Z3M2 114 aa11.62□□□□□ -0.55
PDLIM7-215ENST00000506161 RAB2AP61019 212 aa11.62□□□□□ -0.55
PDLIM7-215ENST00000506161 RANP62826 216 aaKnown RBP11.62□□□□□ -0.55
PDLIM7-215ENST00000506161 OR5I1Q13606 314 aa11.62□□□□□ -0.55
PDLIM7-215ENST00000506161 CCDC28AQ8IWP9 274 aa11.62□□□□□ -0.55
PDLIM7-215ENST00000506161 SNURFLB1AK76 121 aa11.61□□□□□ -0.55
PDLIM7-215ENST00000506161 HMGB3O15347 200 aaKnown RBP11.61□□□□□ -0.55
PDLIM7-215ENST00000506161 UBE2L3P68036 154 aaKnown RBP11.61□□□□□ -0.55
PDLIM7-215ENST00000506161 DAZ2Q13117 558 aaKnown RBP11.61□□□□□ -0.55
PDLIM7-215ENST00000506161 VSIG2Q96IQ7 327 aa11.61□□□□□ -0.55
PDLIM7-215ENST00000506161 LINC00467Q9BRT7 94 aa11.61□□□□□ -0.55
PDLIM7-215ENST00000506161 KRTAP1-5Q9BYS1 174 aa11.61□□□□□ -0.55
PDLIM7-215ENST00000506161 GPX1P07203 203 aa11.6□□□□□ -0.55
PDLIM7-215ENST00000506161 EIF4E3Q8N5X7 224 aaKnown RBP11.6□□□□□ -0.55
PDLIM7-215ENST00000506161 KCNIP2Q9NS61 270 aa11.6□□□□□ -0.55
PDLIM7-215ENST00000506161 DNAH11Q96DT5 4516 aa11.59□□□□□ -0.55
PDLIM7-215ENST00000506161 PET100P0DJ07 73 aa11.59□□□□□ -0.55
PDLIM7-215ENST00000506161 ZNF138P52744 262 aa11.59□□□□□ -0.55
PDLIM7-215ENST00000506161 ANXA2RQ3ZCQ2 193 aa11.59□□□□□ -0.55
PDLIM7-215ENST00000506161 TMEM78Q5T7P6 136 aa11.59□□□□□ -0.55
PDLIM7-215ENST00000506161 ATG101Q9BSB4 218 aa11.59□□□□□ -0.55
PDLIM7-215ENST00000506161 MRPL16Q9NX20 251 aaKnown RBP11.59□□□□□ -0.55
PDLIM7-215ENST00000506161 DIRC3C9JPN6 131 aa11.58□□□□□ -0.56
PDLIM7-215ENST00000506161 SPINK4O60575 86 aa11.58□□□□□ -0.56
PDLIM7-215ENST00000506161 IFNA5P01569 189 aa11.58□□□□□ -0.56
PDLIM7-215ENST00000506161 M6PRP20645 277 aa11.58□□□□□ -0.56
PDLIM7-215ENST00000506161 TCL1AP56279 114 aa11.58□□□□□ -0.56
PDLIM7-215ENST00000506161 ESRGQ1W209 222 aa11.58□□□□□ -0.56
PDLIM7-215ENST00000506161 MUC21Q5SSG8 566 aa11.58□□□□□ -0.56
PDLIM7-215ENST00000506161 SSX7Q7RTT5 188 aa11.58□□□□□ -0.56
PDLIM7-215ENST00000506161 SCGB1C1Q8TD33 95 aa11.58□□□□□ -0.56
PDLIM7-215ENST00000506161 RXFP4Q8TDU9 374 aa11.58□□□□□ -0.56
PDLIM7-215ENST00000506161 GNPNAT1Q96EK6 184 aaPredicted RBP11.58□□□□□ -0.56
PDLIM7-215ENST00000506161 TVP23CQ96ET8 276 aa11.58□□□□□ -0.56
PDLIM7-215ENST00000506161 IGHV1OR15-1A0A075B7D0 117 aa11.57□□□□□ -0.56
PDLIM7-215ENST00000506161 TRGV1A0A0A0MS02 117 aa11.57□□□□□ -0.56
PDLIM7-215ENST00000506161 NBDYA0A0U1RRE5 68 aa11.57□□□□□ -0.56
PDLIM7-215ENST00000506161 GNG5P63218 68 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms