RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 PPP1R14DQ9NXH3 145 aa6.13□□□□□ -1.43
COL4A5-208ENST00000505728 NAT8BQ9UHF3 227 aa6.13□□□□□ -1.43
COL4A5-208ENST00000505728 TRAPPC1Q9Y5R8 145 aa6.13□□□□□ -1.43
COL4A5-208ENST00000505728 IGHV4OR15-8A0A075B7B6 117 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 A0A087WW49 117 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 IGKV2-40A0A087WW87 121 aaPredicted RBP6.12□□□□□ -1.43
COL4A5-208ENST00000505728 C5orf52A6NGY3 159 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 ZNF705FA8MVS1 300 aaPredicted RBP6.12□□□□□ -1.43
COL4A5-208ENST00000505728 A8MWP6 167 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 OVOL1O14753 267 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 IGKV2D-40P01614 121 aaPredicted RBP6.12□□□□□ -1.43
COL4A5-208ENST00000505728 CT45A10P0DMU9 189 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 SRD5A1P18405 259 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 ACTL10Q5JWF8 245 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 IGFL4Q6B9Z1 124 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 WDR73Q6P4I2 378 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 LINC00322Q6ZN03 302 aaPredicted RBP6.12□□□□□ -1.43
COL4A5-208ENST00000505728 PKD1L1Q8TDX9 2849 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 SORL1Q92673 2214 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 FRZBQ92765 325 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 ZC2HC1AQ96GY0 325 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 PRR25Q96S07 402 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 NDFIP1Q9BT67 221 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 GNB1LQ9BYB4 327 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 SAV1Q9H4B6 383 aaPredicted RBP6.12□□□□□ -1.43
COL4A5-208ENST00000505728 NRN1Q9NPD7 142 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 ESM1Q9NQ30 184 aa6.12□□□□□ -1.43
COL4A5-208ENST00000505728 LINC01619G3V211 115 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 SOCS3O14543 225 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 HIST1H2BKO60814 126 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 MT-ND6P03923 174 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 HIST1H2BJP06899 126 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 HOXA5P20719 270 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 HIST1H2BOP23527 126 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 HIST1H2BBP33778 126 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 ID1P41134 155 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 FOXA3P55318 350 aaPredicted RBP6.11□□□□□ -1.43
COL4A5-208ENST00000505728 NDUFA6P56556 154 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 HIST1H2BDP58876 126 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 HILS1P60008 231 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 RPS20P60866 119 aaKnown RBP6.11□□□□□ -1.43
COL4A5-208ENST00000505728 SNRPEP62304 92 aaKnown RBP6.11□□□□□ -1.43
COL4A5-208ENST00000505728 HIST1H2BCP62807 126 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 KLF5Q13887 457 aaPredicted RBP6.11□□□□□ -1.43
COL4A5-208ENST00000505728 HIST2H2BEQ16778 126 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 SMUG1Q53HV7 270 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.11□□□□□ -1.43
COL4A5-208ENST00000505728 C9orf47Q6ZRZ4 202 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 TCF24Q7RTU0 167 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 NUP35Q8NFH5 326 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 WIPF2Q8TF74 440 aaPredicted RBP6.11□□□□□ -1.43
COL4A5-208ENST00000505728 C4orf3Q8WVX3 66 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 DPF1Q92782 380 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 HIST1H2BHQ93079 126 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 LINC00477Q96M19 166 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 C8orf49Q96NF6 230 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 HIST1H2BNQ99877 126 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 HIST1H2BMQ99879 126 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 VGLL1Q99990 258 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 LENEPQ9Y5L5 61 aa6.11□□□□□ -1.43
COL4A5-208ENST00000505728 MEGF8Q7Z7M0 2845 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 TMEM213A2RRL7 107 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 XKRY2A2RUG3 117 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 PRAC2D3DTV9 90 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 M0QZ24 198 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 UBE2CO00762 179 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 NDUFA7O95182 113 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 HOXD3P31249 432 aaPredicted RBP6.1□□□□□ -1.43
COL4A5-208ENST00000505728 CRIP1P50238 77 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 ZNF138P52744 262 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 TCL1AP56279 114 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 FABP9Q0Z7S8 132 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 FAM162BQ5T6X4 162 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 TMEM78Q5T7P6 136 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 DMRTA1Q5VZB9 504 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 ATP5L2Q7Z4Y8 100 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 RNF182Q8N6D2 247 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 OR2D3Q8NGH3 330 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 OR1N2Q8NGR9 330 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 NEU1Q99519 415 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 AGPAT4-IT1Q9H0P7 198 aa6.1□□□□□ -1.43
COL4A5-208ENST00000505728 WNK1Q9H4A3 2382 aa6.09□□□□□ -1.43
COL4A5-208ENST00000505728 TRBV7-9A0A0J9YWB2 115 aa6.09□□□□□ -1.43
COL4A5-208ENST00000505728 TMEM189A5PLL7 270 aa6.09□□□□□ -1.43
COL4A5-208ENST00000505728 C2orf70A6NJV1 201 aa6.09□□□□□ -1.43
COL4A5-208ENST00000505728 FABP5P3A8MUU1 101 aa6.09□□□□□ -1.43
COL4A5-208ENST00000505728 HIGD1CA8MV81 97 aa6.09□□□□□ -1.43
COL4A5-208ENST00000505728 SNURFLB1AK76 121 aa6.09□□□□□ -1.43
COL4A5-208ENST00000505728 CA1P00915 261 aaPredicted RBP6.09□□□□□ -1.43
COL4A5-208ENST00000505728 HLA-DQA1P01909 254 aa6.09□□□□□ -1.43
COL4A5-208ENST00000505728 SYNJ2BPP57105 145 aa6.09□□□□□ -1.43
COL4A5-208ENST00000505728 RPL11P62913 178 aaKnown RBP6.09□□□□□ -1.43
COL4A5-208ENST00000505728 ERCC8Q13216 396 aa6.09□□□□□ -1.43
COL4A5-208ENST00000505728 TCTEX1D4Q5JR98 221 aa6.09□□□□□ -1.43
COL4A5-208ENST00000505728 Q6AWC8 147 aa6.09□□□□□ -1.43
COL4A5-208ENST00000505728 TMEM136Q6ZRR5 245 aa6.09□□□□□ -1.43
COL4A5-208ENST00000505728 RBPMS2Q6ZRY4 209 aaKnown RBP6.09□□□□□ -1.43
COL4A5-208ENST00000505728 ZNF738Q8NE65 137 aa6.09□□□□□ -1.43
COL4A5-208ENST00000505728 OR10J6PQ8NGY7 276 aa6.09□□□□□ -1.43
COL4A5-208ENST00000505728 C20orf173Q96LM9 149 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms