RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 FAM74A7A6NL05 159 aa9.08□□□□□ -0.96
SNCA-208ENST00000505199 KLLNB2CW77 178 aa9.08□□□□□ -0.96
SNCA-208ENST00000505199 PRAC2D3DTV9 90 aa9.08□□□□□ -0.96
SNCA-208ENST00000505199 F6UZH7 168 aa9.08□□□□□ -0.96
SNCA-208ENST00000505199 TCRAP04437 139 aa9.08□□□□□ -0.96
SNCA-208ENST00000505199 ZNF138P52744 262 aa9.08□□□□□ -0.96
SNCA-208ENST00000505199 BLOC1S1P78537 153 aa9.08□□□□□ -0.96
SNCA-208ENST00000505199 RARRES2Q99969 163 aa9.08□□□□□ -0.96
SNCA-208ENST00000505199 ATG101Q9BSB4 218 aa9.08□□□□□ -0.96
SNCA-208ENST00000505199 SLC35B3Q9H1N7 401 aa9.08□□□□□ -0.96
SNCA-208ENST00000505199 ZNF492Q9P255 531 aa9.08□□□□□ -0.96
SNCA-208ENST00000505199 GOLT1BQ9Y3E0 138 aa9.08□□□□□ -0.96
SNCA-208ENST00000505199 TMEM189A5PLL7 270 aa9.07□□□□□ -0.96
SNCA-208ENST00000505199 GGTLC3B5MD39 225 aa9.07□□□□□ -0.96
SNCA-208ENST00000505199 DEFB1P60022 68 aa9.07□□□□□ -0.96
SNCA-208ENST00000505199 SUMO1P63165 101 aaKnown RBP9.07□□□□□ -0.96
SNCA-208ENST00000505199 CCDC28AQ8IWP9 274 aa9.07□□□□□ -0.96
SNCA-208ENST00000505199 IQCF2Q8IXL9 164 aa9.07□□□□□ -0.96
SNCA-208ENST00000505199 CYB561D1Q8N8Q1 229 aa9.07□□□□□ -0.96
SNCA-208ENST00000505199 LYPD6BQ8NI32 183 aa9.07□□□□□ -0.96
SNCA-208ENST00000505199 AGPAT4-IT1Q9H0P7 198 aa9.07□□□□□ -0.96
SNCA-208ENST00000505199 XCL2Q9UBD3 114 aa9.07□□□□□ -0.96
SNCA-208ENST00000505199 EPDR1Q9UM22 224 aa9.07□□□□□ -0.96
SNCA-208ENST00000505199 NBEAL2Q6ZNJ1 2754 aa9.07□□□□□ -0.96
SNCA-208ENST00000505199 H7BYZ3 331 aa9.06□□□□□ -0.96
SNCA-208ENST00000505199 CRXO43186 299 aaPredicted RBP9.06□□□□□ -0.96
SNCA-208ENST00000505199 IGKV3-20P01619 116 aa9.06□□□□□ -0.96
SNCA-208ENST00000505199 CT45A10P0DMU9 189 aa9.06□□□□□ -0.96
SNCA-208ENST00000505199 NKX2-5P52952 324 aaPredicted RBP9.06□□□□□ -0.96
SNCA-208ENST00000505199 FGF8P55075 233 aaPredicted RBP9.06□□□□□ -0.96
SNCA-208ENST00000505199 SPINK13Q1W4C9 94 aa9.06□□□□□ -0.96
SNCA-208ENST00000505199 TMEM75Q8N9X5 138 aa9.06□□□□□ -0.96
SNCA-208ENST00000505199 OR11H2Q8NH07 326 aa9.06□□□□□ -0.96
SNCA-208ENST00000505199 IL17DQ8TAD2 202 aa9.06□□□□□ -0.96
SNCA-208ENST00000505199 NDUFS6O75380 124 aaKnown RBP9.05□□□□□ -0.96
SNCA-208ENST00000505199 EIF3GO75821 320 aaKnown RBP eCLIP9.05□□□□□ -0.96
SNCA-208ENST00000505199 IFNA1P01562 189 aa9.05□□□□□ -0.96
SNCA-208ENST00000505199 S100A9P06702 114 aaKnown RBP9.05□□□□□ -0.96
SNCA-208ENST00000505199 SAPCD1Q5SSQ6 148 aa9.05□□□□□ -0.96
SNCA-208ENST00000505199 ALKAL2Q6UX46 152 aa9.05□□□□□ -0.96
SNCA-208ENST00000505199 WWC2-AS2Q96NR7 200 aa9.05□□□□□ -0.96
SNCA-208ENST00000505199 LINC00467Q9BRT7 94 aa9.05□□□□□ -0.96
SNCA-208ENST00000505199 NDFIP1Q9BT67 221 aa9.05□□□□□ -0.96
SNCA-208ENST00000505199 TMPRSS5Q9H3S3 457 aa9.05□□□□□ -0.96
SNCA-208ENST00000505199 EDA2RQ9HAV5 297 aa9.05□□□□□ -0.96
SNCA-208ENST00000505199 YTHDF2Q9Y5A9 579 aaKnown RBP9.05□□□□□ -0.96
SNCA-208ENST00000505199 X6R8D5 127 aa9.05□□□□□ -0.96
SNCA-208ENST00000505199 TENM3Q9P273 2699 aa9.04□□□□□ -0.96
SNCA-208ENST00000505199 IGKV2-40A0A087WW87 121 aaPredicted RBP9.04□□□□□ -0.96
SNCA-208ENST00000505199 TRBV6-1A0A0K0K1D8 114 aa9.04□□□□□ -0.96
SNCA-208ENST00000505199 TEX48A0A1B0GUV7 120 aa9.04□□□□□ -0.96
SNCA-208ENST00000505199 M0R2Z0 102 aa9.04□□□□□ -0.96
SNCA-208ENST00000505199 IFNA7P01567 189 aa9.04□□□□□ -0.96
SNCA-208ENST00000505199 IGKV2D-40P01614 121 aaPredicted RBP9.04□□□□□ -0.96
SNCA-208ENST00000505199 TAS2R60P59551 318 aa9.04□□□□□ -0.96
SNCA-208ENST00000505199 TEX261Q6UWH6 196 aa9.04□□□□□ -0.96
SNCA-208ENST00000505199 ZNF493Q6ZR52 646 aa9.04□□□□□ -0.96
SNCA-208ENST00000505199 GOLT1AQ6ZVE7 132 aa9.04□□□□□ -0.96
SNCA-208ENST00000505199 VGLL1Q99990 258 aa9.04□□□□□ -0.96
SNCA-208ENST00000505199 PYGO2Q9BRQ0 406 aa9.04□□□□□ -0.96
SNCA-208ENST00000505199 NIPSNAP3BQ9BS92 247 aa9.04□□□□□ -0.96
SNCA-208ENST00000505199 KLF12Q9Y4X4 402 aa9.04□□□□□ -0.96
SNCA-208ENST00000505199 GPX1P07203 203 aa9.03□□□□□ -0.96
SNCA-208ENST00000505199 FLI1Q01543 452 aaPredicted RBP9.03□□□□□ -0.96
SNCA-208ENST00000505199 COX8CQ7Z4L0 72 aa9.03□□□□□ -0.96
SNCA-208ENST00000505199 C1orf158Q8N1D5 194 aa9.03□□□□□ -0.96
SNCA-208ENST00000505199 ZFAND2AQ8N6M9 145 aa9.03□□□□□ -0.96
SNCA-208ENST00000505199 Q8NAQ8 132 aa9.03□□□□□ -0.96
SNCA-208ENST00000505199 FMC1Q96HJ9 113 aa9.03□□□□□ -0.96
SNCA-208ENST00000505199 TMEM208Q9BTX3 173 aa9.03□□□□□ -0.96
SNCA-208ENST00000505199 C7orf71A4D174 169 aa9.02□□□□□ -0.97
SNCA-208ENST00000505199 PEX7O00628 323 aa9.02□□□□□ -0.97
SNCA-208ENST00000505199 PDE6DO43924 150 aa9.02□□□□□ -0.97
SNCA-208ENST00000505199 PAGE4O60829 102 aa9.02□□□□□ -0.97
SNCA-208ENST00000505199 IGLV2-11P01706 119 aa9.02□□□□□ -0.97
SNCA-208ENST00000505199 UBE2G2P60604 165 aa9.02□□□□□ -0.97
SNCA-208ENST00000505199 RRN3P1Q2M238 152 aa9.02□□□□□ -0.97
SNCA-208ENST00000505199 GFI1BQ5VTD9 330 aa9.02□□□□□ -0.97
SNCA-208ENST00000505199 CST9LP1Q5W188 147 aa9.02□□□□□ -0.97
SNCA-208ENST00000505199 Q6AWC8 147 aa9.02□□□□□ -0.97
SNCA-208ENST00000505199 RETNQ9HD89 108 aa9.02□□□□□ -0.97
SNCA-208ENST00000505199 ZFP30Q9Y2G7 519 aa9.02□□□□□ -0.97
SNCA-208ENST00000505199 BOLA1Q9Y3E2 137 aa9.02□□□□□ -0.97
SNCA-208ENST00000505199 C11orf94C9JXX5 98 aa9.01□□□□□ -0.97
SNCA-208ENST00000505199 ZNF324O75467 553 aaPredicted RBP9.01□□□□□ -0.97
SNCA-208ENST00000505199 BCL2P10415 239 aa9.01□□□□□ -0.97
SNCA-208ENST00000505199 MEF2BQ02080 365 aaPredicted RBP9.01□□□□□ -0.97
SNCA-208ENST00000505199 ERCC8Q13216 396 aa9.01□□□□□ -0.97
SNCA-208ENST00000505199 TMEM183BQ1AE95 376 aa9.01□□□□□ -0.97
SNCA-208ENST00000505199 ZNF680Q8NEM1 530 aa9.01□□□□□ -0.97
SNCA-208ENST00000505199 TMEM263Q8WUH6 116 aaKnown RBP9.01□□□□□ -0.97
SNCA-208ENST00000505199 C11orf52Q96A22 123 aa9.01□□□□□ -0.97
SNCA-208ENST00000505199 TRAV12-2A0A075B6T6 113 aa9□□□□□ -0.97
SNCA-208ENST00000505199 FXYD7P58549 80 aa9□□□□□ -0.97
SNCA-208ENST00000505199 GNG5P63218 68 aa9□□□□□ -0.97
SNCA-208ENST00000505199 TDRG1Q3Y452 100 aa9□□□□□ -0.97
SNCA-208ENST00000505199 ANXA2RQ3ZCQ2 193 aa9□□□□□ -0.97
SNCA-208ENST00000505199 C2CD4CQ8TF44 421 aa9□□□□□ -0.97
SNCA-208ENST00000505199 SMIM12Q96EX1 92 aa9□□□□□ -0.97
SNCA-208ENST00000505199 C16orf74Q96GX8 76 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms