RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 FAM167A-AS1Q96KT0 104 aa7.17□□□□□ -1.26
NR1I3-220ENST00000505005 C20orf173Q96LM9 149 aa7.17□□□□□ -1.26
NR1I3-220ENST00000505005 TCEAL7Q9BRU2 100 aa7.17□□□□□ -1.26
NR1I3-220ENST00000505005 NIPSNAP3BQ9BS92 247 aa7.17□□□□□ -1.26
NR1I3-220ENST00000505005 SH3BGRL3Q9H299 93 aa7.17□□□□□ -1.26
NR1I3-220ENST00000505005 RETNQ9HD89 108 aa7.17□□□□□ -1.26
NR1I3-220ENST00000505005 OTORQ9NRC9 128 aa7.17□□□□□ -1.26
NR1I3-220ENST00000505005 CTXND1A0A1B0GTU2 59 aa7.16□□□□□ -1.26
NR1I3-220ENST00000505005 NPIPB6E9PJ23 425 aa7.16□□□□□ -1.26
NR1I3-220ENST00000505005 F6UZH7 168 aa7.16□□□□□ -1.26
NR1I3-220ENST00000505005 NDUFS6O75380 124 aaKnown RBP7.16□□□□□ -1.26
NR1I3-220ENST00000505005 TAGLN2P37802 199 aaKnown RBP7.16□□□□□ -1.26
NR1I3-220ENST00000505005 ICAM4Q14773 271 aa7.16□□□□□ -1.26
NR1I3-220ENST00000505005 GDF5OSQ5U4N7 250 aa7.16□□□□□ -1.26
NR1I3-220ENST00000505005 FAM122CQ6P4D5 195 aa7.16□□□□□ -1.26
NR1I3-220ENST00000505005 RNF182Q8N6D2 247 aa7.16□□□□□ -1.26
NR1I3-220ENST00000505005 MBD3L1Q8WWY6 194 aa7.16□□□□□ -1.26
NR1I3-220ENST00000505005 FXYD5Q96DB9 178 aa7.16□□□□□ -1.26
NR1I3-220ENST00000505005 FAM210BQ96KR6 192 aa7.16□□□□□ -1.26
NR1I3-220ENST00000505005 C17orf77Q96MU5 243 aa7.16□□□□□ -1.26
NR1I3-220ENST00000505005 PYGO2Q9BRQ0 406 aa7.16□□□□□ -1.26
NR1I3-220ENST00000505005 NDFIP1Q9BT67 221 aa7.16□□□□□ -1.26
NR1I3-220ENST00000505005 LYRM9A8MSI8 78 aa7.15□□□□□ -1.26
NR1I3-220ENST00000505005 F6UB75 175 aa7.15□□□□□ -1.26
NR1I3-220ENST00000505005 GIG44P09565 113 aaPredicted RBP7.15□□□□□ -1.26
NR1I3-220ENST00000505005 PYYP10082 97 aa7.15□□□□□ -1.26
NR1I3-220ENST00000505005 S100A1P23297 94 aa7.15□□□□□ -1.26
NR1I3-220ENST00000505005 RANP62826 216 aaKnown RBP7.15□□□□□ -1.26
NR1I3-220ENST00000505005 GCSAMLQ5JQS6 135 aa7.15□□□□□ -1.26
NR1I3-220ENST00000505005 MORN5Q5VZ52 161 aa7.15□□□□□ -1.26
NR1I3-220ENST00000505005 AMTNQ6UX39 209 aa7.15□□□□□ -1.26
NR1I3-220ENST00000505005 Q8NAQ8 132 aa7.15□□□□□ -1.26
NR1I3-220ENST00000505005 RAB24Q969Q5 203 aa7.15□□□□□ -1.26
NR1I3-220ENST00000505005 C16orf74Q96GX8 76 aa7.15□□□□□ -1.26
NR1I3-220ENST00000505005 LINC01587Q99440 93 aa7.15□□□□□ -1.26
NR1I3-220ENST00000505005 SLC35B3Q9H1N7 401 aa7.15□□□□□ -1.26
NR1I3-220ENST00000505005 Q9H3A6 140 aa7.15□□□□□ -1.26
NR1I3-220ENST00000505005 SMDT1Q9H4I9 107 aa7.15□□□□□ -1.26
NR1I3-220ENST00000505005 ARL2-SNX15V9GYD0 113 aa7.15□□□□□ -1.26
NR1I3-220ENST00000505005 NBEAL2Q6ZNJ1 2754 aa7.15□□□□□ -1.26
NR1I3-220ENST00000505005 TRAV10A0A0B4J240 114 aa7.14□□□□□ -1.27
NR1I3-220ENST00000505005 IGHV4-28A0A0C4DH34 117 aa7.14□□□□□ -1.27
NR1I3-220ENST00000505005 A0A1W2PRE2 83 aa7.14□□□□□ -1.27
NR1I3-220ENST00000505005 PGPA6NDG6 321 aa7.14□□□□□ -1.27
NR1I3-220ENST00000505005 HMGB3O15347 200 aaKnown RBP7.14□□□□□ -1.27
NR1I3-220ENST00000505005 NDUFB4O95168 129 aa7.14□□□□□ -1.27
NR1I3-220ENST00000505005 GPX1P07203 203 aa7.14□□□□□ -1.27
NR1I3-220ENST00000505005 H2AFB1P0C5Y9 115 aa7.14□□□□□ -1.27
NR1I3-220ENST00000505005 OR10J4P0C629 311 aa7.14□□□□□ -1.27
NR1I3-220ENST00000505005 ZNF138P52744 262 aa7.14□□□□□ -1.27
NR1I3-220ENST00000505005 SPINK13Q1W4C9 94 aa7.14□□□□□ -1.27
NR1I3-220ENST00000505005 CEMP1Q6PRD7 247 aaPredicted RBP7.14□□□□□ -1.27
NR1I3-220ENST00000505005 RPP25LQ8N5L8 163 aaKnown RBP7.14□□□□□ -1.27
NR1I3-220ENST00000505005 C5orf17Q8NAS9 161 aa7.14□□□□□ -1.27
NR1I3-220ENST00000505005 FAM213BQ8TBF2 198 aa7.14□□□□□ -1.27
NR1I3-220ENST00000505005 SUN5Q8TC36 379 aa7.14□□□□□ -1.27
NR1I3-220ENST00000505005 C2CD4CQ8TF44 421 aa7.14□□□□□ -1.27
NR1I3-220ENST00000505005 STAB2Q8WWQ8 2551 aa7.14□□□□□ -1.27
NR1I3-220ENST00000505005 X6R8D5 127 aa7.14□□□□□ -1.27
NR1I3-220ENST00000505005 IGHV3OR16-12A0A075B7B8 117 aa7.13□□□□□ -1.27
NR1I3-220ENST00000505005 LOC102723971A0A1B0GUV8 181 aa7.13□□□□□ -1.27
NR1I3-220ENST00000505005 SLC17A3O00476 420 aa7.13□□□□□ -1.27
NR1I3-220ENST00000505005 EREGO14944 169 aa7.13□□□□□ -1.27
NR1I3-220ENST00000505005 ATP6V1G1O75348 118 aa7.13□□□□□ -1.27
NR1I3-220ENST00000505005 CRISP2P16562 243 aa7.13□□□□□ -1.27
NR1I3-220ENST00000505005 SAPCD1Q5SSQ6 148 aa7.13□□□□□ -1.27
NR1I3-220ENST00000505005 IGFL4Q6B9Z1 124 aa7.13□□□□□ -1.27
NR1I3-220ENST00000505005 COMMD7Q86VX2 200 aa7.13□□□□□ -1.27
NR1I3-220ENST00000505005 TMEM263Q8WUH6 116 aaKnown RBP7.13□□□□□ -1.27
NR1I3-220ENST00000505005 PHLDA1Q8WV24 401 aaPredicted RBP7.13□□□□□ -1.27
NR1I3-220ENST00000505005 LINC00467Q9BRT7 94 aa7.13□□□□□ -1.27
NR1I3-220ENST00000505005 ZNF492Q9P255 531 aa7.13□□□□□ -1.27
NR1I3-220ENST00000505005 TIMM8BQ9Y5J9 83 aaPredicted RBP7.13□□□□□ -1.27
NR1I3-220ENST00000505005 DNAH9Q9NYC9 4486 aa7.13□□□□□ -1.27
NR1I3-220ENST00000505005 TENM3Q9P273 2699 aa7.12□□□□□ -1.27
NR1I3-220ENST00000505005 SNURFLB1AK76 121 aa7.12□□□□□ -1.27
NR1I3-220ENST00000505005 DIRC3C9JPN6 131 aa7.12□□□□□ -1.27
NR1I3-220ENST00000505005 ARL14EPLP0DKL9 152 aa7.12□□□□□ -1.27
NR1I3-220ENST00000505005 GCHFRP30047 84 aa7.12□□□□□ -1.27
NR1I3-220ENST00000505005 FHITP49789 147 aa7.12□□□□□ -1.27
NR1I3-220ENST00000505005 EXOC3-AS1Q8N2X6 119 aa7.12□□□□□ -1.27
NR1I3-220ENST00000505005 HIST1H2BAQ96A08 127 aa7.12□□□□□ -1.27
NR1I3-220ENST00000505005 FAM210AQ96ND0 272 aa7.12□□□□□ -1.27
NR1I3-220ENST00000505005 TXNDC17Q9BRA2 123 aa7.12□□□□□ -1.27
NR1I3-220ENST00000505005 C7orf71A4D174 169 aa7.11□□□□□ -1.27
NR1I3-220ENST00000505005 MAP1LC3B2A6NCE7 125 aa7.11□□□□□ -1.27
NR1I3-220ENST00000505005 KLLNB2CW77 178 aa7.11□□□□□ -1.27
NR1I3-220ENST00000505005 KRBOX1C9JBD0 128 aa7.11□□□□□ -1.27
NR1I3-220ENST00000505005 H3BTX0 84 aa7.11□□□□□ -1.27
NR1I3-220ENST00000505005 M0R2Z0 102 aa7.11□□□□□ -1.27
NR1I3-220ENST00000505005 LCE2BO14633 110 aa7.11□□□□□ -1.27
NR1I3-220ENST00000505005 CRXO43186 299 aaPredicted RBP7.11□□□□□ -1.27
NR1I3-220ENST00000505005 IFNA1P01562 189 aa7.11□□□□□ -1.27
NR1I3-220ENST00000505005 S100A9P06702 114 aaKnown RBP7.11□□□□□ -1.27
NR1I3-220ENST00000505005 HLA-DMBP28068 263 aa7.11□□□□□ -1.27
NR1I3-220ENST00000505005 FXYD7P58549 80 aa7.11□□□□□ -1.27
NR1I3-220ENST00000505005 C1orf158Q8N1D5 194 aa7.11□□□□□ -1.27
NR1I3-220ENST00000505005 KCNS1Q96KK3 526 aa7.11□□□□□ -1.27
NR1I3-220ENST00000505005 MAP1LC3BQ9GZQ8 125 aa7.11□□□□□ -1.27
NR1I3-220ENST00000505005 AGPAT4-IT1Q9H0P7 198 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms