RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 NDFIP1Q9BT67 221 aa10.05□□□□□ -0.8
LMNA-220ENST00000504687 NAT8BQ9UHF3 227 aa10.05□□□□□ -0.8
LMNA-220ENST00000504687 TSSC4Q9Y5U2 329 aaPredicted RBP10.05□□□□□ -0.8
LMNA-220ENST00000504687 IZUMO1RA6ND01 250 aa10.04□□□□□ -0.8
LMNA-220ENST00000504687 ZNF705FA8MVS1 300 aaPredicted RBP10.04□□□□□ -0.8
LMNA-220ENST00000504687 M0QZ24 198 aa10.04□□□□□ -0.8
LMNA-220ENST00000504687 TCF21O43680 179 aa10.04□□□□□ -0.8
LMNA-220ENST00000504687 CT45A10P0DMU9 189 aa10.04□□□□□ -0.8
LMNA-220ENST00000504687 ID1P41134 155 aa10.04□□□□□ -0.8
LMNA-220ENST00000504687 ZNF138P52744 262 aa10.04□□□□□ -0.8
LMNA-220ENST00000504687 PROK1P58294 105 aa10.04□□□□□ -0.8
LMNA-220ENST00000504687 ACTL10Q5JWF8 245 aa10.04□□□□□ -0.8
LMNA-220ENST00000504687 ATP5L2Q7Z4Y8 100 aa10.04□□□□□ -0.8
LMNA-220ENST00000504687 RNF182Q8N6D2 247 aa10.04□□□□□ -0.8
LMNA-220ENST00000504687 OR11H1Q8NG94 326 aa10.04□□□□□ -0.8
LMNA-220ENST00000504687 VGLL1Q99990 258 aa10.04□□□□□ -0.8
LMNA-220ENST00000504687 SIGLEC8Q9NYZ4 499 aa10.04□□□□□ -0.8
LMNA-220ENST00000504687 TEP1Q99973 2627 aaKnown RBP10.03□□□□□ -0.8
LMNA-220ENST00000504687 A0A1B0GUS0 222 aa10.03□□□□□ -0.8
LMNA-220ENST00000504687 PRAC2D3DTV9 90 aa10.03□□□□□ -0.8
LMNA-220ENST00000504687 CRLF1O75462 422 aa10.03□□□□□ -0.8
LMNA-220ENST00000504687 MT-ND6P03923 174 aa10.03□□□□□ -0.8
LMNA-220ENST00000504687 CRIP1P50238 77 aa10.03□□□□□ -0.8
LMNA-220ENST00000504687 SMUG1Q53HV7 270 aa10.03□□□□□ -0.8
LMNA-220ENST00000504687 FAM162BQ5T6X4 162 aa10.03□□□□□ -0.8
LMNA-220ENST00000504687 Q6AWC8 147 aa10.03□□□□□ -0.8
LMNA-220ENST00000504687 IGFL4Q6B9Z1 124 aa10.03□□□□□ -0.8
LMNA-220ENST00000504687 PRR27Q6MZM9 219 aa10.03□□□□□ -0.8
LMNA-220ENST00000504687 KLHL30-AS1Q8NEE0 82 aa10.03□□□□□ -0.8
LMNA-220ENST00000504687 OR9G4Q8NGQ1 327 aa10.03□□□□□ -0.8
LMNA-220ENST00000504687 GNB1LQ9BYB4 327 aa10.03□□□□□ -0.8
LMNA-220ENST00000504687 AGPAT4-IT1Q9H0P7 198 aa10.03□□□□□ -0.8
LMNA-220ENST00000504687 SONP18583 2426 aaKnown RBP10.03□□□□□ -0.8
LMNA-220ENST00000504687 HIVEP2P31629 2446 aa10.02□□□□□ -0.81
LMNA-220ENST00000504687 INAFM1C9JVW0 142 aa10.02□□□□□ -0.81
LMNA-220ENST00000504687 K7EQG2 157 aa10.02□□□□□ -0.81
LMNA-220ENST00000504687 TRGC2P03986 189 aa10.02□□□□□ -0.81
LMNA-220ENST00000504687 TMEM78Q5T7P6 136 aa10.02□□□□□ -0.81
LMNA-220ENST00000504687 WDR73Q6P4I2 378 aa10.02□□□□□ -0.81
LMNA-220ENST00000504687 C18orf65Q6ZTR6 163 aa10.02□□□□□ -0.81
LMNA-220ENST00000504687 APRG1Q8IVJ8 170 aa10.02□□□□□ -0.81
LMNA-220ENST00000504687 C20orf173Q96LM9 149 aa10.02□□□□□ -0.81
LMNA-220ENST00000504687 FAM19A4Q96LR4 140 aa10.02□□□□□ -0.81
LMNA-220ENST00000504687 ASCL2Q99929 193 aa10.02□□□□□ -0.81
LMNA-220ENST00000504687 CD28P10747 220 aa10.01□□□□□ -0.81
LMNA-220ENST00000504687 SLURP1P55000 103 aa10.01□□□□□ -0.81
LMNA-220ENST00000504687 RPS20P60866 119 aaKnown RBP10.01□□□□□ -0.81
LMNA-220ENST00000504687 ADAMTSL5Q6ZMM2 481 aa10.01□□□□□ -0.81
LMNA-220ENST00000504687 ZNF738Q8NE65 137 aa10.01□□□□□ -0.81
LMNA-220ENST00000504687 NUP35Q8NFH5 326 aa10.01□□□□□ -0.81
LMNA-220ENST00000504687 C8orf49Q96NF6 230 aa10.01□□□□□ -0.81
LMNA-220ENST00000504687 NEU1Q99519 415 aa10.01□□□□□ -0.81
LMNA-220ENST00000504687 MS4A6AQ9H2W1 248 aa10.01□□□□□ -0.81
LMNA-220ENST00000504687 RNF114Q9Y508 228 aa10.01□□□□□ -0.81
LMNA-220ENST00000504687 FN1P02751 2386 aaKnown RBP10□□□□□ -0.81
LMNA-220ENST00000504687 XKRY2A2RUG3 117 aa10□□□□□ -0.81
LMNA-220ENST00000504687 C5orf52A6NGY3 159 aa10□□□□□ -0.81
LMNA-220ENST00000504687 FABP5P3A8MUU1 101 aa10□□□□□ -0.81
LMNA-220ENST00000504687 HIST1H2BKO60814 126 aa10□□□□□ -0.81
LMNA-220ENST00000504687 SH2D1AO60880 128 aa10□□□□□ -0.81
LMNA-220ENST00000504687 HIST1H2BJP06899 126 aa10□□□□□ -0.81
LMNA-220ENST00000504687 CSN3P07498 182 aa10□□□□□ -0.81
LMNA-220ENST00000504687 EDN2P20800 178 aa10□□□□□ -0.81
LMNA-220ENST00000504687 HIST1H2BOP23527 126 aa10□□□□□ -0.81
LMNA-220ENST00000504687 HIST1H2BBP33778 126 aa10□□□□□ -0.81
LMNA-220ENST00000504687 HIST1H2BDP58876 126 aa10□□□□□ -0.81
LMNA-220ENST00000504687 HIST1H2BCP62807 126 aa10□□□□□ -0.81
LMNA-220ENST00000504687 PAFAH1B2P68402 229 aa10□□□□□ -0.81
LMNA-220ENST00000504687 HIST1H1AQ02539 215 aaPredicted RBP10□□□□□ -0.81
LMNA-220ENST00000504687 HIST2H2BEQ16778 126 aa10□□□□□ -0.81
LMNA-220ENST00000504687 HIST2H2BFQ5QNW6 126 aaPredicted RBP10□□□□□ -0.81
LMNA-220ENST00000504687 RBPMS2Q6ZRY4 209 aaKnown RBP10□□□□□ -0.81
LMNA-220ENST00000504687 OR8A1Q8NGG7 326 aa10□□□□□ -0.81
LMNA-220ENST00000504687 OR10J6PQ8NGY7 276 aa10□□□□□ -0.81
LMNA-220ENST00000504687 FRZBQ92765 325 aa10□□□□□ -0.81
LMNA-220ENST00000504687 HIST1H2BHQ93079 126 aa10□□□□□ -0.81
LMNA-220ENST00000504687 RAX2Q96IS3 184 aa10□□□□□ -0.81
LMNA-220ENST00000504687 ODF3Q96PU9 254 aa10□□□□□ -0.81
LMNA-220ENST00000504687 HIST1H2BNQ99877 126 aa10□□□□□ -0.81
LMNA-220ENST00000504687 HIST1H2BMQ99879 126 aa10□□□□□ -0.81
LMNA-220ENST00000504687 TRAV25A0A0B4J276 109 aa9.99□□□□□ -0.81
LMNA-220ENST00000504687 A0A1B0GXF2 115 aa9.99□□□□□ -0.81
LMNA-220ENST00000504687 HIGD1CA8MV81 97 aa9.99□□□□□ -0.81
LMNA-220ENST00000504687 CCL24O00175 119 aa9.99□□□□□ -0.81
LMNA-220ENST00000504687 HLA-DQA1P01909 254 aa9.99□□□□□ -0.81
LMNA-220ENST00000504687 CRISP2P16562 243 aa9.99□□□□□ -0.81
LMNA-220ENST00000504687 SNRPD3P62318 126 aaKnown RBP9.99□□□□□ -0.81
LMNA-220ENST00000504687 RPL11P62913 178 aaKnown RBP9.99□□□□□ -0.81
LMNA-220ENST00000504687 ERCC8Q13216 396 aa9.99□□□□□ -0.81
LMNA-220ENST00000504687 DEFB136Q30KP8 78 aa9.99□□□□□ -0.81
LMNA-220ENST00000504687 COA6Q5JTJ3 125 aaKnown RBP9.99□□□□□ -0.81
LMNA-220ENST00000504687 GATD1Q8NB37 220 aa9.99□□□□□ -0.81
LMNA-220ENST00000504687 OR2D3Q8NGH3 330 aa9.99□□□□□ -0.81
LMNA-220ENST00000504687 GTSF1Q8WW33 167 aa9.99□□□□□ -0.81
LMNA-220ENST00000504687 DLX4Q92988 240 aaPredicted RBP9.99□□□□□ -0.81
LMNA-220ENST00000504687 CITED2Q99967 270 aaPredicted RBP9.99□□□□□ -0.81
LMNA-220ENST00000504687 GPR61Q9BZJ8 451 aa9.99□□□□□ -0.81
LMNA-220ENST00000504687 A0A1B0GW15 77 aa9.98□□□□□ -0.81
LMNA-220ENST00000504687 CA1P00915 261 aaPredicted RBP9.98□□□□□ -0.81
LMNA-220ENST00000504687 TRGC1P0CF51 173 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms