RNA–Protein interactions for RNA: ENST00000503979.1

APBB3-208, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 2

Gene APBB3, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-208	ENST00000503979	CXorf1	O96002	111 aa		13.62	□□□□□ -0.23
APBB3-208	ENST00000503979	SPART-AS1	P0CW21	52 aa		13.62	□□□□□ -0.23
APBB3-208	ENST00000503979	TMEM78	Q5T7P6	136 aa		13.62	□□□□□ -0.23
APBB3-208	ENST00000503979	GFI1B	Q5VTD9	330 aa		13.62	□□□□□ -0.23
APBB3-208	ENST00000503979	ZNF492	Q9P255	531 aa		13.62	□□□□□ -0.23
APBB3-208	ENST00000503979	PLEC	Q15149	4684 aa	Known RBP	13.61	□□□□□ -0.23
APBB3-208	ENST00000503979	CTXND1	A0A1B0GTU2	59 aa		13.61	□□□□□ -0.23
APBB3-208	ENST00000503979	DIRC3	C9JPN6	131 aa		13.61	□□□□□ -0.23
APBB3-208	ENST00000503979	HMGB3	O15347	200 aa	Known RBP	13.61	□□□□□ -0.23
APBB3-208	ENST00000503979	BCL2L11	O43521	198 aa		13.61	□□□□□ -0.23
APBB3-208	ENST00000503979	EIF3G	O75821	320 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
APBB3-208	ENST00000503979	ERCC8	Q13216	396 aa		13.61	□□□□□ -0.23
APBB3-208	ENST00000503979	TMED6	Q8WW62	240 aa		13.61	□□□□□ -0.23
APBB3-208	ENST00000503979	LINC01587	Q99440	93 aa		13.61	□□□□□ -0.23
APBB3-208	ENST00000503979	TMEM167B	Q9NRX6	74 aa		13.61	□□□□□ -0.23
APBB3-208	ENST00000503979	DKK2	Q9UBU2	259 aa		13.61	□□□□□ -0.23
APBB3-208	ENST00000503979	CELA1	Q9UNI1	258 aa		13.61	□□□□□ -0.23
APBB3-208	ENST00000503979	LENEP	Q9Y5L5	61 aa		13.61	□□□□□ -0.23
APBB3-208	ENST00000503979	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.6	□□□□□ -0.23
APBB3-208	ENST00000503979	KANTR	A0A1W2PQU2	76 aa		13.6	□□□□□ -0.23
APBB3-208	ENST00000503979	IGKV2D-40	P01614	121 aa	Predicted RBP	13.6	□□□□□ -0.23
APBB3-208	ENST00000503979	SEC11B	P0C7V7	166 aa		13.6	□□□□□ -0.23
APBB3-208	ENST00000503979	GCHFR	P30047	84 aa		13.6	□□□□□ -0.23
APBB3-208	ENST00000503979	KIR3DS1	Q14943	382 aa		13.6	□□□□□ -0.23
APBB3-208	ENST00000503979	C12orf74	Q32Q52	190 aa		13.6	□□□□□ -0.23
APBB3-208	ENST00000503979	AKR1C8P	Q5T2L2	129 aa		13.6	□□□□□ -0.23
APBB3-208	ENST00000503979	ZNF493	Q6ZR52	646 aa		13.6	□□□□□ -0.23
APBB3-208	ENST00000503979	LYST	Q99698	3801 aa		13.6	□□□□□ -0.23
APBB3-208	ENST00000503979	VGLL1	Q99990	258 aa		13.6	□□□□□ -0.23
APBB3-208	ENST00000503979	LCE6A	A0A183	80 aa		13.59	□□□□□ -0.23
APBB3-208	ENST00000503979	PGP	A6NDG6	321 aa		13.59	□□□□□ -0.23
APBB3-208	ENST00000503979	ZNF138	P52744	262 aa		13.59	□□□□□ -0.23
APBB3-208	ENST00000503979	TCTA	P57738	103 aa		13.59	□□□□□ -0.23
APBB3-208	ENST00000503979	EIF5A	P63241	154 aa	Known RBP	13.59	□□□□□ -0.23
APBB3-208	ENST00000503979	ZNF726P1	Q15940	193 aa		13.59	□□□□□ -0.23
APBB3-208	ENST00000503979	CMTM2	Q8TAZ6	248 aa		13.59	□□□□□ -0.23
APBB3-208	ENST00000503979	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.59	□□□□□ -0.23
APBB3-208	ENST00000503979	TRAV10	A0A0B4J240	114 aa		13.58	□□□□□ -0.24
APBB3-208	ENST00000503979	SERTM2	A0A1B0GWG4	89 aa		13.58	□□□□□ -0.24
APBB3-208	ENST00000503979	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.58	□□□□□ -0.24
APBB3-208	ENST00000503979		Q6ZTC4	211 aa		13.58	□□□□□ -0.24
APBB3-208	ENST00000503979	SSX7	Q7RTT5	188 aa		13.58	□□□□□ -0.24
APBB3-208	ENST00000503979	ZFAND2A	Q8N6M9	145 aa		13.58	□□□□□ -0.24
APBB3-208	ENST00000503979	C16orf74	Q96GX8	76 aa		13.58	□□□□□ -0.24
APBB3-208	ENST00000503979	PYGO2	Q9BRQ0	406 aa		13.58	□□□□□ -0.24
APBB3-208	ENST00000503979	LINC00467	Q9BRT7	94 aa		13.58	□□□□□ -0.24
APBB3-208	ENST00000503979	PLAC8L1	A1L4L8	177 aa		13.57	□□□□□ -0.24
APBB3-208	ENST00000503979	C7orf71	A4D174	169 aa		13.57	□□□□□ -0.24
APBB3-208	ENST00000503979	LYRM9	A8MSI8	78 aa		13.57	□□□□□ -0.24
APBB3-208	ENST00000503979	ZNF324	O75467	553 aa	Predicted RBP	13.57	□□□□□ -0.24
APBB3-208	ENST00000503979	FAM222A	Q5U5X8	452 aa		13.57	□□□□□ -0.24
APBB3-208	ENST00000503979	TMUB2	Q71RG4	321 aa		13.57	□□□□□ -0.24
APBB3-208	ENST00000503979	RNASE8	Q8TDE3	154 aa	Known RBP	13.57	□□□□□ -0.24
APBB3-208	ENST00000503979	C2CD4C	Q8TF44	421 aa		13.57	□□□□□ -0.24
APBB3-208	ENST00000503979	TMEM263	Q8WUH6	116 aa	Known RBP	13.57	□□□□□ -0.24
APBB3-208	ENST00000503979	NIPSNAP3B	Q9BS92	247 aa		13.57	□□□□□ -0.24
APBB3-208	ENST00000503979	SACS	Q9NZJ4	4579 aa		13.57	□□□□□ -0.24
APBB3-208	ENST00000503979	RYR3	Q15413	4870 aa		13.57	□□□□□ -0.24
APBB3-208	ENST00000503979		A0A1W2PRE2	83 aa		13.56	□□□□□ -0.24
APBB3-208	ENST00000503979	UMAD1	C9J7I0	102 aa		13.56	□□□□□ -0.24
APBB3-208	ENST00000503979	C1QB	P02746	253 aa		13.56	□□□□□ -0.24
APBB3-208	ENST00000503979	AZU1	P20160	251 aa		13.56	□□□□□ -0.24
APBB3-208	ENST00000503979	EMP1	P54849	157 aa		13.56	□□□□□ -0.24
APBB3-208	ENST00000503979	C5orf17	Q8NAS9	161 aa		13.56	□□□□□ -0.24
APBB3-208	ENST00000503979	STOML3	Q8TAV4	291 aa		13.56	□□□□□ -0.24
APBB3-208	ENST00000503979	ZNF471	Q9BX82	626 aa	Predicted RBP	13.56	□□□□□ -0.24
APBB3-208	ENST00000503979	TRAV12-3	A0A0B4J271	114 aa		13.55	□□□□□ -0.24
APBB3-208	ENST00000503979	GPX1	P07203	203 aa		13.55	□□□□□ -0.24
APBB3-208	ENST00000503979	HYLS1	Q96M11	299 aa		13.55	□□□□□ -0.24
APBB3-208	ENST00000503979	PFDN1	O60925	122 aa		13.54	□□□□□ -0.24
APBB3-208	ENST00000503979	PRM2	P04554	102 aa		13.54	□□□□□ -0.24
APBB3-208	ENST00000503979	CD300C	Q08708	224 aa		13.54	□□□□□ -0.24
APBB3-208	ENST00000503979	DPPA3	Q6W0C5	159 aa		13.54	□□□□□ -0.24
APBB3-208	ENST00000503979	CCDC28A	Q8IWP9	274 aa		13.54	□□□□□ -0.24
APBB3-208	ENST00000503979	NKX6-2	Q9C056	277 aa	Predicted RBP	13.54	□□□□□ -0.24
APBB3-208	ENST00000503979	TPT1	P13693	172 aa	Known RBP	13.53	□□□□□ -0.24
APBB3-208	ENST00000503979	BTN1A1	Q13410	526 aa		13.53	□□□□□ -0.24
APBB3-208	ENST00000503979	ANXA2R	Q3ZCQ2	193 aa		13.53	□□□□□ -0.24
APBB3-208	ENST00000503979	LGALSL	Q3ZCW2	172 aa	Predicted RBP	13.53	□□□□□ -0.24
APBB3-208	ENST00000503979	AKAP14	Q86UN6	197 aa		13.53	□□□□□ -0.24
APBB3-208	ENST00000503979	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.53	□□□□□ -0.24
APBB3-208	ENST00000503979	DEFB131B	A0A096LNP1	70 aa		13.52	□□□□□ -0.25
APBB3-208	ENST00000503979	MAP1LC3B2	A6NCE7	125 aa		13.52	□□□□□ -0.25
APBB3-208	ENST00000503979	FBLL1	A6NHQ2	334 aa	Known RBP	13.52	□□□□□ -0.25
APBB3-208	ENST00000503979	GGTLC3	B5MD39	225 aa		13.52	□□□□□ -0.25
APBB3-208	ENST00000503979		J3KRW8	73 aa		13.52	□□□□□ -0.25
APBB3-208	ENST00000503979	TCRA	P04437	139 aa		13.52	□□□□□ -0.25
APBB3-208	ENST00000503979	RNASE4	P34096	147 aa	Known RBP	13.52	□□□□□ -0.25
APBB3-208	ENST00000503979	GOLT1A	Q6ZVE7	132 aa		13.52	□□□□□ -0.25
APBB3-208	ENST00000503979		Q8TAT8	98 aa		13.52	□□□□□ -0.25
APBB3-208	ENST00000503979	MAP1LC3B	Q9GZQ8	125 aa		13.52	□□□□□ -0.25
APBB3-208	ENST00000503979	PLA2G2E	Q9NZK7	142 aa		13.52	□□□□□ -0.25
APBB3-208	ENST00000503979		K7EQM0	130 aa		13.51	□□□□□ -0.25
APBB3-208	ENST00000503979	HTN1	P15515	57 aa		13.51	□□□□□ -0.25
APBB3-208	ENST00000503979	SUMO1	P63165	101 aa	Known RBP	13.51	□□□□□ -0.25
APBB3-208	ENST00000503979	PRR9	Q5T870	116 aa		13.51	□□□□□ -0.25
APBB3-208	ENST00000503979		Q6AWC8	147 aa		13.51	□□□□□ -0.25
APBB3-208	ENST00000503979	MBD3L1	Q8WWY6	194 aa		13.51	□□□□□ -0.25
APBB3-208	ENST00000503979	FAM210B	Q96KR6	192 aa		13.51	□□□□□ -0.25
APBB3-208	ENST00000503979	EPDR1	Q9UM22	224 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms