RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 C1QTNF4Q9BXJ3 329 aa11.2□□□□□ -0.62
DDR1-250ENST00000503628 APOBP04114 4563 aaKnown RBP11.2□□□□□ -0.62
DDR1-250ENST00000503628 NDUFB4O95168 129 aa11.19□□□□□ -0.62
DDR1-250ENST00000503628 IGKV3-20P01619 116 aa11.19□□□□□ -0.62
DDR1-250ENST00000503628 CDC34P49427 236 aaPredicted RBP11.19□□□□□ -0.62
DDR1-250ENST00000503628 NUTF2P61970 127 aaKnown RBP11.19□□□□□ -0.62
DDR1-250ENST00000503628 PSG9Q00887 426 aa11.19□□□□□ -0.62
DDR1-250ENST00000503628 OR4B1Q8NGF8 309 aa11.19□□□□□ -0.62
DDR1-250ENST00000503628 RPUSD4Q96CM3 377 aaKnown RBP11.19□□□□□ -0.62
DDR1-250ENST00000503628 A8MTW9 85 aa11.18□□□□□ -0.62
DDR1-250ENST00000503628 ZNF705FA8MVS1 300 aaPredicted RBP11.18□□□□□ -0.62
DDR1-250ENST00000503628 PFDN1O60925 122 aa11.18□□□□□ -0.62
DDR1-250ENST00000503628 EIF3GO75821 320 aaKnown RBP eCLIP11.18□□□□□ -0.62
DDR1-250ENST00000503628 DUSP14O95147 198 aaKnown RBP11.18□□□□□ -0.62
DDR1-250ENST00000503628 HTN3P15516 51 aa11.18□□□□□ -0.62
DDR1-250ENST00000503628 UBE2L3P68036 154 aaKnown RBP11.18□□□□□ -0.62
DDR1-250ENST00000503628 PQLC2Q6ZP29 291 aa11.18□□□□□ -0.62
DDR1-250ENST00000503628 OR8A1Q8NGG7 326 aa11.18□□□□□ -0.62
DDR1-250ENST00000503628 HYLS1Q96M11 299 aa11.18□□□□□ -0.62
DDR1-250ENST00000503628 ZNF471Q9BX82 626 aaPredicted RBP11.18□□□□□ -0.62
DDR1-250ENST00000503628 HMGB3O15347 200 aaKnown RBP11.17□□□□□ -0.62
DDR1-250ENST00000503628 ZNF705DP0CH99 300 aaPredicted RBP11.17□□□□□ -0.62
DDR1-250ENST00000503628 ZNF705BP0CI00 300 aaPredicted RBP11.17□□□□□ -0.62
DDR1-250ENST00000503628 CNN1P51911 297 aaKnown RBP11.17□□□□□ -0.62
DDR1-250ENST00000503628 CD300CQ08708 224 aa11.17□□□□□ -0.62
DDR1-250ENST00000503628 LGALSLQ3ZCW2 172 aaPredicted RBP11.17□□□□□ -0.62
DDR1-250ENST00000503628 AKR1C8PQ5T2L2 129 aa11.17□□□□□ -0.62
DDR1-250ENST00000503628 ZNF705AQ6ZN79 300 aaPredicted RBP11.17□□□□□ -0.62
DDR1-250ENST00000503628 RAB24Q969Q5 203 aa11.17□□□□□ -0.62
DDR1-250ENST00000503628 MRPL53Q96EL3 112 aaKnown RBP11.17□□□□□ -0.62
DDR1-250ENST00000503628 NEU1Q99519 415 aa11.17□□□□□ -0.62
DDR1-250ENST00000503628 ACTR3CQ9C0K3 210 aaPredicted RBP11.17□□□□□ -0.62
DDR1-250ENST00000503628 AAMDCQ9H7C9 122 aa11.17□□□□□ -0.62
DDR1-250ENST00000503628 PRELID1Q9Y255 219 aa11.17□□□□□ -0.62
DDR1-250ENST00000503628 TMEM189A5PLL7 270 aa11.16□□□□□ -0.62
DDR1-250ENST00000503628 STAG3L2P0CL84 134 aa11.16□□□□□ -0.62
DDR1-250ENST00000503628 STAG3L3P0CL85 134 aa11.16□□□□□ -0.62
DDR1-250ENST00000503628 PRB4P10163 310 aaPredicted RBP11.16□□□□□ -0.62
DDR1-250ENST00000503628 EIF5AP63241 154 aaKnown RBP11.16□□□□□ -0.62
DDR1-250ENST00000503628 HIST1H1AQ02539 215 aaPredicted RBP11.16□□□□□ -0.62
DDR1-250ENST00000503628 EXOC3-AS1Q8N2X6 119 aa11.16□□□□□ -0.62
DDR1-250ENST00000503628 PHYHIPLQ96FC7 376 aa11.16□□□□□ -0.62
DDR1-250ENST00000503628 NIPSNAP3BQ9BS92 247 aa11.16□□□□□ -0.62
DDR1-250ENST00000503628 DKK2Q9UBU2 259 aa11.16□□□□□ -0.62
DDR1-250ENST00000503628 PRAC2D3DTV9 90 aa11.15□□□□□ -0.62
DDR1-250ENST00000503628 ARL14EPLP0DKL9 152 aa11.15□□□□□ -0.62
DDR1-250ENST00000503628 FXYD7P58549 80 aa11.15□□□□□ -0.62
DDR1-250ENST00000503628 FAM222AQ5U5X8 452 aa11.15□□□□□ -0.62
DDR1-250ENST00000503628 AMTNQ6UX39 209 aa11.15□□□□□ -0.62
DDR1-250ENST00000503628 LYPD1Q8N2G4 141 aa11.15□□□□□ -0.62
DDR1-250ENST00000503628 OR10J6PQ8NGY7 276 aa11.15□□□□□ -0.62
DDR1-250ENST00000503628 SLC35B3Q9H1N7 401 aa11.15□□□□□ -0.62
DDR1-250ENST00000503628 IGHV3OR16-12A0A075B7B8 117 aa11.14□□□□□ -0.63
DDR1-250ENST00000503628 SMIM9A6NGZ8 99 aa11.14□□□□□ -0.63
DDR1-250ENST00000503628 M0R3E3 92 aa11.14□□□□□ -0.63
DDR1-250ENST00000503628 SEC11BP0C7V7 166 aa11.14□□□□□ -0.63
DDR1-250ENST00000503628 TPT1P13693 172 aaKnown RBP11.14□□□□□ -0.63
DDR1-250ENST00000503628 ICAM4Q14773 271 aa11.14□□□□□ -0.63
DDR1-250ENST00000503628 ZFP69Q49AA0 526 aa11.14□□□□□ -0.63
DDR1-250ENST00000503628 TMEM88Q6PEY1 159 aa11.14□□□□□ -0.63
DDR1-250ENST00000503628 SSX7Q7RTT5 188 aa11.14□□□□□ -0.63
DDR1-250ENST00000503628 C6orf223Q8N319 242 aa11.14□□□□□ -0.63
DDR1-250ENST00000503628 STOML3Q8TAV4 291 aa11.14□□□□□ -0.63
DDR1-250ENST00000503628 Q9H3A6 140 aa11.14□□□□□ -0.63
DDR1-250ENST00000503628 DNAH5Q8TE73 4624 aa11.13□□□□□ -0.63
DDR1-250ENST00000503628 CTXND1A0A1B0GTU2 59 aa11.13□□□□□ -0.63
DDR1-250ENST00000503628 CXorf1O96002 111 aa11.13□□□□□ -0.63
DDR1-250ENST00000503628 GCHFRP30047 84 aa11.13□□□□□ -0.63
DDR1-250ENST00000503628 FAM3BP58499 235 aaPredicted RBP11.13□□□□□ -0.63
DDR1-250ENST00000503628 RANP62826 216 aaKnown RBP11.13□□□□□ -0.63
DDR1-250ENST00000503628 ZNF726P1Q15940 193 aa11.13□□□□□ -0.63
DDR1-250ENST00000503628 BAP18Q8IXM2 172 aa11.13□□□□□ -0.63
DDR1-250ENST00000503628 DMBT1Q9UGM3 2413 aaPredicted RBP11.12□□□□□ -0.63
DDR1-250ENST00000503628 NBDYA0A0U1RRE5 68 aa11.12□□□□□ -0.63
DDR1-250ENST00000503628 SPATA12Q7Z6I5 190 aa11.12□□□□□ -0.63
DDR1-250ENST00000503628 SUN5Q8TC36 379 aa11.12□□□□□ -0.63
DDR1-250ENST00000503628 PPP1R14DQ9NXH3 145 aa11.12□□□□□ -0.63
DDR1-250ENST00000503628 TEX48A0A1B0GUV7 120 aa11.11□□□□□ -0.63
DDR1-250ENST00000503628 UMAD1C9J7I0 102 aa11.11□□□□□ -0.63
DDR1-250ENST00000503628 NPIPB6E9PJ23 425 aa11.11□□□□□ -0.63
DDR1-250ENST00000503628 BOLA2-SMG1P6H3BVE0 249 aa11.11□□□□□ -0.63
DDR1-250ENST00000503628 M0R2Z0 102 aa11.11□□□□□ -0.63
DDR1-250ENST00000503628 SPINK13Q1W4C9 94 aa11.11□□□□□ -0.63
DDR1-250ENST00000503628 C9orf62Q8N4C0 152 aa11.11□□□□□ -0.63
DDR1-250ENST00000503628 ATG101Q9BSB4 218 aa11.11□□□□□ -0.63
DDR1-250ENST00000503628 OTORQ9NRC9 128 aa11.11□□□□□ -0.63
DDR1-250ENST00000503628 TMEM167BQ9NRX6 74 aa11.11□□□□□ -0.63
DDR1-250ENST00000503628 CSN1S1P47710 185 aa11.1□□□□□ -0.63
DDR1-250ENST00000503628 FAM74A1Q5RGS3 127 aa11.1□□□□□ -0.63
DDR1-250ENST00000503628 SLC51BQ86UW2 128 aa11.1□□□□□ -0.63
DDR1-250ENST00000503628 TMED6Q8WW62 240 aa11.1□□□□□ -0.63
DDR1-250ENST00000503628 IGF2BP2-AS1Q96M15 143 aa11.1□□□□□ -0.63
DDR1-250ENST00000503628 IGKV2-40A0A087WW87 121 aaPredicted RBP11.09□□□□□ -0.63
DDR1-250ENST00000503628 MAP1LC3B2A6NCE7 125 aa11.09□□□□□ -0.63
DDR1-250ENST00000503628 PGPA6NDG6 321 aa11.09□□□□□ -0.63
DDR1-250ENST00000503628 IGKV2D-40P01614 121 aaPredicted RBP11.09□□□□□ -0.63
DDR1-250ENST00000503628 FHITP49789 147 aa11.09□□□□□ -0.63
DDR1-250ENST00000503628 ERCC8Q13216 396 aa11.09□□□□□ -0.63
DDR1-250ENST00000503628 IQCF2Q8IXL9 164 aa11.09□□□□□ -0.63
DDR1-250ENST00000503628 C15orf53Q8NAA6 179 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms