RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 C1orf158Q8N1D5 194 aa7.76□□□□□ -1.17
UBE2D3-212ENST00000502563 EXOC3-AS1Q8N2X6 119 aa7.76□□□□□ -1.17
UBE2D3-212ENST00000502563 TCEAL7Q9BRU2 100 aa7.76□□□□□ -1.17
UBE2D3-212ENST00000502563 ZNF471Q9BX82 626 aaPredicted RBP7.76□□□□□ -1.17
UBE2D3-212ENST00000502563 DNAH7Q8WXX0 4024 aa7.76□□□□□ -1.17
UBE2D3-212ENST00000502563 A0A0J9YWU9 116 aa7.75□□□□□ -1.17
UBE2D3-212ENST00000502563 PRAC2D3DTV9 90 aa7.75□□□□□ -1.17
UBE2D3-212ENST00000502563 H3BTX0 84 aa7.75□□□□□ -1.17
UBE2D3-212ENST00000502563 PFDN1O60925 122 aa7.75□□□□□ -1.17
UBE2D3-212ENST00000502563 LEPP41159 167 aa7.75□□□□□ -1.17
UBE2D3-212ENST00000502563 RANP62826 216 aaKnown RBP7.75□□□□□ -1.17
UBE2D3-212ENST00000502563 ZNF726P1Q15940 193 aa7.75□□□□□ -1.17
UBE2D3-212ENST00000502563 SLC51BQ86UW2 128 aa7.75□□□□□ -1.17
UBE2D3-212ENST00000502563 LINC00467Q9BRT7 94 aa7.75□□□□□ -1.17
UBE2D3-212ENST00000502563 ZNF492Q9P255 531 aa7.75□□□□□ -1.17
UBE2D3-212ENST00000502563 IGHV4-28A0A0C4DH34 117 aa7.74□□□□□ -1.17
UBE2D3-212ENST00000502563 DIRC3C9JPN6 131 aa7.74□□□□□ -1.17
UBE2D3-212ENST00000502563 H7BYZ3 331 aa7.74□□□□□ -1.17
UBE2D3-212ENST00000502563 IGKV3-20P01619 116 aa7.74□□□□□ -1.17
UBE2D3-212ENST00000502563 SNRPCP09234 159 aaKnown RBP7.74□□□□□ -1.17
UBE2D3-212ENST00000502563 CT45A10P0DMU9 189 aa7.74□□□□□ -1.17
UBE2D3-212ENST00000502563 TAS2R60P59551 318 aa7.74□□□□□ -1.17
UBE2D3-212ENST00000502563 SPINK13Q1W4C9 94 aa7.74□□□□□ -1.17
UBE2D3-212ENST00000502563 TMEM78Q5T7P6 136 aa7.74□□□□□ -1.17
UBE2D3-212ENST00000502563 C5orf17Q8NAS9 161 aa7.74□□□□□ -1.17
UBE2D3-212ENST00000502563 MBD3L1Q8WWY6 194 aa7.74□□□□□ -1.17
UBE2D3-212ENST00000502563 AGPAT4-IT1Q9H0P7 198 aa7.74□□□□□ -1.17
UBE2D3-212ENST00000502563 TRAV1-1A0A0B4J248 108 aa7.73□□□□□ -1.17
UBE2D3-212ENST00000502563 M0R2Z0 102 aa7.73□□□□□ -1.17
UBE2D3-212ENST00000502563 HBE1P02100 147 aa7.73□□□□□ -1.17
UBE2D3-212ENST00000502563 FHITP49789 147 aa7.73□□□□□ -1.17
UBE2D3-212ENST00000502563 CASC10Q5T4H9 136 aa7.73□□□□□ -1.17
UBE2D3-212ENST00000502563 ZNF493Q6ZR52 646 aa7.73□□□□□ -1.17
UBE2D3-212ENST00000502563 CMTM2Q8TAZ6 248 aa7.73□□□□□ -1.17
UBE2D3-212ENST00000502563 PYGO2Q9BRQ0 406 aa7.73□□□□□ -1.17
UBE2D3-212ENST00000502563 MAP1LC3B2A6NCE7 125 aa7.72□□□□□ -1.17
UBE2D3-212ENST00000502563 PGPA6NDG6 321 aa7.72□□□□□ -1.17
UBE2D3-212ENST00000502563 NUPR2A6NF83 97 aa7.72□□□□□ -1.17
UBE2D3-212ENST00000502563 C11orf94C9JXX5 98 aa7.72□□□□□ -1.17
UBE2D3-212ENST00000502563 RBMY1A1P0DJD3 496 aaKnown RBP7.72□□□□□ -1.17
UBE2D3-212ENST00000502563 RBMY1CP0DJD4 496 aa7.72□□□□□ -1.17
UBE2D3-212ENST00000502563 PPT1P50897 306 aa7.72□□□□□ -1.17
UBE2D3-212ENST00000502563 ZNF138P52744 262 aa7.72□□□□□ -1.17
UBE2D3-212ENST00000502563 PMS2P11Q13670 270 aa7.72□□□□□ -1.17
UBE2D3-212ENST00000502563 RBMY1FQ15415 496 aaKnown RBP7.72□□□□□ -1.17
UBE2D3-212ENST00000502563 RRN3P1Q2M238 152 aa7.72□□□□□ -1.17
UBE2D3-212ENST00000502563 ZFP69Q49AA0 526 aa7.72□□□□□ -1.17
UBE2D3-212ENST00000502563 SSX7Q7RTT5 188 aa7.72□□□□□ -1.17
UBE2D3-212ENST00000502563 C9orf62Q8N4C0 152 aa7.72□□□□□ -1.17
UBE2D3-212ENST00000502563 MAP1LC3BQ9GZQ8 125 aa7.72□□□□□ -1.17
UBE2D3-212ENST00000502563 IGKV2-40A0A087WW87 121 aaPredicted RBP7.71□□□□□ -1.18
UBE2D3-212ENST00000502563 K7EQM0 130 aa7.71□□□□□ -1.18
UBE2D3-212ENST00000502563 HMGB3O15347 200 aaKnown RBP7.71□□□□□ -1.18
UBE2D3-212ENST00000502563 ZNF324O75467 553 aaPredicted RBP7.71□□□□□ -1.18
UBE2D3-212ENST00000502563 IGKV2D-40P01614 121 aaPredicted RBP7.71□□□□□ -1.18
UBE2D3-212ENST00000502563 TCRAP04437 139 aa7.71□□□□□ -1.18
UBE2D3-212ENST00000502563 SULT1A2P50226 295 aa7.71□□□□□ -1.18
UBE2D3-212ENST00000502563 GFI1BQ5VTD9 330 aa7.71□□□□□ -1.18
UBE2D3-212ENST00000502563 ZFAND2AQ8N6M9 145 aa7.71□□□□□ -1.18
UBE2D3-212ENST00000502563 C11orf45Q8TAV5 145 aa7.71□□□□□ -1.18
UBE2D3-212ENST00000502563 TMEM263Q8WUH6 116 aaKnown RBP7.71□□□□□ -1.18
UBE2D3-212ENST00000502563 HIST1H2BAQ96A08 127 aa7.71□□□□□ -1.18
UBE2D3-212ENST00000502563 C16orf74Q96GX8 76 aa7.71□□□□□ -1.18
UBE2D3-212ENST00000502563 CSMD3Q7Z407 3707 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 hCG_2014768A0A024R1R8 64 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 C7orf71A4D174 169 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 FAM74A7A6NL05 159 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 LYRM9A8MSI8 78 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 GGTLC3B5MD39 225 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 SPART-AS1P0CW21 52 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 TCTAP57738 103 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 FXYD7P58549 80 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 ANXA2RQ3ZCQ2 193 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 Q6AWC8 147 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 CCDC28AQ8IWP9 274 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 CYB561D1Q8N8Q1 229 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 TMEM75Q8N9X5 138 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 RNASE8Q8TDE3 154 aaKnown RBP7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 VGLL1Q99990 258 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 TXNDC17Q9BRA2 123 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 NIPSNAP3BQ9BS92 247 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 ATG101Q9BSB4 218 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 TMEM208Q9BTX3 173 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 TP53TG3Q9ULZ0 132 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 EPDR1Q9UM22 224 aa7.7□□□□□ -1.18
UBE2D3-212ENST00000502563 TRAV12-2A0A075B6T6 113 aa7.69□□□□□ -1.18
UBE2D3-212ENST00000502563 LOC102723971A0A1B0GUV8 181 aa7.69□□□□□ -1.18
UBE2D3-212ENST00000502563 A0A1B0GVG6 124 aa7.69□□□□□ -1.18
UBE2D3-212ENST00000502563 TEX46H3BTG2 121 aa7.69□□□□□ -1.18
UBE2D3-212ENST00000502563 H2AFB1P0C5Y9 115 aa7.69□□□□□ -1.18
UBE2D3-212ENST00000502563 SUMO1P63165 101 aaKnown RBP7.69□□□□□ -1.18
UBE2D3-212ENST00000502563 TDRG1Q3Y452 100 aa7.69□□□□□ -1.18
UBE2D3-212ENST00000502563 COX8CQ7Z4L0 72 aa7.69□□□□□ -1.18
UBE2D3-212ENST00000502563 ZNF680Q8NEM1 530 aa7.69□□□□□ -1.18
UBE2D3-212ENST00000502563 DKK2Q9UBU2 259 aa7.69□□□□□ -1.18
UBE2D3-212ENST00000502563 TRBV6-1A0A0K0K1D8 114 aa7.68□□□□□ -1.18
UBE2D3-212ENST00000502563 PLAC8L1A1L4L8 177 aa7.68□□□□□ -1.18
UBE2D3-212ENST00000502563 CXorf65A6NEN9 183 aa7.68□□□□□ -1.18
UBE2D3-212ENST00000502563 EIF3GO75821 320 aaKnown RBP eCLIP7.68□□□□□ -1.18
UBE2D3-212ENST00000502563 GPX1P07203 203 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms