RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 RNF182Q8N6D2 247 aa12.77□□□□□ -0.36
VCAN-204ENST00000502527 TMEM208Q9BTX3 173 aa12.77□□□□□ -0.36
VCAN-204ENST00000502527 IGHV3OR16-10A0A075B7F0 116 aa12.77□□□□□ -0.37
VCAN-204ENST00000502527 MUC21A0A0G2JKD1 596 aa12.77□□□□□ -0.37
VCAN-204ENST00000502527 MUC21A0A140T8X8 626 aa12.77□□□□□ -0.37
VCAN-204ENST00000502527 FAM223BA6NKX1 122 aa12.77□□□□□ -0.37
VCAN-204ENST00000502527 MUC21Q5SSG8 566 aa12.77□□□□□ -0.37
VCAN-204ENST00000502527 FAM223AQ8IWN6 122 aa12.77□□□□□ -0.37
VCAN-204ENST00000502527 MRPL53Q96EL3 112 aaKnown RBP12.77□□□□□ -0.37
VCAN-204ENST00000502527 ZNF747Q9BV97 191 aa12.77□□□□□ -0.37
VCAN-204ENST00000502527 SIGLEC8Q9NYZ4 499 aa12.77□□□□□ -0.37
VCAN-204ENST00000502527 TIMM8BQ9Y5J9 83 aaPredicted RBP12.77□□□□□ -0.37
VCAN-204ENST00000502527 ITPR1Q14643 2758 aa12.77□□□□□ -0.37
VCAN-204ENST00000502527 CRIP2P52943 208 aaPredicted RBP12.76□□□□□ -0.37
VCAN-204ENST00000502527 C19orf54Q5BKX5 351 aa12.76□□□□□ -0.37
VCAN-204ENST00000502527 LINC01545Q5VT33 79 aa12.76□□□□□ -0.37
VCAN-204ENST00000502527 U3KQE9 123 aa12.76□□□□□ -0.37
VCAN-204ENST00000502527 IGHV3OR16-13A0A075B7E8 117 aa12.76□□□□□ -0.37
VCAN-204ENST00000502527 IGHV3-74A0A0B4J1X5 117 aa12.76□□□□□ -0.37
VCAN-204ENST00000502527 LOC389332A0A1B0GUA5 103 aa12.76□□□□□ -0.37
VCAN-204ENST00000502527 hDV102S1A0JD36 115 aa12.76□□□□□ -0.37
VCAN-204ENST00000502527 TFPI2P48307 235 aa12.76□□□□□ -0.37
VCAN-204ENST00000502527 GAGE1Q13065 139 aa12.76□□□□□ -0.37
VCAN-204ENST00000502527 LINC01559Q495D7 138 aa12.76□□□□□ -0.37
VCAN-204ENST00000502527 ZNF575Q86XF7 245 aa12.76□□□□□ -0.37
VCAN-204ENST00000502527 STPG4Q8N801 248 aa12.76□□□□□ -0.37
VCAN-204ENST00000502527 PIFOQ8TCI5 191 aa12.76□□□□□ -0.37
VCAN-204ENST00000502527 DLEU1O43261 78 aa12.75□□□□□ -0.37
VCAN-204ENST00000502527 CKS2P33552 79 aa12.75□□□□□ -0.37
VCAN-204ENST00000502527 CCL19Q99731 98 aa12.75□□□□□ -0.37
VCAN-204ENST00000502527 CNFNQ9BYD5 112 aa12.75□□□□□ -0.37
VCAN-204ENST00000502527 MEGF9Q9H1U4 602 aa12.75□□□□□ -0.37
VCAN-204ENST00000502527 TRAV8-2A0A0B4J237 113 aa12.74□□□□□ -0.37
VCAN-204ENST00000502527 IGHV4-61A0A0C4DH41 118 aa12.74□□□□□ -0.37
VCAN-204ENST00000502527 H0Y8G0 127 aa12.74□□□□□ -0.37
VCAN-204ENST00000502527 ZNF207O43670 478 aaKnown RBP12.74□□□□□ -0.37
VCAN-204ENST00000502527 IL17RELQ6ZVW7 336 aa12.74□□□□□ -0.37
VCAN-204ENST00000502527 AGPAT4-IT1Q9H0P7 198 aa12.74□□□□□ -0.37
VCAN-204ENST00000502527 HIF1ANQ9NWT6 349 aa12.74□□□□□ -0.37
VCAN-204ENST00000502527 ASH1LQ9NR48 2969 aaKnown RBP12.74□□□□□ -0.37
VCAN-204ENST00000502527 IGHV3-49A0A0A0MS15 119 aa12.74□□□□□ -0.37
VCAN-204ENST00000502527 TRAV40A0A0B4J280 105 aa12.74□□□□□ -0.37
VCAN-204ENST00000502527 NDUFS8O00217 210 aa12.74□□□□□ -0.37
VCAN-204ENST00000502527 TRGV3P03979 118 aa12.74□□□□□ -0.37
VCAN-204ENST00000502527 HINT1P49773 126 aaPredicted RBP12.74□□□□□ -0.37
VCAN-204ENST00000502527 HIST1H1AQ02539 215 aaPredicted RBP12.74□□□□□ -0.37
VCAN-204ENST00000502527 TMEM78Q5T7P6 136 aa12.74□□□□□ -0.37
VCAN-204ENST00000502527 BRD3OSQ6XYD6 125 aa12.74□□□□□ -0.37
VCAN-204ENST00000502527 C8orf86Q6ZUL3 223 aa12.74□□□□□ -0.37
VCAN-204ENST00000502527 C10orf105Q8TEF2 133 aa12.74□□□□□ -0.37
VCAN-204ENST00000502527 MS4A6AQ9H2W1 248 aa12.74□□□□□ -0.37
VCAN-204ENST00000502527 FAM106AQ4KMX7 169 aa12.73□□□□□ -0.37
VCAN-204ENST00000502527 PSMG3-AS1Q96PY0 264 aa12.73□□□□□ -0.37
VCAN-204ENST00000502527 MCRIP2Q9BUT9 160 aaKnown RBP12.73□□□□□ -0.37
VCAN-204ENST00000502527 LINC00527Q9UJ94 153 aa12.73□□□□□ -0.37
VCAN-204ENST00000502527 PPBPP02775 128 aa12.72□□□□□ -0.37
VCAN-204ENST00000502527 LOXL1Q08397 574 aaPredicted RBP12.72□□□□□ -0.37
VCAN-204ENST00000502527 SLC25A34Q6PIV7 304 aa12.72□□□□□ -0.37
VCAN-204ENST00000502527 A0A096LNJ9 63 aa12.71□□□□□ -0.37
VCAN-204ENST00000502527 IGF1P05019 195 aa12.71□□□□□ -0.37
VCAN-204ENST00000502527 ARL3P36405 182 aa12.71□□□□□ -0.37
VCAN-204ENST00000502527 CLEC2AQ6UVW9 174 aa12.71□□□□□ -0.37
VCAN-204ENST00000502527 GOLT1BQ9Y3E0 138 aa12.71□□□□□ -0.37
VCAN-204ENST00000502527 CSMD1Q96PZ7 3565 aa12.71□□□□□ -0.37
VCAN-204ENST00000502527 NPYP01303 97 aa12.71□□□□□ -0.38
VCAN-204ENST00000502527 C9orf47Q6ZRZ4 202 aa12.71□□□□□ -0.38
VCAN-204ENST00000502527 PMCHL2Q9BQD1 86 aa12.71□□□□□ -0.38
VCAN-204ENST00000502527 SCRT2Q9NQ03 307 aa12.71□□□□□ -0.38
VCAN-204ENST00000502527 MSRB1Q9NZV6 116 aa12.71□□□□□ -0.38
VCAN-204ENST00000502527 AKAP6Q13023 2319 aa12.7□□□□□ -0.38
VCAN-204ENST00000502527 SMKR1H3BMG3 65 aa12.7□□□□□ -0.38
VCAN-204ENST00000502527 HBDP02042 147 aa12.7□□□□□ -0.38
VCAN-204ENST00000502527 ZNF124Q15973 351 aa12.7□□□□□ -0.38
VCAN-204ENST00000502527 RNF185Q96GF1 192 aa12.7□□□□□ -0.38
VCAN-204ENST00000502527 PPP1R14DQ9NXH3 145 aa12.7□□□□□ -0.38
VCAN-204ENST00000502527 TCF21O43680 179 aa12.69□□□□□ -0.38
VCAN-204ENST00000502527 IGHV4-38-2P0DP08 117 aa12.69□□□□□ -0.38
VCAN-204ENST00000502527 OR8A1Q8NGG7 326 aa12.69□□□□□ -0.38
VCAN-204ENST00000502527 GLMPQ8WWB7 406 aa12.69□□□□□ -0.38
VCAN-204ENST00000502527 C16orf92Q96LL3 132 aa12.69□□□□□ -0.38
VCAN-204ENST00000502527 IGKV3D-20A0A0C4DH25 116 aa12.69□□□□□ -0.38
VCAN-204ENST00000502527 H3BUA1 57 aa12.69□□□□□ -0.38
VCAN-204ENST00000502527 BRI3O95415 125 aa12.69□□□□□ -0.38
VCAN-204ENST00000502527 NCR2O95944 276 aa12.69□□□□□ -0.38
VCAN-204ENST00000502527 ATP5J2P56134 94 aa12.69□□□□□ -0.38
VCAN-204ENST00000502527 PRSS57Q6UWY2 283 aa12.69□□□□□ -0.38
VCAN-204ENST00000502527 USMG5Q96IX5 58 aa12.69□□□□□ -0.38
VCAN-204ENST00000502527 MAP1LC3AQ9H492 121 aa12.69□□□□□ -0.38
VCAN-204ENST00000502527 NDUFA4O00483 81 aa12.68□□□□□ -0.38
VCAN-204ENST00000502527 C9orf139Q6ZV77 190 aa12.68□□□□□ -0.38
VCAN-204ENST00000502527 CACNA1BQ00975 2339 aa12.68□□□□□ -0.38
VCAN-204ENST00000502527 A6NDX4 124 aa12.68□□□□□ -0.38
VCAN-204ENST00000502527 IGHG2P01859 326 aa12.68□□□□□ -0.38
VCAN-204ENST00000502527 LY6EQ16553 131 aa12.68□□□□□ -0.38
VCAN-204ENST00000502527 SVIPQ8NHG7 77 aa12.68□□□□□ -0.38
VCAN-204ENST00000502527 C11orf21Q9P2W6 132 aa12.68□□□□□ -0.38
VCAN-204ENST00000502527 NPSP0C0P6 89 aa12.67□□□□□ -0.38
VCAN-204ENST00000502527 PPIFP30405 207 aaKnown RBP12.67□□□□□ -0.38
VCAN-204ENST00000502527 LGALS9BQ3B8N2 356 aa12.67□□□□□ -0.38
VCAN-204ENST00000502527 LGALS9CQ6DKI2 356 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms