RNA–Protein interactions for RNA: ENST00000498579.5

ECM1-207, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 943 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-207ENST00000498579 CCL18P55774 89 aa13.21□□□□□ -0.29
ECM1-207ENST00000498579 ICAM4Q14773 271 aa13.21□□□□□ -0.29
ECM1-207ENST00000498579 TMEM78Q5T7P6 136 aa13.21□□□□□ -0.29
ECM1-207ENST00000498579 Q6ZR54 194 aa13.21□□□□□ -0.29
ECM1-207ENST00000498579 C9orf47Q6ZRZ4 202 aa13.21□□□□□ -0.29
ECM1-207ENST00000498579 EXOC3-AS1Q8N2X6 119 aa13.21□□□□□ -0.29
ECM1-207ENST00000498579 LINC00612Q8N6U2 182 aa13.21□□□□□ -0.29
ECM1-207ENST00000498579 SCGB1C1Q8TD33 95 aa13.21□□□□□ -0.29
ECM1-207ENST00000498579 HSPB11Q9Y547 144 aa13.21□□□□□ -0.29
ECM1-207ENST00000498579 PRSS29PA6NIE9 313 aa13.2□□□□□ -0.3
ECM1-207ENST00000498579 CRISP2P16562 243 aa13.2□□□□□ -0.3
ECM1-207ENST00000498579 TAS2R45P59539 299 aa13.2□□□□□ -0.3
ECM1-207ENST00000498579 DAZ2Q13117 558 aaKnown RBP13.2□□□□□ -0.3
ECM1-207ENST00000498579 ERCC8Q13216 396 aa13.2□□□□□ -0.3
ECM1-207ENST00000498579 RNF141Q8WVD5 230 aa13.2□□□□□ -0.3
ECM1-207ENST00000498579 FAM19A4Q96LR4 140 aa13.2□□□□□ -0.3
ECM1-207ENST00000498579 LINC00467Q9BRT7 94 aa13.2□□□□□ -0.3
ECM1-207ENST00000498579 OR7C2O60412 319 aa13.19□□□□□ -0.3
ECM1-207ENST00000498579 RPL12P30050 165 aaKnown RBP13.19□□□□□ -0.3
ECM1-207ENST00000498579 CSN1S1P47710 185 aa13.19□□□□□ -0.3
ECM1-207ENST00000498579 FAM122CQ6P4D5 195 aa13.19□□□□□ -0.3
ECM1-207ENST00000498579 LYPD1Q8N2G4 141 aa13.19□□□□□ -0.3
ECM1-207ENST00000498579 ZNF503Q96F45 646 aa13.19□□□□□ -0.3
ECM1-207ENST00000498579 AGPAT4-IT1Q9H0P7 198 aa13.19□□□□□ -0.3
ECM1-207ENST00000498579 TRBV7-9A0A0J9YWB2 115 aa13.18□□□□□ -0.3
ECM1-207ENST00000498579 RTL8CO15255 209 aa13.18□□□□□ -0.3
ECM1-207ENST00000498579 GPX1P07203 203 aa13.18□□□□□ -0.3
ECM1-207ENST00000498579 M6PRP20645 277 aa13.18□□□□□ -0.3
ECM1-207ENST00000498579 ANXA2RQ3ZCQ2 193 aa13.18□□□□□ -0.3
ECM1-207ENST00000498579 KHDC3LQ587J8 217 aa13.18□□□□□ -0.3
ECM1-207ENST00000498579 FXYD5Q96DB9 178 aa13.18□□□□□ -0.3
ECM1-207ENST00000498579 GAGE12BA1L429 117 aa13.17□□□□□ -0.3
ECM1-207ENST00000498579 GAGE7O76087 117 aa13.17□□□□□ -0.3
ECM1-207ENST00000498579 OR10J4P0C629 311 aa13.17□□□□□ -0.3
ECM1-207ENST00000498579 GAGE12FP0CL80 117 aa13.17□□□□□ -0.3
ECM1-207ENST00000498579 GAGE12GP0CL81 117 aa13.17□□□□□ -0.3
ECM1-207ENST00000498579 GAGE12IP0CL82 117 aa13.17□□□□□ -0.3
ECM1-207ENST00000498579 OR5I1Q13606 314 aa13.17□□□□□ -0.3
ECM1-207ENST00000498579 FFAR4Q5NUL3 377 aa13.17□□□□□ -0.3
ECM1-207ENST00000498579 C1orf134Q5TEV5 83 aa13.17□□□□□ -0.3
ECM1-207ENST00000498579 EIF4E3Q8N5X7 224 aaKnown RBP13.17□□□□□ -0.3
ECM1-207ENST00000498579 GNPNAT1Q96EK6 184 aaPredicted RBP13.17□□□□□ -0.3
ECM1-207ENST00000498579 MBD2Q9UBB5 411 aa13.17□□□□□ -0.3
ECM1-207ENST00000498579 IGKV2-40A0A087WW87 121 aaPredicted RBP13.16□□□□□ -0.3
ECM1-207ENST00000498579 RBAKDNA6NC62 111 aa13.16□□□□□ -0.3
ECM1-207ENST00000498579 H3BNG1 76 aa13.16□□□□□ -0.3
ECM1-207ENST00000498579 ZNF324O75467 553 aaPredicted RBP13.16□□□□□ -0.3
ECM1-207ENST00000498579 IGKV2D-40P01614 121 aaPredicted RBP13.16□□□□□ -0.3
ECM1-207ENST00000498579 RNASE4P34096 147 aaKnown RBP13.16□□□□□ -0.3
ECM1-207ENST00000498579 UBE2L3P68036 154 aaKnown RBP13.16□□□□□ -0.3
ECM1-207ENST00000498579 BTN1A1Q13410 526 aa13.16□□□□□ -0.3
ECM1-207ENST00000498579 RXFP4Q8TDU9 374 aa13.16□□□□□ -0.3
ECM1-207ENST00000498579 C18orf15Q96N68 181 aa13.16□□□□□ -0.3
ECM1-207ENST00000498579 ZNF492Q9P255 531 aa13.16□□□□□ -0.3
ECM1-207ENST00000498579 TRAV26-1A0A087WT03 109 aa13.15□□□□□ -0.3
ECM1-207ENST00000498579 A0A1B0GVY2 172 aa13.15□□□□□ -0.3
ECM1-207ENST00000498579 RGS13O14921 159 aa13.15□□□□□ -0.3
ECM1-207ENST00000498579 ZNF138P52744 262 aa13.15□□□□□ -0.3
ECM1-207ENST00000498579 CD300CQ08708 224 aa13.15□□□□□ -0.3
ECM1-207ENST00000498579 IBA57Q5T440 356 aaKnown RBP13.15□□□□□ -0.3
ECM1-207ENST00000498579 PHYHIPLQ96FC7 376 aa13.15□□□□□ -0.3
ECM1-207ENST00000498579 TRGV2A0A075B6R0 118 aa13.14□□□□□ -0.31
ECM1-207ENST00000498579 RANP62826 216 aaKnown RBP13.14□□□□□ -0.31
ECM1-207ENST00000498579 ACOT6Q3I5F7 207 aaPredicted RBP13.14□□□□□ -0.31
ECM1-207ENST00000498579 ZFAND2AQ8N6M9 145 aa13.14□□□□□ -0.31
ECM1-207ENST00000498579 ZNRF2Q8NHG8 242 aa13.14□□□□□ -0.31
ECM1-207ENST00000498579 VGLL1Q99990 258 aa13.14□□□□□ -0.31
ECM1-207ENST00000498579 SMIM3Q9BZL3 60 aa13.14□□□□□ -0.31
ECM1-207ENST00000498579 GSN-AS1Q9NRJ2 163 aa13.14□□□□□ -0.31
ECM1-207ENST00000498579 DNAH2Q9P225 4427 aa13.13□□□□□ -0.31
ECM1-207ENST00000498579 TCL1AP56279 114 aa13.13□□□□□ -0.31
ECM1-207ENST00000498579 FAM74A1Q5RGS3 127 aa13.13□□□□□ -0.31
ECM1-207ENST00000498579 C11orf72Q8NBR9 251 aa13.13□□□□□ -0.31
ECM1-207ENST00000498579 ARPC5LQ9BPX5 153 aa13.13□□□□□ -0.31
ECM1-207ENST00000498579 Q9H3A6 140 aa13.13□□□□□ -0.31
ECM1-207ENST00000498579 FAT2Q9NYQ8 4349 aa13.12□□□□□ -0.31
ECM1-207ENST00000498579 TRGV1A0A0A0MS02 117 aa13.12□□□□□ -0.31
ECM1-207ENST00000498579 NBDYA0A0U1RRE5 68 aa13.12□□□□□ -0.31
ECM1-207ENST00000498579 PTTG1O95997 202 aa13.12□□□□□ -0.31
ECM1-207ENST00000498579 ZNF266Q14584 549 aa13.12□□□□□ -0.31
ECM1-207ENST00000498579 PQLC2Q6ZP29 291 aa13.12□□□□□ -0.31
ECM1-207ENST00000498579 Q6ZTI0 123 aa13.12□□□□□ -0.31
ECM1-207ENST00000498579 SSX7Q7RTT5 188 aa13.12□□□□□ -0.31
ECM1-207ENST00000498579 LINC00588Q9Y4M8 146 aa13.12□□□□□ -0.31
ECM1-207ENST00000498579 LENEPQ9Y5L5 61 aa13.12□□□□□ -0.31
ECM1-207ENST00000498579 IGHV1OR15-1A0A075B7D0 117 aa13.11□□□□□ -0.31
ECM1-207ENST00000498579 A0A1W2PPV4 95 aa13.11□□□□□ -0.31
ECM1-207ENST00000498579 CMTM2Q8TAZ6 248 aa13.11□□□□□ -0.31
ECM1-207ENST00000498579 TMPRSS5Q9H3S3 457 aa13.11□□□□□ -0.31
ECM1-207ENST00000498579 A0A0J9YY99 117 aa13.1□□□□□ -0.31
ECM1-207ENST00000498579 SPINK4O60575 86 aa13.1□□□□□ -0.31
ECM1-207ENST00000498579 HOXA5P20719 270 aa13.1□□□□□ -0.31
ECM1-207ENST00000498579 TTC32Q5I0X7 151 aa13.1□□□□□ -0.31
ECM1-207ENST00000498579 ARL6IP6Q8N6S5 226 aa13.1□□□□□ -0.31
ECM1-207ENST00000498579 TMED6Q8WW62 240 aa13.1□□□□□ -0.31
ECM1-207ENST00000498579 OTORQ9NRC9 128 aa13.1□□□□□ -0.31
ECM1-207ENST00000498579 ALG5Q9Y673 324 aa13.1□□□□□ -0.31
ECM1-207ENST00000498579 DIRC3C9JPN6 131 aa13.09□□□□□ -0.31
ECM1-207ENST00000498579 ZNF415Q09FC8 603 aa13.09□□□□□ -0.31
ECM1-207ENST00000498579 Q8TAT8 98 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms