RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 TRGV9Q99603 122 aa9.2□□□□□ -0.94
PBX1-211ENST00000498497 MLST8Q9BVC4 326 aa9.2□□□□□ -0.94
PBX1-211ENST00000498497 PTPRQQ9UMZ3 2332 aa9.2□□□□□ -0.94
PBX1-211ENST00000498497 TRBV7-3A0A075B6L6 115 aa9.2□□□□□ -0.94
PBX1-211ENST00000498497 MYCNOSP40205 109 aa9.2□□□□□ -0.94
PBX1-211ENST00000498497 HERVK_113P61574 105 aa9.2□□□□□ -0.94
PBX1-211ENST00000498497 PCOLCEQ15113 449 aa9.2□□□□□ -0.94
PBX1-211ENST00000498497 SLC25A48Q6ZT89 311 aaKnown RBP9.2□□□□□ -0.94
PBX1-211ENST00000498497 TMEM101Q96IK0 257 aa9.2□□□□□ -0.94
PBX1-211ENST00000498497 DNAJC30Q96LL9 226 aa9.2□□□□□ -0.94
PBX1-211ENST00000498497 S4R3C0 116 aa9.2□□□□□ -0.94
PBX1-211ENST00000498497 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.19□□□□□ -0.94
PBX1-211ENST00000498497 MRPS12O15235 138 aaKnown RBP9.19□□□□□ -0.94
PBX1-211ENST00000498497 ZNF22P17026 224 aaPredicted RBP9.19□□□□□ -0.94
PBX1-211ENST00000498497 EDN2P20800 178 aa9.19□□□□□ -0.94
PBX1-211ENST00000498497 CD40P25942 277 aa9.19□□□□□ -0.94
PBX1-211ENST00000498497 OR4C13Q8NGP0 309 aa9.19□□□□□ -0.94
PBX1-211ENST00000498497 Q8TAT8 98 aa9.19□□□□□ -0.94
PBX1-211ENST00000498497 PRADC1Q9BSG0 188 aa9.19□□□□□ -0.94
PBX1-211ENST00000498497 IGHV3-64A0A075B6Q5 118 aa9.19□□□□□ -0.94
PBX1-211ENST00000498497 ELANEP08246 267 aa9.19□□□□□ -0.94
PBX1-211ENST00000498497 FAM104BQ5XKR9 115 aa9.19□□□□□ -0.94
PBX1-211ENST00000498497 ZNRF1Q8ND25 227 aa9.19□□□□□ -0.94
PBX1-211ENST00000498497 LINC00477Q96M19 166 aa9.19□□□□□ -0.94
PBX1-211ENST00000498497 TRBV6-6A0A0A6YYG2 114 aa9.18□□□□□ -0.94
PBX1-211ENST00000498497 DLL1O00548 723 aa9.18□□□□□ -0.94
PBX1-211ENST00000498497 EEF1AKMT3Q96AZ1 226 aa9.18□□□□□ -0.94
PBX1-211ENST00000498497 RFPL3SP0C7P2 107 aa9.18□□□□□ -0.94
PBX1-211ENST00000498497 FAM201AQ5SY85 155 aa9.18□□□□□ -0.94
PBX1-211ENST00000498497 C6orf15Q6UXA7 325 aaPredicted RBP9.18□□□□□ -0.94
PBX1-211ENST00000498497 LINC00527Q9UJ94 153 aa9.18□□□□□ -0.94
PBX1-211ENST00000498497 NACAE9PAV3 2078 aa9.18□□□□□ -0.94
PBX1-211ENST00000498497 SRRM4A7MD48 611 aaKnown RBP9.18□□□□□ -0.94
PBX1-211ENST00000498497 LGALS1P09382 135 aaKnown RBP9.18□□□□□ -0.94
PBX1-211ENST00000498497 EIF4EBP1Q13541 118 aaPredicted RBP9.18□□□□□ -0.94
PBX1-211ENST00000498497 TMEM240Q5SV17 173 aa9.18□□□□□ -0.94
PBX1-211ENST00000498497 RNF152Q8N8N0 203 aa9.18□□□□□ -0.94
PBX1-211ENST00000498497 DEFB108BQ8NET1 73 aa9.18□□□□□ -0.94
PBX1-211ENST00000498497 PTPRZ1P23471 2315 aaPredicted RBP9.18□□□□□ -0.94
PBX1-211ENST00000498497 DNPH1O43598 174 aa9.17□□□□□ -0.94
PBX1-211ENST00000498497 PRB3Q04118 309 aaPredicted RBP9.17□□□□□ -0.94
PBX1-211ENST00000498497 IGHV3OR16-8A0A075B7F1 116 aa9.17□□□□□ -0.94
PBX1-211ENST00000498497 hADV29S1A0JD25 119 aa9.17□□□□□ -0.94
PBX1-211ENST00000498497 J3KT08 172 aa9.17□□□□□ -0.94
PBX1-211ENST00000498497 ORM1P02763 201 aa9.17□□□□□ -0.94
PBX1-211ENST00000498497 LIFP15018 202 aa9.17□□□□□ -0.94
PBX1-211ENST00000498497 NPC2P61916 151 aa9.17□□□□□ -0.94
PBX1-211ENST00000498497 CD69Q07108 199 aa9.17□□□□□ -0.94
PBX1-211ENST00000498497 PRDM14Q9GZV8 571 aa9.17□□□□□ -0.94
PBX1-211ENST00000498497 NDUFA7O95182 113 aa9.16□□□□□ -0.94
PBX1-211ENST00000498497 MAGEA5P43359 124 aa9.16□□□□□ -0.94
PBX1-211ENST00000498497 FMC1Q96HJ9 113 aa9.16□□□□□ -0.94
PBX1-211ENST00000498497 ZNF256Q9Y2P7 627 aaPredicted RBP9.16□□□□□ -0.94
PBX1-211ENST00000498497 ADGRG4Q8IZF6 3080 aa9.16□□□□□ -0.94
PBX1-211ENST00000498497 TRAV12-3A0A0B4J271 114 aa9.16□□□□□ -0.94
PBX1-211ENST00000498497 SAA2P0DJI9 122 aaPredicted RBP9.16□□□□□ -0.94
PBX1-211ENST00000498497 CRIP1P50238 77 aa9.16□□□□□ -0.94
PBX1-211ENST00000498497 TMEM126AQ9H061 195 aa9.16□□□□□ -0.94
PBX1-211ENST00000498497 SSUH2Q9Y2M2 353 aa9.16□□□□□ -0.94
PBX1-211ENST00000498497 CHCHD2Q9Y6H1 151 aaPredicted RBP9.16□□□□□ -0.94
PBX1-211ENST00000498497 ERCC8Q13216 396 aa9.16□□□□□ -0.94
PBX1-211ENST00000498497 IL11RAQ14626 422 aa9.16□□□□□ -0.94
PBX1-211ENST00000498497 Q6ZS46 218 aa9.16□□□□□ -0.94
PBX1-211ENST00000498497 OR13C6PQ8NH95 151 aa9.16□□□□□ -0.94
PBX1-211ENST00000498497 A0A1W2PR77 199 aa9.15□□□□□ -0.94
PBX1-211ENST00000498497 MBD3L4A6NDZ8 208 aaPredicted RBP9.15□□□□□ -0.94
PBX1-211ENST00000498497 MBD3L3A6NE82 208 aaPredicted RBP9.15□□□□□ -0.94
PBX1-211ENST00000498497 MBD3L5A6NJ08 208 aaPredicted RBP9.15□□□□□ -0.94
PBX1-211ENST00000498497 MRPL32Q9BYC8 188 aaKnown RBP9.15□□□□□ -0.94
PBX1-211ENST00000498497 CD3EP07766 207 aa9.15□□□□□ -0.95
PBX1-211ENST00000498497 ZNF785A8K8V0 405 aa9.14□□□□□ -0.95
PBX1-211ENST00000498497 RNASE2P10153 161 aaKnown RBP9.14□□□□□ -0.95
PBX1-211ENST00000498497 GAGE2AQ6NT46 116 aa9.14□□□□□ -0.95
PBX1-211ENST00000498497 SORL1Q92673 2214 aa9.14□□□□□ -0.95
PBX1-211ENST00000498497 NOTCH3Q9UM47 2321 aa9.14□□□□□ -0.95
PBX1-211ENST00000498497 IGHV3-72A0A0B4J1Y9 119 aa9.14□□□□□ -0.95
PBX1-211ENST00000498497 SPTY2D1-AS1A0A0U1RR47 76 aa9.14□□□□□ -0.95
PBX1-211ENST00000498497 CXCL12P48061 93 aa9.14□□□□□ -0.95
PBX1-211ENST00000498497 MNX1P50219 401 aaPredicted RBP9.14□□□□□ -0.95
PBX1-211ENST00000498497 NDUFA11Q86Y39 141 aa9.14□□□□□ -0.95
PBX1-211ENST00000498497 CYSTM1Q9H1C7 97 aa9.14□□□□□ -0.95
PBX1-211ENST00000498497 ABCA4P78363 2273 aa9.14□□□□□ -0.95
PBX1-211ENST00000498497 H7C1H1 209 aa9.14□□□□□ -0.95
PBX1-211ENST00000498497 DUSP14O95147 198 aaKnown RBP9.14□□□□□ -0.95
PBX1-211ENST00000498497 NFAM1Q8NET5 270 aaPredicted RBP9.14□□□□□ -0.95
PBX1-211ENST00000498497 NXT2Q9NPJ8 142 aaKnown RBP9.14□□□□□ -0.95
PBX1-211ENST00000498497 IGKV2-40A0A087WW87 121 aaPredicted RBP9.13□□□□□ -0.95
PBX1-211ENST00000498497 INS-IGF2F8WCM5 200 aa9.13□□□□□ -0.95
PBX1-211ENST00000498497 IGKV2D-40P01614 121 aaPredicted RBP9.13□□□□□ -0.95
PBX1-211ENST00000498497 CECR9P0C854 216 aa9.13□□□□□ -0.95
PBX1-211ENST00000498497 SAA1P0DJI8 122 aaPredicted RBP9.13□□□□□ -0.95
PBX1-211ENST00000498497 KLRB1Q12918 225 aa9.13□□□□□ -0.95
PBX1-211ENST00000498497 LINC00596Q86U02 117 aa9.13□□□□□ -0.95
PBX1-211ENST00000498497 GFRA4Q9GZZ7 299 aa9.13□□□□□ -0.95
PBX1-211ENST00000498497 TMEM14BQ9NUH8 114 aa9.13□□□□□ -0.95
PBX1-211ENST00000498497 A0A1W2PPI3 338 aa9.13□□□□□ -0.95
PBX1-211ENST00000498497 CNTFRP26992 372 aa9.13□□□□□ -0.95
PBX1-211ENST00000498497 KIR2DS2P43631 304 aa9.13□□□□□ -0.95
PBX1-211ENST00000498497 A0A0U1RQV1 116 aa9.12□□□□□ -0.95
PBX1-211ENST00000498497 TIMM23O14925 209 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms