RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 FAM74A1Q5RGS3 127 aa11.72□□□□□ -0.53
FAM3A-220ENST00000497506 EIF5AL1Q6IS14 154 aaKnown RBP11.72□□□□□ -0.53
FAM3A-220ENST00000497506 ARL6IP6Q8N6S5 226 aa11.72□□□□□ -0.53
FAM3A-220ENST00000497506 FAM19A4Q96LR4 140 aa11.72□□□□□ -0.53
FAM3A-220ENST00000497506 NEU1Q99519 415 aa11.72□□□□□ -0.53
FAM3A-220ENST00000497506 IGHV3OR16-12A0A075B7B8 117 aa11.71□□□□□ -0.53
FAM3A-220ENST00000497506 IGHV4-28A0A0C4DH34 117 aa11.71□□□□□ -0.53
FAM3A-220ENST00000497506 A0A1W2PRE2 83 aa11.71□□□□□ -0.53
FAM3A-220ENST00000497506 GGTLC3B5MD39 225 aa11.71□□□□□ -0.53
FAM3A-220ENST00000497506 INSP01308 110 aa11.71□□□□□ -0.53
FAM3A-220ENST00000497506 SLC25A5P05141 298 aaKnown RBP11.71□□□□□ -0.53
FAM3A-220ENST00000497506 TSPOP30536 169 aa11.71□□□□□ -0.53
FAM3A-220ENST00000497506 LEPP41159 167 aa11.71□□□□□ -0.53
FAM3A-220ENST00000497506 SUMO1P63165 101 aaKnown RBP11.71□□□□□ -0.53
FAM3A-220ENST00000497506 CMTM2Q8TAZ6 248 aa11.71□□□□□ -0.53
FAM3A-220ENST00000497506 C11orf68Q9H3H3 251 aaKnown RBP11.71□□□□□ -0.53
FAM3A-220ENST00000497506 ZNF492Q9P255 531 aa11.71□□□□□ -0.53
FAM3A-220ENST00000497506 GOLT1BQ9Y3E0 138 aa11.71□□□□□ -0.53
FAM3A-220ENST00000497506 YTHDF2Q9Y5A9 579 aaKnown RBP11.71□□□□□ -0.53
FAM3A-220ENST00000497506 DEFB4AO15263 64 aa11.7□□□□□ -0.54
FAM3A-220ENST00000497506 SULT1A2P50226 295 aa11.7□□□□□ -0.54
FAM3A-220ENST00000497506 GNG5P63218 68 aa11.7□□□□□ -0.54
FAM3A-220ENST00000497506 TMEM78Q5T7P6 136 aa11.7□□□□□ -0.54
FAM3A-220ENST00000497506 SFT2D1Q8WV19 159 aa11.7□□□□□ -0.54
FAM3A-220ENST00000497506 RPH3ALQ9UNE2 315 aa11.7□□□□□ -0.54
FAM3A-220ENST00000497506 BOLA1Q9Y3E2 137 aa11.7□□□□□ -0.54
FAM3A-220ENST00000497506 SMIM9A6NGZ8 99 aa11.69□□□□□ -0.54
FAM3A-220ENST00000497506 FAM74A7A6NL05 159 aa11.69□□□□□ -0.54
FAM3A-220ENST00000497506 H2AFB1P0C5Y9 115 aa11.69□□□□□ -0.54
FAM3A-220ENST00000497506 CRISP2P16562 243 aa11.69□□□□□ -0.54
FAM3A-220ENST00000497506 RAB5CP51148 216 aa11.69□□□□□ -0.54
FAM3A-220ENST00000497506 ZNF138P52744 262 aa11.69□□□□□ -0.54
FAM3A-220ENST00000497506 UBE2G2P60604 165 aa11.69□□□□□ -0.54
FAM3A-220ENST00000497506 GFI1BQ5VTD9 330 aa11.69□□□□□ -0.54
FAM3A-220ENST00000497506 GOLT1AQ6ZVE7 132 aa11.69□□□□□ -0.54
FAM3A-220ENST00000497506 C5orf17Q8NAS9 161 aa11.69□□□□□ -0.54
FAM3A-220ENST00000497506 Q8TAT8 98 aa11.69□□□□□ -0.54
FAM3A-220ENST00000497506 DNAH7Q8WXX0 4024 aa11.68□□□□□ -0.54
FAM3A-220ENST00000497506 KLLNB2CW77 178 aa11.68□□□□□ -0.54
FAM3A-220ENST00000497506 J3KRW8 73 aa11.68□□□□□ -0.54
FAM3A-220ENST00000497506 ZFAND2AQ8N6M9 145 aa11.68□□□□□ -0.54
FAM3A-220ENST00000497506 MUC7Q8TAX7 377 aa11.68□□□□□ -0.54
FAM3A-220ENST00000497506 C20orf144Q9BQM9 153 aa11.68□□□□□ -0.54
FAM3A-220ENST00000497506 TMEM208Q9BTX3 173 aa11.68□□□□□ -0.54
FAM3A-220ENST00000497506 EPDR1Q9UM22 224 aa11.68□□□□□ -0.54
FAM3A-220ENST00000497506 TRBV7-9A0A0J9YWB2 115 aa11.67□□□□□ -0.54
FAM3A-220ENST00000497506 A0A1B0GV50 99 aa11.67□□□□□ -0.54
FAM3A-220ENST00000497506 TCRAP04437 139 aa11.67□□□□□ -0.54
FAM3A-220ENST00000497506 PRM2P04554 102 aa11.67□□□□□ -0.54
FAM3A-220ENST00000497506 NMBP08949 121 aa11.67□□□□□ -0.54
FAM3A-220ENST00000497506 TMEM256Q8N2U0 113 aa11.67□□□□□ -0.54
FAM3A-220ENST00000497506 IL17DQ8TAD2 202 aa11.67□□□□□ -0.54
FAM3A-220ENST00000497506 TRAV1-1A0A0B4J248 108 aa11.66□□□□□ -0.54
FAM3A-220ENST00000497506 HBE1P02100 147 aa11.66□□□□□ -0.54
FAM3A-220ENST00000497506 PRR9Q5T870 116 aa11.66□□□□□ -0.54
FAM3A-220ENST00000497506 LINC01587Q99440 93 aa11.66□□□□□ -0.54
FAM3A-220ENST00000497506 NKX6-2Q9C056 277 aaPredicted RBP11.66□□□□□ -0.54
FAM3A-220ENST00000497506 TRAV8-1A0A0A6YYK1 113 aa11.65□□□□□ -0.54
FAM3A-220ENST00000497506 TRAV12-3A0A0B4J271 114 aa11.65□□□□□ -0.54
FAM3A-220ENST00000497506 SERTM2A0A1B0GWG4 89 aa11.65□□□□□ -0.54
FAM3A-220ENST00000497506 C7orf71A4D174 169 aa11.65□□□□□ -0.54
FAM3A-220ENST00000497506 ZNF705GA8MUZ8 300 aaPredicted RBP11.65□□□□□ -0.54
FAM3A-220ENST00000497506 GPX1P07203 203 aa11.65□□□□□ -0.54
FAM3A-220ENST00000497506 CCL20P78556 96 aa11.65□□□□□ -0.54
FAM3A-220ENST00000497506 BTN1A1Q13410 526 aa11.65□□□□□ -0.54
FAM3A-220ENST00000497506 RRN3P1Q2M238 152 aa11.65□□□□□ -0.54
FAM3A-220ENST00000497506 CCDC28AQ8IWP9 274 aa11.65□□□□□ -0.54
FAM3A-220ENST00000497506 LENEPQ9Y5L5 61 aa11.65□□□□□ -0.54
FAM3A-220ENST00000497506 ARL2-SNX15V9GYD0 113 aa11.65□□□□□ -0.54
FAM3A-220ENST00000497506 LOC102723971A0A1B0GUV8 181 aa11.64□□□□□ -0.55
FAM3A-220ENST00000497506 H7BYZ3 331 aa11.64□□□□□ -0.55
FAM3A-220ENST00000497506 PAGE4O60829 102 aa11.64□□□□□ -0.55
FAM3A-220ENST00000497506 ZNF324O75467 553 aaPredicted RBP11.64□□□□□ -0.55
FAM3A-220ENST00000497506 IFNA7P01567 189 aa11.64□□□□□ -0.55
FAM3A-220ENST00000497506 IGLV2-11P01706 119 aa11.64□□□□□ -0.55
FAM3A-220ENST00000497506 AZU1P20160 251 aa11.64□□□□□ -0.55
FAM3A-220ENST00000497506 RNASE4P34096 147 aaKnown RBP11.64□□□□□ -0.55
FAM3A-220ENST00000497506 TAS2R60P59551 318 aa11.64□□□□□ -0.55
FAM3A-220ENST00000497506 ALKAL2Q6UX46 152 aa11.64□□□□□ -0.55
FAM3A-220ENST00000497506 CYB561D1Q8N8Q1 229 aa11.64□□□□□ -0.55
FAM3A-220ENST00000497506 TVP23CQ96ET8 276 aa11.64□□□□□ -0.55
FAM3A-220ENST00000497506 ATG101Q9BSB4 218 aa11.64□□□□□ -0.55
FAM3A-220ENST00000497506 TMEM189A5PLL7 270 aa11.63□□□□□ -0.55
FAM3A-220ENST00000497506 C3orf84H3BNL1 204 aa11.63□□□□□ -0.55
FAM3A-220ENST00000497506 ATP5G3P48201 142 aa11.63□□□□□ -0.55
FAM3A-220ENST00000497506 CST9LP1Q5W188 147 aa11.63□□□□□ -0.55
FAM3A-220ENST00000497506 Q6ZQT7 251 aa11.63□□□□□ -0.55
FAM3A-220ENST00000497506 SGK494Q96LW2 274 aa11.63□□□□□ -0.55
FAM3A-220ENST00000497506 NIPSNAP3BQ9BS92 247 aa11.63□□□□□ -0.55
FAM3A-220ENST00000497506 CSMD3Q7Z407 3707 aa11.62□□□□□ -0.55
FAM3A-220ENST00000497506 K7EQM0 130 aa11.62□□□□□ -0.55
FAM3A-220ENST00000497506 PEX7O00628 323 aa11.62□□□□□ -0.55
FAM3A-220ENST00000497506 PPT1P50897 306 aa11.62□□□□□ -0.55
FAM3A-220ENST00000497506 TMEM75Q8N9X5 138 aa11.62□□□□□ -0.55
FAM3A-220ENST00000497506 C11orf45Q8TAV5 145 aa11.62□□□□□ -0.55
FAM3A-220ENST00000497506 HIST1H2BAQ96A08 127 aa11.62□□□□□ -0.55
FAM3A-220ENST00000497506 LINC00479Q96M42 142 aa11.62□□□□□ -0.55
FAM3A-220ENST00000497506 CELA1Q9UNI1 258 aa11.62□□□□□ -0.55
FAM3A-220ENST00000497506 PSG8Q9UQ74 426 aa11.62□□□□□ -0.55
FAM3A-220ENST00000497506 HTN1P15515 57 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms