RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 STAG3L2P0CL84 134 aa8.25□□□□□ -1.09
HLA-B-254ENST00000497377 STAG3L3P0CL85 134 aa8.25□□□□□ -1.09
HLA-B-254ENST00000497377 RANP62826 216 aaKnown RBP8.25□□□□□ -1.09
HLA-B-254ENST00000497377 PMS2P11Q13670 270 aa8.25□□□□□ -1.09
HLA-B-254ENST00000497377 CEMP1Q6PRD7 247 aaPredicted RBP8.25□□□□□ -1.09
HLA-B-254ENST00000497377 Q6ZNX1 250 aa8.25□□□□□ -1.09
HLA-B-254ENST00000497377 C9orf47Q6ZRZ4 202 aa8.25□□□□□ -1.09
HLA-B-254ENST00000497377 ARL6IP6Q8N6S5 226 aa8.25□□□□□ -1.09
HLA-B-254ENST00000497377 RXFP4Q8TDU9 374 aa8.25□□□□□ -1.09
HLA-B-254ENST00000497377 PHLDA1Q8WV24 401 aaPredicted RBP8.25□□□□□ -1.09
HLA-B-254ENST00000497377 RAB24Q969Q5 203 aa8.25□□□□□ -1.09
HLA-B-254ENST00000497377 ARPC5LQ9BPX5 153 aa8.25□□□□□ -1.09
HLA-B-254ENST00000497377 ACTR3CQ9C0K3 210 aaPredicted RBP8.25□□□□□ -1.09
HLA-B-254ENST00000497377 Q9H3A6 140 aa8.25□□□□□ -1.09
HLA-B-254ENST00000497377 TRAV12-2A0A075B6T6 113 aa8.24□□□□□ -1.09
HLA-B-254ENST00000497377 LOC102723971A0A1B0GUV8 181 aa8.24□□□□□ -1.09
HLA-B-254ENST00000497377 RBAKDNA6NC62 111 aa8.24□□□□□ -1.09
HLA-B-254ENST00000497377 C11orf94C9JXX5 98 aa8.24□□□□□ -1.09
HLA-B-254ENST00000497377 SLC25A5P05141 298 aaKnown RBP8.24□□□□□ -1.09
HLA-B-254ENST00000497377 NMBP08949 121 aa8.24□□□□□ -1.09
HLA-B-254ENST00000497377 ARL14EPLP0DKL9 152 aa8.24□□□□□ -1.09
HLA-B-254ENST00000497377 CT45A10P0DMU9 189 aa8.24□□□□□ -1.09
HLA-B-254ENST00000497377 TAS2R60P59551 318 aa8.24□□□□□ -1.09
HLA-B-254ENST00000497377 NANOS2P60321 138 aaKnown RBP8.24□□□□□ -1.09
HLA-B-254ENST00000497377 AKR1C8PQ5T2L2 129 aa8.24□□□□□ -1.09
HLA-B-254ENST00000497377 TMEM78Q5T7P6 136 aa8.24□□□□□ -1.09
HLA-B-254ENST00000497377 OTORQ9NRC9 128 aa8.24□□□□□ -1.09
HLA-B-254ENST00000497377 CYTL1Q9NRR1 136 aa8.24□□□□□ -1.09
HLA-B-254ENST00000497377 CSMD3Q7Z407 3707 aa8.23□□□□□ -1.09
HLA-B-254ENST00000497377 TRBV7-9A0A0J9YWB2 115 aa8.23□□□□□ -1.09
HLA-B-254ENST00000497377 KANTRA0A1W2PQU2 76 aa8.23□□□□□ -1.09
HLA-B-254ENST00000497377 H7BYZ3 331 aa8.23□□□□□ -1.09
HLA-B-254ENST00000497377 CXorf1O96002 111 aa8.23□□□□□ -1.09
HLA-B-254ENST00000497377 SPART-AS1P0CW21 52 aa8.23□□□□□ -1.09
HLA-B-254ENST00000497377 EIF5AP63241 154 aaKnown RBP8.23□□□□□ -1.09
HLA-B-254ENST00000497377 TCTE3Q8IZS6 198 aa8.23□□□□□ -1.09
HLA-B-254ENST00000497377 OR11H4Q8NGC9 324 aa8.23□□□□□ -1.09
HLA-B-254ENST00000497377 CMTM2Q8TAZ6 248 aa8.23□□□□□ -1.09
HLA-B-254ENST00000497377 SUN5Q8TC36 379 aa8.23□□□□□ -1.09
HLA-B-254ENST00000497377 LINC01587Q99440 93 aa8.23□□□□□ -1.09
HLA-B-254ENST00000497377 TMEM167BQ9NRX6 74 aa8.23□□□□□ -1.09
HLA-B-254ENST00000497377 IGKV2-40A0A087WW87 121 aaPredicted RBP8.22□□□□□ -1.09
HLA-B-254ENST00000497377 PGPA6NDG6 321 aa8.22□□□□□ -1.09
HLA-B-254ENST00000497377 HMGB3O15347 200 aaKnown RBP8.22□□□□□ -1.09
HLA-B-254ENST00000497377 BCL2L11O43521 198 aa8.22□□□□□ -1.09
HLA-B-254ENST00000497377 IGKV2D-40P01614 121 aaPredicted RBP8.22□□□□□ -1.09
HLA-B-254ENST00000497377 PRB4P10163 310 aaPredicted RBP8.22□□□□□ -1.09
HLA-B-254ENST00000497377 CRISP2P16562 243 aa8.22□□□□□ -1.09
HLA-B-254ENST00000497377 GCHFRP30047 84 aa8.22□□□□□ -1.09
HLA-B-254ENST00000497377 ERCC8Q13216 396 aa8.22□□□□□ -1.09
HLA-B-254ENST00000497377 GFI1BQ5VTD9 330 aa8.22□□□□□ -1.09
HLA-B-254ENST00000497377 ZNF493Q6ZR52 646 aa8.22□□□□□ -1.09
HLA-B-254ENST00000497377 ST6GAL2Q96JF0 529 aa8.22□□□□□ -1.09
HLA-B-254ENST00000497377 FAM19A4Q96LR4 140 aa8.22□□□□□ -1.09
HLA-B-254ENST00000497377 AGPAT4-IT1Q9H0P7 198 aa8.22□□□□□ -1.09
HLA-B-254ENST00000497377 LENEPQ9Y5L5 61 aa8.22□□□□□ -1.09
HLA-B-254ENST00000497377 TRAV10A0A0B4J240 114 aa8.21□□□□□ -1.1
HLA-B-254ENST00000497377 CTXND1A0A1B0GTU2 59 aa8.21□□□□□ -1.1
HLA-B-254ENST00000497377 SERTM2A0A1B0GWG4 89 aa8.21□□□□□ -1.1
HLA-B-254ENST00000497377 ZNF705GA8MUZ8 300 aaPredicted RBP8.21□□□□□ -1.1
HLA-B-254ENST00000497377 KLLNB2CW77 178 aa8.21□□□□□ -1.1
HLA-B-254ENST00000497377 DIRC3C9JPN6 131 aa8.21□□□□□ -1.1
HLA-B-254ENST00000497377 EIF3GO75821 320 aaKnown RBP eCLIP8.21□□□□□ -1.1
HLA-B-254ENST00000497377 SEC11BP0C7V7 166 aa8.21□□□□□ -1.1
HLA-B-254ENST00000497377 ZNF138P52744 262 aa8.21□□□□□ -1.1
HLA-B-254ENST00000497377 EMP1P54849 157 aa8.21□□□□□ -1.1
HLA-B-254ENST00000497377 TCTAP57738 103 aa8.21□□□□□ -1.1
HLA-B-254ENST00000497377 TMED6Q8WW62 240 aa8.21□□□□□ -1.1
HLA-B-254ENST00000497377 C16orf74Q96GX8 76 aa8.21□□□□□ -1.1
HLA-B-254ENST00000497377 PYGO2Q9BRQ0 406 aa8.21□□□□□ -1.1
HLA-B-254ENST00000497377 NIPSNAP3BQ9BS92 247 aa8.21□□□□□ -1.1
HLA-B-254ENST00000497377 ZNF492Q9P255 531 aa8.21□□□□□ -1.1
HLA-B-254ENST00000497377 DKK2Q9UBU2 259 aa8.21□□□□□ -1.1
HLA-B-254ENST00000497377 CELA1Q9UNI1 258 aa8.21□□□□□ -1.1
HLA-B-254ENST00000497377 YTHDF2Q9Y5A9 579 aaKnown RBP8.21□□□□□ -1.1
HLA-B-254ENST00000497377 LCE6AA0A183 80 aa8.2□□□□□ -1.1
HLA-B-254ENST00000497377 C7orf71A4D174 169 aa8.2□□□□□ -1.1
HLA-B-254ENST00000497377 LYRM9A8MSI8 78 aa8.2□□□□□ -1.1
HLA-B-254ENST00000497377 UMAD1C9J7I0 102 aa8.2□□□□□ -1.1
HLA-B-254ENST00000497377 PFDN1O60925 122 aa8.2□□□□□ -1.1
HLA-B-254ENST00000497377 C12orf74Q32Q52 190 aa8.2□□□□□ -1.1
HLA-B-254ENST00000497377 FAM222AQ5U5X8 452 aa8.2□□□□□ -1.1
HLA-B-254ENST00000497377 CCDC28AQ8IWP9 274 aa8.2□□□□□ -1.1
HLA-B-254ENST00000497377 C5orf17Q8NAS9 161 aa8.2□□□□□ -1.1
HLA-B-254ENST00000497377 C2CD4CQ8TF44 421 aa8.2□□□□□ -1.1
HLA-B-254ENST00000497377 TMEM263Q8WUH6 116 aaKnown RBP8.2□□□□□ -1.1
HLA-B-254ENST00000497377 HYLS1Q96M11 299 aa8.2□□□□□ -1.1
HLA-B-254ENST00000497377 VGLL1Q99990 258 aa8.2□□□□□ -1.1
HLA-B-254ENST00000497377 ZNF471Q9BX82 626 aaPredicted RBP8.2□□□□□ -1.1
HLA-B-254ENST00000497377 TRAV12-3A0A0B4J271 114 aa8.19□□□□□ -1.1
HLA-B-254ENST00000497377 KRTAP4-8A0A0G2JLE6 195 aa8.19□□□□□ -1.1
HLA-B-254ENST00000497377 C1QBP02746 253 aa8.19□□□□□ -1.1
HLA-B-254ENST00000497377 GPX1P07203 203 aa8.19□□□□□ -1.1
HLA-B-254ENST00000497377 KIR3DS1Q14943 382 aa8.19□□□□□ -1.1
HLA-B-254ENST00000497377 ZNF726P1Q15940 193 aa8.19□□□□□ -1.1
HLA-B-254ENST00000497377 Q6ZTC4 211 aa8.19□□□□□ -1.1
HLA-B-254ENST00000497377 TMUB2Q71RG4 321 aa8.19□□□□□ -1.1
HLA-B-254ENST00000497377 AKAP14Q86UN6 197 aa8.19□□□□□ -1.1
HLA-B-254ENST00000497377 ZFAND2AQ8N6M9 145 aa8.19□□□□□ -1.1
HLA-B-254ENST00000497377 LINC00467Q9BRT7 94 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms