RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 LINC01356Q8N9X3 169 aa10.01□□□□□ -0.81
GARNL3-220ENST00000496711 FER1L6-AS1Q8NA97 138 aa10.01□□□□□ -0.81
GARNL3-220ENST00000496711 GLMPQ8WWB7 406 aa10.01□□□□□ -0.81
GARNL3-220ENST00000496711 BBC3Q96PG8 261 aaPredicted RBP10.01□□□□□ -0.81
GARNL3-220ENST00000496711 MYO18BQ8IUG5 2567 aa10.01□□□□□ -0.81
GARNL3-220ENST00000496711 C2orf70A6NJV1 201 aa10□□□□□ -0.81
GARNL3-220ENST00000496711 FABP5P3A8MUU1 101 aa10□□□□□ -0.81
GARNL3-220ENST00000496711 TRBV12-3P01733 135 aa10□□□□□ -0.81
GARNL3-220ENST00000496711 IGLC6P0CF74 106 aa10□□□□□ -0.81
GARNL3-220ENST00000496711 PF4V1P10720 104 aa10□□□□□ -0.81
GARNL3-220ENST00000496711 BLCAPP62952 87 aa10□□□□□ -0.81
GARNL3-220ENST00000496711 CYB5R2Q6BCY4 276 aa10□□□□□ -0.81
GARNL3-220ENST00000496711 EBLN2Q6P2I7 272 aa10□□□□□ -0.81
GARNL3-220ENST00000496711 IL17RELQ6ZVW7 336 aa10□□□□□ -0.81
GARNL3-220ENST00000496711 CLEC5AQ9NY25 188 aa10□□□□□ -0.81
GARNL3-220ENST00000496711 SVEP1Q4LDE5 3571 aa10□□□□□ -0.81
GARNL3-220ENST00000496711 TMEM213A2RRL7 107 aa10□□□□□ -0.81
GARNL3-220ENST00000496711 PMCHL1Q16048 86 aa10□□□□□ -0.81
GARNL3-220ENST00000496711 TMEM78Q5T7P6 136 aa10□□□□□ -0.81
GARNL3-220ENST00000496711 C9orf139Q6ZV77 190 aa10□□□□□ -0.81
GARNL3-220ENST00000496711 MIEN1Q9BRT3 115 aa10□□□□□ -0.81
GARNL3-220ENST00000496711 A0A096LNT2 108 aa9.99□□□□□ -0.81
GARNL3-220ENST00000496711 IGLV1-40P01703 118 aa9.99□□□□□ -0.81
GARNL3-220ENST00000496711 ORM1P02763 201 aa9.99□□□□□ -0.81
GARNL3-220ENST00000496711 LINC01559Q495D7 138 aa9.99□□□□□ -0.81
GARNL3-220ENST00000496711 SPATA45Q537H7 98 aa9.99□□□□□ -0.81
GARNL3-220ENST00000496711 UNQ9165/PRO28630Q6UXU0 137 aa9.99□□□□□ -0.81
GARNL3-220ENST00000496711 C2orf88Q9BSF0 95 aa9.99□□□□□ -0.81
GARNL3-220ENST00000496711 AGPAT4-IT1Q9H0P7 198 aa9.99□□□□□ -0.81
GARNL3-220ENST00000496711 ANKRD17O75179 2603 aaKnown RBP9.99□□□□□ -0.81
GARNL3-220ENST00000496711 J3QLI3 93 aa9.98□□□□□ -0.81
GARNL3-220ENST00000496711 EREGO14944 169 aa9.98□□□□□ -0.81
GARNL3-220ENST00000496711 IGHV3-11P01762 117 aa9.98□□□□□ -0.81
GARNL3-220ENST00000496711 ZNF138P52744 262 aa9.98□□□□□ -0.81
GARNL3-220ENST00000496711 Q6ZS46 218 aa9.98□□□□□ -0.81
GARNL3-220ENST00000496711 C16orf92Q96LL3 132 aa9.98□□□□□ -0.81
GARNL3-220ENST00000496711 KLK15Q9H2R5 256 aa9.98□□□□□ -0.81
GARNL3-220ENST00000496711 ZNF580Q9UK33 172 aa9.98□□□□□ -0.81
GARNL3-220ENST00000496711 A0A0G2JLM5 398 aa9.98□□□□□ -0.81
GARNL3-220ENST00000496711 LEPROTL1O95214 131 aa9.98□□□□□ -0.81
GARNL3-220ENST00000496711 CSN3P07498 182 aa9.98□□□□□ -0.81
GARNL3-220ENST00000496711 CFHR3Q02985 330 aa9.98□□□□□ -0.81
GARNL3-220ENST00000496711 FAM104BQ5XKR9 115 aa9.98□□□□□ -0.81
GARNL3-220ENST00000496711 ZNF705AQ6ZN79 300 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-220ENST00000496711 C9orf47Q6ZRZ4 202 aa9.98□□□□□ -0.81
GARNL3-220ENST00000496711 ZNF843Q8N446 348 aa9.98□□□□□ -0.81
GARNL3-220ENST00000496711 OR4X2Q8NGF9 303 aa9.98□□□□□ -0.81
GARNL3-220ENST00000496711 TMEM70Q9BUB7 260 aa9.98□□□□□ -0.81
GARNL3-220ENST00000496711 D6R8Y8 96 aa9.97□□□□□ -0.81
GARNL3-220ENST00000496711 SMAD7O15105 426 aaKnown RBP9.97□□□□□ -0.81
GARNL3-220ENST00000496711 OR5AL1P0C617 328 aa9.97□□□□□ -0.81
GARNL3-220ENST00000496711 SSTP61278 116 aa9.97□□□□□ -0.81
GARNL3-220ENST00000496711 HIST1H1AQ02539 215 aaPredicted RBP9.97□□□□□ -0.81
GARNL3-220ENST00000496711 TWIST1Q15672 202 aa9.97□□□□□ -0.81
GARNL3-220ENST00000496711 MRPL52Q86TS9 123 aaKnown RBP9.97□□□□□ -0.81
GARNL3-220ENST00000496711 AMN1Q8IY45 258 aa9.97□□□□□ -0.81
GARNL3-220ENST00000496711 PSMG3-AS1Q96PY0 264 aa9.97□□□□□ -0.81
GARNL3-220ENST00000496711 CNFNQ9BYD5 112 aa9.97□□□□□ -0.81
GARNL3-220ENST00000496711 NPFFR1Q9GZQ6 430 aa9.97□□□□□ -0.81
GARNL3-220ENST00000496711 U3KQK5 164 aa9.97□□□□□ -0.81
GARNL3-220ENST00000496711 CR1P17927 2039 aa9.96□□□□□ -0.81
GARNL3-220ENST00000496711 MUC21A0A0G2JKD1 596 aa9.96□□□□□ -0.81
GARNL3-220ENST00000496711 MUC21A0A140T8X8 626 aa9.96□□□□□ -0.81
GARNL3-220ENST00000496711 A1L4Q6 167 aa9.96□□□□□ -0.81
GARNL3-220ENST00000496711 SRSF1Q07955 248 aaKnown RBP eCLIP9.96□□□□□ -0.81
GARNL3-220ENST00000496711 DEFB112Q30KQ8 113 aa9.96□□□□□ -0.81
GARNL3-220ENST00000496711 MUC21Q5SSG8 566 aa9.96□□□□□ -0.81
GARNL3-220ENST00000496711 ZNF575Q86XF7 245 aa9.96□□□□□ -0.81
GARNL3-220ENST00000496711 ORMDL3Q8N138 153 aa9.96□□□□□ -0.81
GARNL3-220ENST00000496711 SNHG12Q9BXW3 62 aa9.96□□□□□ -0.81
GARNL3-220ENST00000496711 AP5S1Q9NUS5 200 aa9.96□□□□□ -0.81
GARNL3-220ENST00000496711 PPP1R14DQ9NXH3 145 aa9.96□□□□□ -0.81
GARNL3-220ENST00000496711 M0R143 59 aa9.96□□□□□ -0.82
GARNL3-220ENST00000496711 CRXO43186 299 aaPredicted RBP9.96□□□□□ -0.82
GARNL3-220ENST00000496711 LCNL1Q6ZST4 164 aa9.96□□□□□ -0.82
GARNL3-220ENST00000496711 FA2HQ7L5A8 372 aa9.96□□□□□ -0.82
GARNL3-220ENST00000496711 ATOH7Q8N100 152 aa9.96□□□□□ -0.82
GARNL3-220ENST00000496711 ZNF738Q8NE65 137 aa9.96□□□□□ -0.82
GARNL3-220ENST00000496711 PRELID3AQ96N28 172 aa9.96□□□□□ -0.82
GARNL3-220ENST00000496711 ZNF462Q96JM2 2506 aa9.95□□□□□ -0.82
GARNL3-220ENST00000496711 A0A1B0GV90 55 aa9.95□□□□□ -0.82
GARNL3-220ENST00000496711 SYS1-DBNDD2H3BUS1 97 aa9.95□□□□□ -0.82
GARNL3-220ENST00000496711 IGHV4-59P01825 116 aa9.95□□□□□ -0.82
GARNL3-220ENST00000496711 MRPL51Q4U2R6 128 aaKnown RBP9.95□□□□□ -0.82
GARNL3-220ENST00000496711 SPATA12Q7Z6I5 190 aa9.95□□□□□ -0.82
GARNL3-220ENST00000496711 GPHB5Q86YW7 130 aa9.95□□□□□ -0.82
GARNL3-220ENST00000496711 KLHDC1Q8N7A1 406 aa9.95□□□□□ -0.82
GARNL3-220ENST00000496711 PRSS3P2Q8NHM4 247 aa9.95□□□□□ -0.82
GARNL3-220ENST00000496711 C20orf173Q96LM9 149 aa9.95□□□□□ -0.82
GARNL3-220ENST00000496711 UTP20O75691 2785 aaKnown RBP9.95□□□□□ -0.82
GARNL3-220ENST00000496711 CELSR1Q9NYQ6 3014 aa9.95□□□□□ -0.82
GARNL3-220ENST00000496711 VPS13CQ709C8 3753 aa9.94□□□□□ -0.82
GARNL3-220ENST00000496711 C20orf202A1L168 122 aa9.94□□□□□ -0.82
GARNL3-220ENST00000496711 SOCS3O14543 225 aa9.94□□□□□ -0.82
GARNL3-220ENST00000496711 TGFAP01135 160 aa9.94□□□□□ -0.82
GARNL3-220ENST00000496711 LOXL1Q08397 574 aaPredicted RBP9.94□□□□□ -0.82
GARNL3-220ENST00000496711 TMEM95Q3KNT9 176 aa9.94□□□□□ -0.82
GARNL3-220ENST00000496711 LINC00173Q6ZV60 143 aa9.94□□□□□ -0.82
GARNL3-220ENST00000496711 TMEM191AQ9H0A3 160 aa9.94□□□□□ -0.82
GARNL3-220ENST00000496711 HSPB8Q9UJY1 196 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms