RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 HIF1ANQ9NWT6 349 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 LINC00527Q9UJ94 153 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 U3KQE9 123 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 CACNA1BQ00975 2339 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 IGHV3OR16-13A0A075B7E8 117 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 IGHV3-74A0A0B4J1X5 117 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 TMEM213A2RRL7 107 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 ZNF138P52744 262 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 ERCC8Q13216 396 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 C8orf86Q6ZUL3 223 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 ORMDL3Q8N138 153 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 PRAC2D3DTV9 90 aa8.52□□□□□ -1.05
CMSS1-208ENST00000496116 D6R8Y8 96 aa8.52□□□□□ -1.05
CMSS1-208ENST00000496116 H3BUX3 64 aa8.52□□□□□ -1.05
CMSS1-208ENST00000496116 TCAPO15273 167 aa8.52□□□□□ -1.05
CMSS1-208ENST00000496116 ZNF207O43670 478 aaKnown RBP8.52□□□□□ -1.05
CMSS1-208ENST00000496116 BRI3O95415 125 aa8.52□□□□□ -1.05
CMSS1-208ENST00000496116 IGHG2P01859 326 aa8.52□□□□□ -1.05
CMSS1-208ENST00000496116 IGLC6P0CF74 106 aa8.52□□□□□ -1.05
CMSS1-208ENST00000496116 HNRNPA3P51991 378 aaKnown RBP8.52□□□□□ -1.05
CMSS1-208ENST00000496116 TWIST1Q15672 202 aa8.52□□□□□ -1.05
CMSS1-208ENST00000496116 LY6EQ16553 131 aa8.52□□□□□ -1.05
CMSS1-208ENST00000496116 TMEM78Q5T7P6 136 aa8.52□□□□□ -1.05
CMSS1-208ENST00000496116 Q6ZN92 141 aa8.52□□□□□ -1.05
CMSS1-208ENST00000496116 AMN1Q8IY45 258 aa8.52□□□□□ -1.05
CMSS1-208ENST00000496116 USMG5Q96IX5 58 aa8.52□□□□□ -1.05
CMSS1-208ENST00000496116 TMEM191AQ9H0A3 160 aa8.52□□□□□ -1.05
CMSS1-208ENST00000496116 IGHV3-49A0A0A0MS15 119 aa8.51□□□□□ -1.05
CMSS1-208ENST00000496116 OR4C46A6NHA9 309 aa8.51□□□□□ -1.05
CMSS1-208ENST00000496116 RPLP1P05386 114 aaKnown RBP8.51□□□□□ -1.05
CMSS1-208ENST00000496116 DSCR9P59020 149 aa8.51□□□□□ -1.05
CMSS1-208ENST00000496116 LINC01559Q495D7 138 aa8.51□□□□□ -1.05
CMSS1-208ENST00000496116 PET117Q6UWS5 81 aa8.51□□□□□ -1.05
CMSS1-208ENST00000496116 OR10AG1Q8NH19 301 aa8.51□□□□□ -1.05
CMSS1-208ENST00000496116 PRELID3AQ96N28 172 aa8.51□□□□□ -1.05
CMSS1-208ENST00000496116 U3KQK5 164 aa8.51□□□□□ -1.05
CMSS1-208ENST00000496116 B4DSR2 109 aa8.51□□□□□ -1.05
CMSS1-208ENST00000496116 NDUFA4O00483 81 aa8.51□□□□□ -1.05
CMSS1-208ENST00000496116 IL17RELQ6ZVW7 336 aa8.51□□□□□ -1.05
CMSS1-208ENST00000496116 TRAV8-2A0A0B4J237 113 aa8.5□□□□□ -1.05
CMSS1-208ENST00000496116 A6NDX4 124 aa8.5□□□□□ -1.05
CMSS1-208ENST00000496116 GATA3P23771 443 aa8.5□□□□□ -1.05
CMSS1-208ENST00000496116 HIST1H1AQ02539 215 aaPredicted RBP8.5□□□□□ -1.05
CMSS1-208ENST00000496116 MAJINQ3KP22 176 aa8.5□□□□□ -1.05
CMSS1-208ENST00000496116 C9orf139Q6ZV77 190 aa8.5□□□□□ -1.05
CMSS1-208ENST00000496116 C16orf92Q96LL3 132 aa8.5□□□□□ -1.05
CMSS1-208ENST00000496116 CNFNQ9BYD5 112 aa8.5□□□□□ -1.05
CMSS1-208ENST00000496116 AGPAT4-IT1Q9H0P7 198 aa8.5□□□□□ -1.05
CMSS1-208ENST00000496116 CACNA1AO00555 2505 aa8.5□□□□□ -1.05
CMSS1-208ENST00000496116 HSBP1L1C9JCN9 74 aa8.5□□□□□ -1.05
CMSS1-208ENST00000496116 IGLL1P15814 213 aa8.5□□□□□ -1.05
CMSS1-208ENST00000496116 PPIFP30405 207 aaKnown RBP8.5□□□□□ -1.05
CMSS1-208ENST00000496116 CKS2P33552 79 aa8.5□□□□□ -1.05
CMSS1-208ENST00000496116 IFI27P40305 119 aaPredicted RBP8.5□□□□□ -1.05
CMSS1-208ENST00000496116 BATFQ16520 125 aa8.5□□□□□ -1.05
CMSS1-208ENST00000496116 MRPL51Q4U2R6 128 aaKnown RBP8.5□□□□□ -1.05
CMSS1-208ENST00000496116 LINC00173Q6ZV60 143 aa8.5□□□□□ -1.05
CMSS1-208ENST00000496116 SPATA12Q7Z6I5 190 aa8.5□□□□□ -1.05
CMSS1-208ENST00000496116 GLMPQ8WWB7 406 aa8.5□□□□□ -1.05
CMSS1-208ENST00000496116 MUC21A0A0G2JKD1 596 aa8.49□□□□□ -1.05
CMSS1-208ENST00000496116 MUC21A0A140T8X8 626 aa8.49□□□□□ -1.05
CMSS1-208ENST00000496116 MUC21Q5SSG8 566 aa8.49□□□□□ -1.05
CMSS1-208ENST00000496116 C9orf47Q6ZRZ4 202 aa8.49□□□□□ -1.05
CMSS1-208ENST00000496116 PPP1R14DQ9NXH3 145 aa8.49□□□□□ -1.05
CMSS1-208ENST00000496116 SIGLEC8Q9NYZ4 499 aa8.49□□□□□ -1.05
CMSS1-208ENST00000496116 TIMM8BQ9Y5J9 83 aaPredicted RBP8.49□□□□□ -1.05
CMSS1-208ENST00000496116 SPTAN1Q13813 2472 aaKnown RBP8.49□□□□□ -1.05
CMSS1-208ENST00000496116 A0A0G2JLM5 398 aa8.48□□□□□ -1.05
CMSS1-208ENST00000496116 LOC389332A0A1B0GUA5 103 aa8.48□□□□□ -1.05
CMSS1-208ENST00000496116 PPBPP02775 128 aa8.48□□□□□ -1.05
CMSS1-208ENST00000496116 ST20Q9HBF5 79 aa8.48□□□□□ -1.05
CMSS1-208ENST00000496116 PF4V1P10720 104 aa8.48□□□□□ -1.05
CMSS1-208ENST00000496116 SLC25A16P16260 332 aa8.48□□□□□ -1.05
CMSS1-208ENST00000496116 TSPOP30536 169 aa8.48□□□□□ -1.05
CMSS1-208ENST00000496116 COL5A1-AS1Q5SY13 56 aa8.48□□□□□ -1.05
CMSS1-208ENST00000496116 ZNF575Q86XF7 245 aa8.48□□□□□ -1.05
CMSS1-208ENST00000496116 MRPS16Q9Y3D3 137 aaKnown RBP8.48□□□□□ -1.05
CMSS1-208ENST00000496116 LENEPQ9Y5L5 61 aa8.48□□□□□ -1.05
CMSS1-208ENST00000496116 H0Y8G0 127 aa8.47□□□□□ -1.05
CMSS1-208ENST00000496116 UNQ9165/PRO28630Q6UXU0 137 aa8.47□□□□□ -1.05
CMSS1-208ENST00000496116 ZNF747Q9BV97 191 aa8.47□□□□□ -1.05
CMSS1-208ENST00000496116 LAMTOR2Q9Y2Q5 125 aa8.47□□□□□ -1.05
CMSS1-208ENST00000496116 IGKV3D-20A0A0C4DH25 116 aa8.47□□□□□ -1.05
CMSS1-208ENST00000496116 TRBV12-3P01733 135 aa8.47□□□□□ -1.05
CMSS1-208ENST00000496116 BLCAPP62952 87 aa8.47□□□□□ -1.05
CMSS1-208ENST00000496116 DOPEY1Q5JWR5 2465 aa8.47□□□□□ -1.05
CMSS1-208ENST00000496116 LINC01545Q5VT33 79 aa8.47□□□□□ -1.05
CMSS1-208ENST00000496116 ZNF738Q8NE65 137 aa8.47□□□□□ -1.05
CMSS1-208ENST00000496116 OR4X2Q8NGF9 303 aa8.47□□□□□ -1.05
CMSS1-208ENST00000496116 NPFFR1Q9GZQ6 430 aa8.47□□□□□ -1.05
CMSS1-208ENST00000496116 ZFHX3Q15911 3703 aa8.46□□□□□ -1.05
CMSS1-208ENST00000496116 VPS13CQ709C8 3753 aa8.46□□□□□ -1.06
CMSS1-208ENST00000496116 TCF21O43680 179 aa8.46□□□□□ -1.06
CMSS1-208ENST00000496116 IGHV3-11P01762 117 aa8.46□□□□□ -1.06
CMSS1-208ENST00000496116 SMIM15Q7Z3B0 74 aa8.46□□□□□ -1.06
CMSS1-208ENST00000496116 SMAD7O15105 426 aaKnown RBP8.45□□□□□ -1.06
CMSS1-208ENST00000496116 NPYP01303 97 aa8.45□□□□□ -1.06
CMSS1-208ENST00000496116 IGLV1-40P01703 118 aa8.45□□□□□ -1.06
CMSS1-208ENST00000496116 HBDP02042 147 aa8.45□□□□□ -1.06
CMSS1-208ENST00000496116 LINC01356Q8N9X3 169 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms