RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 CST11Q9H112 138 aa1.37□□□□□ -2.19
SSR3-208ENST00000496050 ERBINQ96RT1 1412 aa1.37□□□□□ -2.19
SSR3-208ENST00000496050 ANKRD31Q8N7Z5 1873 aa1.37□□□□□ -2.19
SSR3-208ENST00000496050 CHD3Q12873 2000 aaKnown RBP1.37□□□□□ -2.19
SSR3-208ENST00000496050 TCOF1Q13428 1488 aaKnown RBP1.37□□□□□ -2.19
SSR3-208ENST00000496050 PHRF1Q9P1Y6 1649 aaKnown RBP1.37□□□□□ -2.19
SSR3-208ENST00000496050 BORCS7-ASMTA0A0B4J1R7 106 aa1.36□□□□□ -2.19
SSR3-208ENST00000496050 EFCAB10A6NFE3 127 aa1.36□□□□□ -2.19
SSR3-208ENST00000496050 C5orf58C9J3I9 102 aa1.36□□□□□ -2.19
SSR3-208ENST00000496050 BCL9O00512 1426 aa1.36□□□□□ -2.19
SSR3-208ENST00000496050 DEGS1O15121 323 aa1.36□□□□□ -2.19
SSR3-208ENST00000496050 RPL7P18124 248 aaKnown RBP1.36□□□□□ -2.19
SSR3-208ENST00000496050 RPS3P23396 243 aaKnown RBP eCLIP1.36□□□□□ -2.196e-11■■□□□ 12.7
SSR3-208ENST00000496050 POLR2HP52434 150 aaKnown RBP1.36□□□□□ -2.19
SSR3-208ENST00000496050 EFNA4P52798 201 aa1.36□□□□□ -2.19
SSR3-208ENST00000496050 DIRC1Q969H9 104 aa1.36□□□□□ -2.19
SSR3-208ENST00000496050 TCEAL4Q96EI5 215 aa1.36□□□□□ -2.19
SSR3-208ENST00000496050 FREM3P0C091 2139 aa1.35□□□□□ -2.19
SSR3-208ENST00000496050 SRP9P49458 86 aaKnown RBP1.35□□□□□ -2.19
SSR3-208ENST00000496050 PSPHP78330 225 aa1.35□□□□□ -2.19
SSR3-208ENST00000496050 DIAPH2-AS1Q14236 149 aa1.35□□□□□ -2.19
SSR3-208ENST00000496050 FOXI2Q6ZQN5 318 aa1.35□□□□□ -2.19
SSR3-208ENST00000496050 PRELID3AQ96N28 172 aa1.35□□□□□ -2.19
SSR3-208ENST00000496050 WFDC10AQ9H1F0 79 aa1.35□□□□□ -2.19
SSR3-208ENST00000496050 GSKIPQ9P0R6 139 aa1.35□□□□□ -2.19
SSR3-208ENST00000496050 MED31Q9Y3C7 131 aa1.35□□□□□ -2.19
SSR3-208ENST00000496050 UNC13CQ8NB66 2214 aa1.35□□□□□ -2.19
SSR3-208ENST00000496050 MYO18AQ92614 2054 aaKnown RBP1.35□□□□□ -2.19
SSR3-208ENST00000496050 CASP8AP2Q9UKL3 1982 aa1.34□□□□□ -2.19
SSR3-208ENST00000496050 TRAV36DV7A0A075B6V5 113 aa1.34□□□□□ -2.19
SSR3-208ENST00000496050 DBIP07108 87 aaKnown RBP1.34□□□□□ -2.19
SSR3-208ENST00000496050 SCTP09683 121 aa1.34□□□□□ -2.19
SSR3-208ENST00000496050 SPCS2Q15005 226 aa1.34□□□□□ -2.19
SSR3-208ENST00000496050 SPATA45Q537H7 98 aa1.34□□□□□ -2.19
SSR3-208ENST00000496050 LINC00575Q6W349 94 aa1.34□□□□□ -2.19
SSR3-208ENST00000496050 LINC00299Q6ZSB3 139 aa1.34□□□□□ -2.19
SSR3-208ENST00000496050 TMEM229BQ8NBD8 167 aa1.34□□□□□ -2.19
SSR3-208ENST00000496050 OR5AK2Q8NH90 309 aa1.34□□□□□ -2.19
SSR3-208ENST00000496050 CCL4L1Q8NHW4 92 aa1.34□□□□□ -2.19
SSR3-208ENST00000496050 TAF9BQ9HBM6 251 aa1.34□□□□□ -2.19
SSR3-208ENST00000496050 PTPRFP10586 1907 aa1.33□□□□□ -2.2
SSR3-208ENST00000496050 J3KT08 172 aa1.33□□□□□ -2.2
SSR3-208ENST00000496050 NDUFA2O43678 99 aa1.33□□□□□ -2.2
SSR3-208ENST00000496050 IGLV3-1P01715 115 aa1.33□□□□□ -2.2
SSR3-208ENST00000496050 PRB3Q04118 309 aaPredicted RBP1.33□□□□□ -2.2
SSR3-208ENST00000496050 MIR22HGQ0VDD5 57 aa1.33□□□□□ -2.2
SSR3-208ENST00000496050 OR8B8Q15620 311 aa1.33□□□□□ -2.2
SSR3-208ENST00000496050 SMIM21Q3B7S5 101 aa1.33□□□□□ -2.2
SSR3-208ENST00000496050 CCDC153Q494R4 210 aa1.33□□□□□ -2.2
SSR3-208ENST00000496050 CCDC58Q4VC31 144 aa1.33□□□□□ -2.2
SSR3-208ENST00000496050 MORN2Q502X0 79 aa1.33□□□□□ -2.2
SSR3-208ENST00000496050 LZICQ8WZA0 190 aa1.33□□□□□ -2.2
SSR3-208ENST00000496050 PAIP2BQ9ULR5 123 aaKnown RBP1.33□□□□□ -2.2
SSR3-208ENST00000496050 DLC1Q96QB1 1528 aa1.33□□□□□ -2.2
SSR3-208ENST00000496050 CNTRLQ7Z7A1 2325 aa1.33□□□□□ -2.2
SSR3-208ENST00000496050 NUP210Q8TEM1 1887 aaPredicted RBP1.33□□□□□ -2.2
SSR3-208ENST00000496050 NCOA3Q9Y6Q9 1424 aa1.32□□□□□ -2.2
SSR3-208ENST00000496050 CEP152O94986 1710 aa1.32□□□□□ -2.2
SSR3-208ENST00000496050 LAMA4Q16363 1823 aa1.32□□□□□ -2.2
SSR3-208ENST00000496050 TRAV23DV6A0A075B6W5 121 aa1.32□□□□□ -2.2
SSR3-208ENST00000496050 A0A1W2PPM0 123 aa1.32□□□□□ -2.2
SSR3-208ENST00000496050 TMEM189A5PLL7 270 aa1.32□□□□□ -2.2
SSR3-208ENST00000496050 TRACP01848 142 aa1.32□□□□□ -2.2
SSR3-208ENST00000496050 MPC1LP0DKB6 136 aa1.32□□□□□ -2.2
SSR3-208ENST00000496050 CKS1BP61024 79 aa1.32□□□□□ -2.2
SSR3-208ENST00000496050 MAXP61244 160 aa1.32□□□□□ -2.2
SSR3-208ENST00000496050 HRCT1Q6UXD1 115 aa1.32□□□□□ -2.2
SSR3-208ENST00000496050 CASC2Q6XLA1 102 aa1.32□□□□□ -2.2
SSR3-208ENST00000496050 LINC00305Q7Z4B0 112 aa1.32□□□□□ -2.2
SSR3-208ENST00000496050 LINC00269Q8N2A0 174 aa1.32□□□□□ -2.2
SSR3-208ENST00000496050 Q8N6K4 173 aa1.32□□□□□ -2.2
SSR3-208ENST00000496050 LXNQ9BS40 222 aa1.32□□□□□ -2.2
SSR3-208ENST00000496050 TPT1P8Q9HAU6 139 aa1.32□□□□□ -2.2
SSR3-208ENST00000496050 MED23Q9ULK4 1368 aa1.32□□□□□ -2.2
SSR3-208ENST00000496050 ZFC3H1O60293 1989 aaKnown RBP1.31□□□□□ -2.2
SSR3-208ENST00000496050 TRBV7-6A0A0J9YX20 115 aa1.31□□□□□ -2.2
SSR3-208ENST00000496050 TNFSF15O95150 251 aa1.31□□□□□ -2.2
SSR3-208ENST00000496050 IGHV3-33P01772 117 aa1.31□□□□□ -2.2
SSR3-208ENST00000496050 SAA1P0DJI8 122 aaPredicted RBP1.31□□□□□ -2.2
SSR3-208ENST00000496050 TPT1P13693 172 aaKnown RBP1.31□□□□□ -2.2
SSR3-208ENST00000496050 Q5XG85 94 aa1.31□□□□□ -2.2
SSR3-208ENST00000496050 OR8J3Q8NGG0 315 aa1.31□□□□□ -2.2
SSR3-208ENST00000496050 OR10AC1Q8NH08 325 aa1.31□□□□□ -2.2
SSR3-208ENST00000496050 CLEC2BQ92478 149 aa1.31□□□□□ -2.2
SSR3-208ENST00000496050 FAM107BQ9H098 131 aa1.31□□□□□ -2.2
SSR3-208ENST00000496050 TRAPPC2LQ9UL33 140 aa1.31□□□□□ -2.2
SSR3-208ENST00000496050 C9JAW5 83 aa1.3□□□□□ -2.2
SSR3-208ENST00000496050 K7EP13 123 aa1.3□□□□□ -2.2
SSR3-208ENST00000496050 SDC4P31431 198 aa1.3□□□□□ -2.2
SSR3-208ENST00000496050 ZCCHC23Q6ZST2 131 aa1.3□□□□□ -2.2
SSR3-208ENST00000496050 HIGD1AQ9Y241 93 aa1.3□□□□□ -2.2
SSR3-208ENST00000496050 SNRNP200O75643 2136 aaKnown RBP1.3□□□□□ -2.2
SSR3-208ENST00000496050 TRAV13-1A0A0B4J241 112 aa1.29□□□□□ -2.2
SSR3-208ENST00000496050 TRBV27A0A0K0K1C4 114 aa1.29□□□□□ -2.2
SSR3-208ENST00000496050 EVI2AP22794 236 aa1.29□□□□□ -2.2
SSR3-208ENST00000496050 OR8I2Q8N0Y5 310 aa1.29□□□□□ -2.2
SSR3-208ENST00000496050 TEX29Q8N6K0 151 aa1.29□□□□□ -2.2
SSR3-208ENST00000496050 COPZ2Q9P299 210 aa1.29□□□□□ -2.2
SSR3-208ENST00000496050 OVOS2A0A0G2JMS6 1433 aa1.29□□□□□ -2.2
SSR3-208ENST00000496050 SOGA1O94964 1423 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms