RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 ZNF705AQ6ZN79 300 aaPredicted RBP2.94□□□□□ -1.94
VPS52-222ENST00000495981 POM121L12Q8N7R1 296 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 ZNF709Q8N972 641 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 TMEM56Q96MV1 263 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 TCEAL7Q9BRU2 100 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 GINS3Q9BRX5 216 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 SAV1Q9H4B6 383 aaPredicted RBP2.94□□□□□ -1.94
VPS52-222ENST00000495981 DEFB131BA0A096LNP1 70 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 A0A1W2PPV4 95 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 C9orf170A2RU37 121 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 H7C423 109 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 SNAPC5O75971 98 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 OXTP01178 125 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 IFNA10P01566 189 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 PMP2P02689 132 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 CD5P06127 495 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 EIF4EP06730 217 aaKnown RBP2.93□□□□□ -1.94
VPS52-222ENST00000495981 IGLC1P0CG04 106 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 P0DMU3 169 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 FAM231AP0DMU4 169 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 FAM231CP0DMU5 169 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 HLA-DRB4P13762 266 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 CEBPGP53567 150 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 PSMG4Q5JS54 123 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 ACTL10Q5JWF8 245 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 TMEM69Q5SWH9 247 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 IDNKQ5T6J7 187 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 GDF5OSQ5U4N7 250 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 LHFPL1Q86WI0 220 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 OR5H2Q8NGV7 314 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 MITD1Q8WV92 249 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 GTSF1Q8WW33 167 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 VSIG2Q96IQ7 327 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 LINC00479Q96M42 142 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 TP53RKQ96S44 253 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 PARD6GQ9BYG4 376 aaPredicted RBP2.93□□□□□ -1.94
VPS52-222ENST00000495981 C20orf85Q9H1P6 137 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 RABAC1Q9UI14 185 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 HLA-DRB4X5D2U9 266 aa2.93□□□□□ -1.94
VPS52-222ENST00000495981 FSIP2Q5CZC0 6907 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 IGLV2-18A0A075B6J9 118 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 NDUFAF8A1L188 74 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 FAM231BA6NCW3 169 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 A8MTW9 85 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 KRTAP16-1A8MUX0 517 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 H3BMM0 161 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 CORTO00230 105 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 TCAPO15273 167 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 TNFAIP8O95379 198 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 STAG3L2P0CL84 134 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 G0S2P27469 103 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 FUSP35637 526 aaKnown RBP eCLIP2.92□□□□□ -1.94
VPS52-222ENST00000495981 CMC4P56277 68 aaPredicted RBP2.92□□□□□ -1.94
VPS52-222ENST00000495981 DEFB1P60022 68 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 HSPE1P61604 102 aaKnown RBP2.92□□□□□ -1.94
VPS52-222ENST00000495981 PAFAH1B2P68402 229 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 ASAH1Q13510 395 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 RNF212Q495C1 297 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 Q5VSD8 79 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 GPR107Q5VW38 600 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 SMIM15Q7Z3B0 74 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 KRTAP7-1Q8IUC3 87 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 CMTM1Q8IZ96 169 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 SLC35G3Q8N808 338 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 OR2D3Q8NGH3 330 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 OR4X1Q8NH49 305 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 METTL26Q96S19 204 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 BIN3Q9NQY0 253 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 FKBP11Q9NYL4 201 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 CCDC59Q9P031 241 aaKnown RBP2.92□□□□□ -1.94
VPS52-222ENST00000495981 RAB26Q9ULW5 256 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 SSR3Q9UNL2 185 aa2.92□□□□□ -1.94
VPS52-222ENST00000495981 PLAC8L1A1L4L8 177 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 TMEM238C9JI98 176 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 DNASE2O00115 360 aaPredicted RBP2.91□□□□□ -1.94
VPS52-222ENST00000495981 MRPS12O15235 138 aaKnown RBP2.91□□□□□ -1.94
VPS52-222ENST00000495981 MED6O75586 246 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 PGAM2P15259 253 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 TBPP20226 339 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 HLA-DMAP28067 261 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 OPRK1P41145 380 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 RND2P52198 227 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 AKR1C2P52895 323 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 RBX1P62877 108 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 NEDD8Q15843 81 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 ZNF79Q15937 498 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 FAM222AQ5U5X8 452 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 PRSS54Q6PEW0 395 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 ZNF546Q86UE3 836 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 HSD17B11Q8NBQ5 300 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 DUSP18Q8NEJ0 188 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 GPR146Q96CH1 333 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 YIPF6Q96EC8 236 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 FAM210BQ96KR6 192 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 PRRT1Q99946 306 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 KRTAP1-5Q9BYS1 174 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 XCL2Q9UBD3 114 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 NAGKQ9UJ70 344 aa2.91□□□□□ -1.94
VPS52-222ENST00000495981 IGKV1D-37A0A075B6S9 117 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 A0A1B0GV90 55 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms