RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 IGHV1-69-2A0A0G2JMI3 117 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 TRDV1A0A1B0GX56 115 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 A0A1W2PQD3 144 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 C20orf202A1L168 122 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 FNDC10F2Z333 226 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 C5orf67F2Z3F1 127 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 LST1O00453 97 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 RAB5CP51148 216 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 TAS2R20P59543 309 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 RPS25P62851 125 aaKnown RBP2.48□□□□□ -2.01
CCDC39-207ENST00000495817 PSG9Q00887 426 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 FABP9Q0Z7S8 132 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 Q6ZS49 121 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 SLC22A24Q8N4F4 322 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 Q8NDZ9 215 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 OR4E2Q8NGC2 313 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 OR5A1Q8NGJ0 315 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 ISOC1Q96CN7 298 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 MRPS24Q96EL2 167 aaKnown RBP2.48□□□□□ -2.01
CCDC39-207ENST00000495817 ZC2HC1AQ96GY0 325 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 OR8D2Q9GZM6 311 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 TMEM106BQ9NUM4 274 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 TVP23BQ9NYZ1 205 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 PCTPQ9UKL6 214 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 Q9Y3F1 56 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 ZNF292O60281 2723 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 COL4A2P08572 1712 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 PLXNA4Q9HCM2 1894 aa2.48□□□□□ -2.01
CCDC39-207ENST00000495817 TRBV19A0A075B6N1 114 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 LOC107984640A0A0U1RRK4 108 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 LOC100130705A0A1B0GUX0 176 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 SPAARA0A1B0GVQ0 90 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 MDFIC2A0A1B0GVS7 189 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 A8MUN3 132 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 J3QQQ9 107 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 M0R2Z0 102 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 AIPO00170 330 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 GGCTO75223 188 aaKnown RBP2.47□□□□□ -2.01
CCDC39-207ENST00000495817 IFNA7P01567 189 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 SMIM10L2AP0DMW4 78 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 SMIM10L2BP0DMW5 78 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 EVI2AP22794 236 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 LHFPL1Q86WI0 220 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 PDZD9Q8IXQ8 264 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 NMNAT3Q96T66 252 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 LXNQ9BS40 222 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 PRADC1Q9BSG0 188 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 CST9LQ9H4G1 147 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 NDUFB11Q9NX14 153 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 OR5AC2Q9NZP5 309 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 TP73-AS1Q9UF72 201 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 NAT8BQ9UHF3 227 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 AK3Q9UIJ7 227 aa2.47□□□□□ -2.01
CCDC39-207ENST00000495817 NYNRINQ9P2P1 1898 aaKnown RBP2.47□□□□□ -2.01
CCDC39-207ENST00000495817 CITO14578 2027 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 CHD6Q8TD26 2715 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 IGKV1D-43A0A0B4J1Z2 117 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 GABARAPH6UMI1 98 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 J3QRK9 145 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 CORTO00230 105 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 OVOL1O14753 267 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 SCTP09683 121 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 PPIBP23284 216 aaKnown RBP2.46□□□□□ -2.02
CCDC39-207ENST00000495817 EIF2B2P49770 351 aaKnown RBP2.46□□□□□ -2.02
CCDC39-207ENST00000495817 PKIAP61925 76 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 PPP3R1P63098 170 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 SELENOWP63302 87 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 PABPC1L2AQ5JQF8 200 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 NCMAPQ5T1S8 102 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 LYRM7Q5U5X0 104 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 GLIPR1L1Q6UWM5 242 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 KTN1-AS1Q86SY8 53 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 TCTE3Q8IZS6 198 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 PPTC7Q8NI37 304 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 MRPL30Q8TCC3 161 aaKnown RBP2.46□□□□□ -2.02
CCDC39-207ENST00000495817 ZNF418Q8TF45 676 aaPredicted RBP2.46□□□□□ -2.02
CCDC39-207ENST00000495817 SFT2D1Q8WV19 159 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 BORCS8Q96FH0 119 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 NAA38Q9BRA0 125 aaKnown RBP2.46□□□□□ -2.02
CCDC39-207ENST00000495817 TTTY12Q9BZ98 90 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 COMMD5Q9GZQ3 224 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 FBXL12Q9NXK8 326 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 ZFP30Q9Y2G7 519 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 BAHCC1Q9P281 2608 aa2.46□□□□□ -2.02
CCDC39-207ENST00000495817 FREM2Q5SZK8 3169 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 MYO7AQ13402 2215 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 ARHGAP32A7KAX9 2087 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 CACNA1BQ00975 2339 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 TRGV5A0A0B4J1U4 118 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 TRAV41A0A0B4J266 112 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 DPRXA6NFQ7 191 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 IFNA17P01571 189 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 P0DMU3 169 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 FAM231AP0DMU4 169 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 FAM231CP0DMU5 169 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 LINC00694P0DN24 101 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 BCL2P10415 239 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 FKBP2P26885 142 aaKnown RBP2.45□□□□□ -2.02
CCDC39-207ENST00000495817 CD52P31358 61 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 CCR2P41597 374 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms