RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 VGLL1Q99990 258 aa18.36■□□□□ 0.53
PPP1R3F-205ENST00000495799 SELENOKQ9Y6D0 94 aa18.36■□□□□ 0.53
PPP1R3F-205ENST00000495799 CT45A10P0DMU9 189 aa18.35■□□□□ 0.53
PPP1R3F-205ENST00000495799 TFPI2P48307 235 aa18.35■□□□□ 0.53
PPP1R3F-205ENST00000495799 DEFB114Q30KQ6 69 aa18.35■□□□□ 0.53
PPP1R3F-205ENST00000495799 PRR27Q6MZM9 219 aa18.35■□□□□ 0.53
PPP1R3F-205ENST00000495799 KCNIP4Q6PIL6 250 aa18.35■□□□□ 0.53
PPP1R3F-205ENST00000495799 IMMP2LQ96T52 175 aa18.35■□□□□ 0.53
PPP1R3F-205ENST00000495799 DAZAP1Q96EP5 407 aaKnown RBP18.34■□□□□ 0.53
PPP1R3F-205ENST00000495799 PRR25Q96S07 402 aa18.34■□□□□ 0.53
PPP1R3F-205ENST00000495799 PPP1R14DQ9NXH3 145 aa18.34■□□□□ 0.53
PPP1R3F-205ENST00000495799 SETXQ7Z333 2677 aaKnown RBP18.34■□□□□ 0.53
PPP1R3F-205ENST00000495799 ZNF138P52744 262 aa18.33■□□□□ 0.53
PPP1R3F-205ENST00000495799 CITED1Q99966 193 aa18.33■□□□□ 0.53
PPP1R3F-205ENST00000495799 COX8CQ7Z4L0 72 aa18.33■□□□□ 0.52
PPP1R3F-205ENST00000495799 LINC00477Q96M19 166 aa18.33■□□□□ 0.52
PPP1R3F-205ENST00000495799 RNASE7Q9H1E1 156 aaKnown RBP18.33■□□□□ 0.52
PPP1R3F-205ENST00000495799 LENEPQ9Y5L5 61 aa18.33■□□□□ 0.52
PPP1R3F-205ENST00000495799 GATCO43716 136 aaKnown RBP18.32■□□□□ 0.52
PPP1R3F-205ENST00000495799 ERCC8Q13216 396 aa18.32■□□□□ 0.52
PPP1R3F-205ENST00000495799 SPAG8Q99932 426 aaPredicted RBP18.32■□□□□ 0.52
PPP1R3F-205ENST00000495799 ZNF705GA8MUZ8 300 aaPredicted RBP18.31■□□□□ 0.52
PPP1R3F-205ENST00000495799 NPIPB6E9PJ23 425 aa18.31■□□□□ 0.52
PPP1R3F-205ENST00000495799 PRB4P10163 310 aaPredicted RBP18.31■□□□□ 0.52
PPP1R3F-205ENST00000495799 TMEM61Q8N0U2 210 aa18.31■□□□□ 0.52
PPP1R3F-205ENST00000495799 OR8A1Q8NGG7 326 aa18.31■□□□□ 0.52
PPP1R3F-205ENST00000495799 AGPAT4-IT1Q9H0P7 198 aa18.31■□□□□ 0.52
PPP1R3F-205ENST00000495799 V9GYV3 84 aa18.31■□□□□ 0.52
PPP1R3F-205ENST00000495799 OR4C46A6NHA9 309 aa18.3■□□□□ 0.52
PPP1R3F-205ENST00000495799 ZNF688P0C7X2 276 aa18.3■□□□□ 0.52
PPP1R3F-205ENST00000495799 SMUG1Q53HV7 270 aa18.3■□□□□ 0.52
PPP1R3F-205ENST00000495799 PSMG4Q5JS54 123 aa18.3■□□□□ 0.52
PPP1R3F-205ENST00000495799 NUDT10Q8NFP7 164 aa18.3■□□□□ 0.52
PPP1R3F-205ENST00000495799 Q8TAT8 98 aa18.3■□□□□ 0.52
PPP1R3F-205ENST00000495799 NUDT11Q96G61 164 aa18.3■□□□□ 0.52
PPP1R3F-205ENST00000495799 ZC2HC1AQ96GY0 325 aa18.3■□□□□ 0.52
PPP1R3F-205ENST00000495799 BTF3L4Q96K17 158 aa18.3■□□□□ 0.52
PPP1R3F-205ENST00000495799 IL36BQ9NZH7 164 aa18.3■□□□□ 0.52
PPP1R3F-205ENST00000495799 URGCP-MRPS24S4R325 110 aa18.3■□□□□ 0.52
PPP1R3F-205ENST00000495799 C2CD3Q4AC94 2353 aa18.29■□□□□ 0.52
PPP1R3F-205ENST00000495799 P01737 135 aa18.29■□□□□ 0.52
PPP1R3F-205ENST00000495799 ELOBQ15370 118 aa18.29■□□□□ 0.52
PPP1R3F-205ENST00000495799 CD300EQ496F6 205 aaPredicted RBP18.29■□□□□ 0.52
PPP1R3F-205ENST00000495799 FAM24BQ8N5W8 94 aa18.29■□□□□ 0.52
PPP1R3F-205ENST00000495799 OR2K2Q8NGT1 345 aa18.29■□□□□ 0.52
PPP1R3F-205ENST00000495799 C19orf71A6NCJ1 209 aa18.28■□□□□ 0.52
PPP1R3F-205ENST00000495799 SAP30O75446 220 aa18.28■□□□□ 0.52
PPP1R3F-205ENST00000495799 HIST1H1AQ02539 215 aaPredicted RBP18.28■□□□□ 0.52
PPP1R3F-205ENST00000495799 OR4B1Q8NGF8 309 aa18.28■□□□□ 0.52
PPP1R3F-205ENST00000495799 C8orf49Q96NF6 230 aa18.28■□□□□ 0.52
PPP1R3F-205ENST00000495799 COLCA2A8K830 154 aa18.28■□□□□ 0.52
PPP1R3F-205ENST00000495799 KRTAP24-1Q3LI83 254 aa18.28■□□□□ 0.52
PPP1R3F-205ENST00000495799 YPEL4Q96NS1 127 aa18.28■□□□□ 0.52
PPP1R3F-205ENST00000495799 TRBV7-9A0A0J9YWB2 115 aa18.27■□□□□ 0.51
PPP1R3F-205ENST00000495799 PFN1P07737 140 aaKnown RBP18.27■□□□□ 0.51
PPP1R3F-205ENST00000495799 CT83Q5H943 113 aa18.27■□□□□ 0.51
PPP1R3F-205ENST00000495799 FAM162BQ5T6X4 162 aa18.27■□□□□ 0.51
PPP1R3F-205ENST00000495799 EBLN2Q6P2I7 272 aa18.27■□□□□ 0.51
PPP1R3F-205ENST00000495799 LINC00482Q8N8I6 264 aa18.27■□□□□ 0.51
PPP1R3F-205ENST00000495799 RPP21Q9H633 154 aaKnown RBP18.27■□□□□ 0.51
PPP1R3F-205ENST00000495799 TRAV9-1A0A075B6T8 112 aa18.26■□□□□ 0.51
PPP1R3F-205ENST00000495799 GPR61Q9BZJ8 451 aa18.26■□□□□ 0.51
PPP1R3F-205ENST00000495799 DUSP14O95147 198 aaKnown RBP18.25■□□□□ 0.51
PPP1R3F-205ENST00000495799 ASCL2Q99929 193 aa18.25■□□□□ 0.51
PPP1R3F-205ENST00000495799 TRBV24-1A0A075B6N3 115 aa18.24■□□□□ 0.51
PPP1R3F-205ENST00000495799 RPL19P84098 196 aaKnown RBP18.24■□□□□ 0.51
PPP1R3F-205ENST00000495799 LINC00322Q6ZN03 302 aaPredicted RBP18.24■□□□□ 0.51
PPP1R3F-205ENST00000495799 FOXI2Q6ZQN5 318 aa18.24■□□□□ 0.51
PPP1R3F-205ENST00000495799 A8MWL6 223 aa18.23■□□□□ 0.51
PPP1R3F-205ENST00000495799 ZNF705DP0CH99 300 aaPredicted RBP18.23■□□□□ 0.51
PPP1R3F-205ENST00000495799 ZNF705BP0CI00 300 aaPredicted RBP18.23■□□□□ 0.51
PPP1R3F-205ENST00000495799 F6UB75 175 aa18.23■□□□□ 0.51
PPP1R3F-205ENST00000495799 ODF3Q96PU9 254 aa18.23■□□□□ 0.51
PPP1R3F-205ENST00000495799 A0A0J9YX75 114 aa18.22■□□□□ 0.51
PPP1R3F-205ENST00000495799 A0A1W2PPQ1 181 aa18.22■□□□□ 0.51
PPP1R3F-205ENST00000495799 FABP5P3A8MUU1 101 aa18.22■□□□□ 0.51
PPP1R3F-205ENST00000495799 SH2D1AO60880 128 aa18.22■□□□□ 0.51
PPP1R3F-205ENST00000495799 IGLV1-51P01701 117 aa18.22■□□□□ 0.51
PPP1R3F-205ENST00000495799 CMC4P56277 68 aaPredicted RBP18.22■□□□□ 0.51
PPP1R3F-205ENST00000495799 TSKUQ8WUA8 353 aa18.22■□□□□ 0.51
PPP1R3F-205ENST00000495799 SAV1Q9H4B6 383 aaPredicted RBP18.22■□□□□ 0.51
PPP1R3F-205ENST00000495799 TGIF2-C20orf24A0A0A6YYL0 155 aa18.21■□□□□ 0.51
PPP1R3F-205ENST00000495799 SMIM27A0A1W2PRY6 76 aa18.21■□□□□ 0.51
PPP1R3F-205ENST00000495799 RAB5AP20339 215 aa18.21■□□□□ 0.51
PPP1R3F-205ENST00000495799 CRIP1P50238 77 aa18.21■□□□□ 0.51
PPP1R3F-205ENST00000495799 OR2D3Q8NGH3 330 aa18.21■□□□□ 0.51
PPP1R3F-205ENST00000495799 FAM210BQ96KR6 192 aa18.21■□□□□ 0.51
PPP1R3F-205ENST00000495799 PYGO2Q9BRQ0 406 aa18.21■□□□□ 0.51
PPP1R3F-205ENST00000495799 XKRY2A2RUG3 117 aa18.2■□□□□ 0.5
PPP1R3F-205ENST00000495799 FAM3BP58499 235 aaPredicted RBP18.2■□□□□ 0.5
PPP1R3F-205ENST00000495799 DEFB131AP59861 70 aa18.2■□□□□ 0.5
PPP1R3F-205ENST00000495799 DEFB1P60022 68 aa18.2■□□□□ 0.5
PPP1R3F-205ENST00000495799 PRIMA1Q86XR5 153 aa18.2■□□□□ 0.5
PPP1R3F-205ENST00000495799 ZNF747Q9BV97 191 aa18.2■□□□□ 0.5
PPP1R3F-205ENST00000495799 GFRA4Q9GZZ7 299 aa18.2■□□□□ 0.5
PPP1R3F-205ENST00000495799 CXCL1P09341 107 aa18.19■□□□□ 0.5
PPP1R3F-205ENST00000495799 LEPP41159 167 aa18.19■□□□□ 0.5
PPP1R3F-205ENST00000495799 INSL3P51460 131 aa18.19■□□□□ 0.5
PPP1R3F-205ENST00000495799 FAM19A4Q96LR4 140 aa18.19■□□□□ 0.5
PPP1R3F-205ENST00000495799 MAP6D1Q9H9H5 199 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms