RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 PDE6HQ13956 83 aa12.79□□□□□ -0.36
CLCNKA-207ENST00000495784 ZNF680Q8NEM1 530 aa12.79□□□□□ -0.36
CLCNKA-207ENST00000495784 LINC00477Q96M19 166 aa12.79□□□□□ -0.36
CLCNKA-207ENST00000495784 NPCDR1Q9BY65 106 aa12.79□□□□□ -0.36
CLCNKA-207ENST00000495784 AAMDCQ9H7C9 122 aa12.79□□□□□ -0.36
CLCNKA-207ENST00000495784 H3BNG1 76 aa12.78□□□□□ -0.36
CLCNKA-207ENST00000495784 GCSAMLQ5JQS6 135 aa12.78□□□□□ -0.36
CLCNKA-207ENST00000495784 EXOC3-AS1Q8N2X6 119 aa12.78□□□□□ -0.36
CLCNKA-207ENST00000495784 GSN-AS1Q9NRJ2 163 aa12.78□□□□□ -0.36
CLCNKA-207ENST00000495784 KLLNB2CW77 178 aa12.77□□□□□ -0.37
CLCNKA-207ENST00000495784 RNASE4P34096 147 aaKnown RBP12.77□□□□□ -0.37
CLCNKA-207ENST00000495784 CD300CQ08708 224 aa12.77□□□□□ -0.37
CLCNKA-207ENST00000495784 BTN1A1Q13410 526 aa12.77□□□□□ -0.37
CLCNKA-207ENST00000495784 ESRGQ1W209 222 aa12.77□□□□□ -0.37
CLCNKA-207ENST00000495784 THAP6Q8TBB0 222 aa12.77□□□□□ -0.37
CLCNKA-207ENST00000495784 AGPAT4-IT1Q9H0P7 198 aa12.77□□□□□ -0.37
CLCNKA-207ENST00000495784 TRGV1A0A0A0MS02 117 aa12.76□□□□□ -0.37
CLCNKA-207ENST00000495784 GPX1P07203 203 aa12.76□□□□□ -0.37
CLCNKA-207ENST00000495784 ICAM4Q14773 271 aa12.76□□□□□ -0.37
CLCNKA-207ENST00000495784 EIF4E3Q8N5X7 224 aaKnown RBP12.76□□□□□ -0.37
CLCNKA-207ENST00000495784 OR5C1Q8NGR4 320 aa12.76□□□□□ -0.37
CLCNKA-207ENST00000495784 UPK3BQ9BT76 320 aa12.76□□□□□ -0.37
CLCNKA-207ENST00000495784 SLC25A31Q9H0C2 315 aa12.76□□□□□ -0.37
CLCNKA-207ENST00000495784 MRPS16Q9Y3D3 137 aaKnown RBP12.76□□□□□ -0.37
CLCNKA-207ENST00000495784 ABCA13Q86UQ4 5058 aa12.75□□□□□ -0.37
CLCNKA-207ENST00000495784 ZNF324O75467 553 aaPredicted RBP12.75□□□□□ -0.37
CLCNKA-207ENST00000495784 NHLH2Q02577 135 aa12.75□□□□□ -0.37
CLCNKA-207ENST00000495784 TMEM78Q5T7P6 136 aa12.75□□□□□ -0.37
CLCNKA-207ENST00000495784 FAM122CQ6P4D5 195 aa12.75□□□□□ -0.37
CLCNKA-207ENST00000495784 C9orf47Q6ZRZ4 202 aa12.75□□□□□ -0.37
CLCNKA-207ENST00000495784 MIR17HGQ75NE6 70 aa12.75□□□□□ -0.37
CLCNKA-207ENST00000495784 C11orf72Q8NBR9 251 aa12.75□□□□□ -0.37
CLCNKA-207ENST00000495784 FAM19A4Q96LR4 140 aa12.75□□□□□ -0.37
CLCNKA-207ENST00000495784 LINC00467Q9BRT7 94 aa12.75□□□□□ -0.37
CLCNKA-207ENST00000495784 SLC25A2Q9BXI2 301 aa12.75□□□□□ -0.37
CLCNKA-207ENST00000495784 Q9H3A6 140 aa12.75□□□□□ -0.37
CLCNKA-207ENST00000495784 FUT9Q9Y231 359 aa12.75□□□□□ -0.37
CLCNKA-207ENST00000495784 IGKV2-40A0A087WW87 121 aaPredicted RBP12.74□□□□□ -0.37
CLCNKA-207ENST00000495784 IGKV2D-40P01614 121 aaPredicted RBP12.74□□□□□ -0.37
CLCNKA-207ENST00000495784 CRISP2P16562 243 aa12.74□□□□□ -0.37
CLCNKA-207ENST00000495784 ASAH1Q13510 395 aa12.74□□□□□ -0.37
CLCNKA-207ENST00000495784 ANXA2RQ3ZCQ2 193 aa12.74□□□□□ -0.37
CLCNKA-207ENST00000495784 ENKURQ8TC29 256 aa12.74□□□□□ -0.37
CLCNKA-207ENST00000495784 C18orf15Q96N68 181 aa12.74□□□□□ -0.37
CLCNKA-207ENST00000495784 KRTAP1-5Q9BYS1 174 aa12.74□□□□□ -0.37
CLCNKA-207ENST00000495784 KCNIP2Q9NS61 270 aa12.74□□□□□ -0.37
CLCNKA-207ENST00000495784 A0A1W2PPQ1 181 aa12.73□□□□□ -0.37
CLCNKA-207ENST00000495784 E5RGE8 158 aa12.73□□□□□ -0.37
CLCNKA-207ENST00000495784 RGS13O14921 159 aa12.73□□□□□ -0.37
CLCNKA-207ENST00000495784 SIX6O95475 246 aa12.73□□□□□ -0.37
CLCNKA-207ENST00000495784 NMBP08949 121 aa12.73□□□□□ -0.37
CLCNKA-207ENST00000495784 NBEAP1P0C6P0 100 aa12.73□□□□□ -0.37
CLCNKA-207ENST00000495784 LRRC37A5PQ49AS3 106 aa12.73□□□□□ -0.37
CLCNKA-207ENST00000495784 LINC00299Q6ZSB3 139 aa12.73□□□□□ -0.37
CLCNKA-207ENST00000495784 S100ZQ8WXG8 99 aa12.73□□□□□ -0.37
CLCNKA-207ENST00000495784 VSIG2Q96IQ7 327 aa12.73□□□□□ -0.37
CLCNKA-207ENST00000495784 FAM167A-AS1Q96KT0 104 aa12.73□□□□□ -0.37
CLCNKA-207ENST00000495784 OR51M1Q9H341 326 aa12.73□□□□□ -0.37
CLCNKA-207ENST00000495784 KLF12Q9Y4X4 402 aa12.73□□□□□ -0.37
CLCNKA-207ENST00000495784 HSPG2P98160 4391 aa12.72□□□□□ -0.37
CLCNKA-207ENST00000495784 CDK2AP2O75956 126 aa12.72□□□□□ -0.37
CLCNKA-207ENST00000495784 TCL1AP56279 114 aa12.72□□□□□ -0.37
CLCNKA-207ENST00000495784 SPATA12Q7Z6I5 190 aa12.72□□□□□ -0.37
CLCNKA-207ENST00000495784 VGLL1Q99990 258 aa12.72□□□□□ -0.37
CLCNKA-207ENST00000495784 MRPL32Q9BYC8 188 aaKnown RBP12.72□□□□□ -0.37
CLCNKA-207ENST00000495784 OR5AC2Q9NZP5 309 aa12.72□□□□□ -0.37
CLCNKA-207ENST00000495784 LRP1BQ9NZR2 4599 aa12.71□□□□□ -0.37
CLCNKA-207ENST00000495784 A0A096LPF7 62 aa12.71□□□□□ -0.37
CLCNKA-207ENST00000495784 SPINK4O60575 86 aa12.71□□□□□ -0.37
CLCNKA-207ENST00000495784 IBA57Q5T440 356 aaKnown RBP12.71□□□□□ -0.37
CLCNKA-207ENST00000495784 ZFAND2AQ8N6M9 145 aa12.71□□□□□ -0.37
CLCNKA-207ENST00000495784 ARPC5LQ9BPX5 153 aa12.71□□□□□ -0.37
CLCNKA-207ENST00000495784 PAXXQ9BUH6 204 aa12.71□□□□□ -0.37
CLCNKA-207ENST00000495784 NMES1Q9C002 83 aa12.71□□□□□ -0.37
CLCNKA-207ENST00000495784 ZNF492Q9P255 531 aa12.71□□□□□ -0.37
CLCNKA-207ENST00000495784 OR10J4P0C629 311 aa12.7□□□□□ -0.38
CLCNKA-207ENST00000495784 PRR9Q5T870 116 aa12.7□□□□□ -0.38
CLCNKA-207ENST00000495784 FXYD5Q96DB9 178 aa12.7□□□□□ -0.38
CLCNKA-207ENST00000495784 KRTAP4-5Q9BYR2 181 aa12.7□□□□□ -0.38
CLCNKA-207ENST00000495784 WDR61Q9GZS3 305 aaKnown RBP12.7□□□□□ -0.38
CLCNKA-207ENST00000495784 TP53TG3Q9ULZ0 132 aa12.7□□□□□ -0.38
CLCNKA-207ENST00000495784 IGHV1OR15-1A0A075B7D0 117 aa12.69□□□□□ -0.38
CLCNKA-207ENST00000495784 C17orf112F2Z3M2 114 aa12.69□□□□□ -0.38
CLCNKA-207ENST00000495784 PAX4O43316 350 aa12.69□□□□□ -0.38
CLCNKA-207ENST00000495784 OR7C2O60412 319 aa12.69□□□□□ -0.38
CLCNKA-207ENST00000495784 IGHV3-53P01767 116 aa12.69□□□□□ -0.38
CLCNKA-207ENST00000495784 BTF3P20290 206 aaKnown RBP12.69□□□□□ -0.38
CLCNKA-207ENST00000495784 CSN1S1P47710 185 aa12.69□□□□□ -0.38
CLCNKA-207ENST00000495784 ZNF138P52744 262 aa12.69□□□□□ -0.38
CLCNKA-207ENST00000495784 CYCSP99999 105 aaKnown RBP12.69□□□□□ -0.38
CLCNKA-207ENST00000495784 Q8TAT8 98 aa12.69□□□□□ -0.38
CLCNKA-207ENST00000495784 PHYHIPLQ96FC7 376 aa12.69□□□□□ -0.38
CLCNKA-207ENST00000495784 ST6GAL2Q96JF0 529 aa12.69□□□□□ -0.38
CLCNKA-207ENST00000495784 MRPL16Q9NX20 251 aaKnown RBP12.69□□□□□ -0.38
CLCNKA-207ENST00000495784 H0YIZ8 118 aa12.68□□□□□ -0.38
CLCNKA-207ENST00000495784 ICOSQ9Y6W8 199 aa12.68□□□□□ -0.38
CLCNKA-207ENST00000495784 TRBV7-9A0A0J9YWB2 115 aa12.67□□□□□ -0.38
CLCNKA-207ENST00000495784 PRAF2O60831 178 aa12.67□□□□□ -0.38
CLCNKA-207ENST00000495784 UPK1BO75841 260 aa12.67□□□□□ -0.38
CLCNKA-207ENST00000495784 RANP62826 216 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms