RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 DEFA3P59666 94 aa5.05□□□□□ -1.6
VPS52-221ENST00000495755 DAZ2Q13117 558 aaKnown RBP5.05□□□□□ -1.6
VPS52-221ENST00000495755 C9orf47Q6ZRZ4 202 aa5.05□□□□□ -1.6
VPS52-221ENST00000495755 BLNKQ8WV28 456 aa5.05□□□□□ -1.6
VPS52-221ENST00000495755 FXYD5Q96DB9 178 aa5.05□□□□□ -1.6
VPS52-221ENST00000495755 LINC00477Q96M19 166 aa5.05□□□□□ -1.6
VPS52-221ENST00000495755 PYGO2Q9BRQ0 406 aa5.05□□□□□ -1.6
VPS52-221ENST00000495755 LINC00467Q9BRT7 94 aa5.05□□□□□ -1.6
VPS52-221ENST00000495755 OR51M1Q9H341 326 aa5.05□□□□□ -1.6
VPS52-221ENST00000495755 KCNIP2Q9NS61 270 aa5.05□□□□□ -1.6
VPS52-221ENST00000495755 FUT9Q9Y231 359 aa5.05□□□□□ -1.6
VPS52-221ENST00000495755 HSPB11Q9Y547 144 aa5.05□□□□□ -1.6
VPS52-221ENST00000495755 C7orf71A4D174 169 aa5.04□□□□□ -1.6
VPS52-221ENST00000495755 PRSS29PA6NIE9 313 aa5.04□□□□□ -1.6
VPS52-221ENST00000495755 C17orf112F2Z3M2 114 aa5.04□□□□□ -1.6
VPS52-221ENST00000495755 CRISP2P16562 243 aa5.04□□□□□ -1.6
VPS52-221ENST00000495755 HOXA5P20719 270 aa5.04□□□□□ -1.6
VPS52-221ENST00000495755 CD300CQ08708 224 aa5.04□□□□□ -1.6
VPS52-221ENST00000495755 ICAM4Q14773 271 aa5.04□□□□□ -1.6
VPS52-221ENST00000495755 ZNRF2Q8NHG8 242 aa5.04□□□□□ -1.6
VPS52-221ENST00000495755 RNF141Q8WVD5 230 aa5.04□□□□□ -1.6
VPS52-221ENST00000495755 ZNF503Q96F45 646 aa5.04□□□□□ -1.6
VPS52-221ENST00000495755 ATP5SQ99766 215 aa5.04□□□□□ -1.6
VPS52-221ENST00000495755 VGLL1Q99990 258 aa5.04□□□□□ -1.6
VPS52-221ENST00000495755 PAXXQ9BUH6 204 aa5.04□□□□□ -1.6
VPS52-221ENST00000495755 MRPL32Q9BYC8 188 aaKnown RBP5.04□□□□□ -1.6
VPS52-221ENST00000495755 AAMDCQ9H7C9 122 aa5.04□□□□□ -1.6
VPS52-221ENST00000495755 BATF3Q9NR55 127 aa5.04□□□□□ -1.6
VPS52-221ENST00000495755 LRP1BQ9NZR2 4599 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 IGKV2-40A0A087WW87 121 aaPredicted RBP5.03□□□□□ -1.6
VPS52-221ENST00000495755 GAGE12BA1L429 117 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 SNURFLB1AK76 121 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 GAGE7O76087 117 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 NUDT3O95989 172 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 IGKV2D-40P01614 121 aaPredicted RBP5.03□□□□□ -1.6
VPS52-221ENST00000495755 OR10J4P0C629 311 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 GAGE12FP0CL80 117 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 GAGE12GP0CL81 117 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 GAGE12IP0CL82 117 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 PET100P0DJ07 73 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 RPL12P30050 165 aaKnown RBP5.03□□□□□ -1.6
VPS52-221ENST00000495755 RNASE4P34096 147 aaKnown RBP5.03□□□□□ -1.6
VPS52-221ENST00000495755 BTN1A1Q13410 526 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 ANXA2RQ3ZCQ2 193 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 TMEM78Q5T7P6 136 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 PRR9Q5T870 116 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 FAM122CQ6P4D5 195 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 Q6ZTI0 123 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 ZFAND2AQ8N6M9 145 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 C11orf72Q8NBR9 251 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 PHYHIPLQ96FC7 376 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 ATG101Q9BSB4 218 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 SMIM3Q9BZL3 60 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 WFDC1Q9HC57 220 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 ZNF492Q9P255 531 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 MBD2Q9UBB5 411 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 LINC00588Q9Y4M8 146 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 NACAE9PAV3 2078 aa5.03□□□□□ -1.6
VPS52-221ENST00000495755 TRAV26-1A0A087WT03 109 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 TRBV7-9A0A0J9YWB2 115 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 H3BNG1 76 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 OR7C2O60412 319 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 IFNA5P01569 189 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 GPX1P07203 203 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 M6PRP20645 277 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 ZNF138P52744 262 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 CCL18P55774 89 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 RANP62826 216 aaKnown RBP5.02□□□□□ -1.61
VPS52-221ENST00000495755 OR5I1Q13606 314 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 FFAR4Q5NUL3 377 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 C1orf134Q5TEV5 83 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 Q6ZQT7 251 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 LYPD1Q8N2G4 141 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 EIF4E3Q8N5X7 224 aaKnown RBP5.02□□□□□ -1.61
VPS52-221ENST00000495755 ZNF680Q8NEM1 530 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 SCGB1C1Q8TD33 95 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 RXFP4Q8TDU9 374 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 C18orf15Q96N68 181 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 GSN-AS1Q9NRJ2 163 aa5.02□□□□□ -1.61
VPS52-221ENST00000495755 IGHV1OR15-1A0A075B7D0 117 aa5.01□□□□□ -1.61
VPS52-221ENST00000495755 A0A0J9YY99 117 aa5.01□□□□□ -1.61
VPS52-221ENST00000495755 NBDYA0A0U1RRE5 68 aa5.01□□□□□ -1.61
VPS52-221ENST00000495755 RBAKDNA6NC62 111 aa5.01□□□□□ -1.61
VPS52-221ENST00000495755 SPINK4O60575 86 aa5.01□□□□□ -1.61
VPS52-221ENST00000495755 TCL1AP56279 114 aa5.01□□□□□ -1.61
VPS52-221ENST00000495755 UBE2L3P68036 154 aaKnown RBP5.01□□□□□ -1.61
VPS52-221ENST00000495755 ZNF266Q14584 549 aa5.01□□□□□ -1.61
VPS52-221ENST00000495755 SOHLH1Q5JUK2 328 aa5.01□□□□□ -1.61
VPS52-221ENST00000495755 IBA57Q5T440 356 aaKnown RBP5.01□□□□□ -1.61
VPS52-221ENST00000495755 Q8TAT8 98 aa5.01□□□□□ -1.61
VPS52-221ENST00000495755 GNPNAT1Q96EK6 184 aaPredicted RBP5.01□□□□□ -1.61
VPS52-221ENST00000495755 Q9H3A6 140 aa5.01□□□□□ -1.61
VPS52-221ENST00000495755 TMPRSS5Q9H3S3 457 aa5.01□□□□□ -1.61
VPS52-221ENST00000495755 TP53TG3Q9ULZ0 132 aa5.01□□□□□ -1.61
VPS52-221ENST00000495755 KLF12Q9Y4X4 402 aa5.01□□□□□ -1.61
VPS52-221ENST00000495755 ALG5Q9Y673 324 aa5.01□□□□□ -1.61
VPS52-221ENST00000495755 APOBP04114 4563 aaKnown RBP5.01□□□□□ -1.61
VPS52-221ENST00000495755 HSPG2P98160 4391 aa5.01□□□□□ -1.61
VPS52-221ENST00000495755 DNAH5Q8TE73 4624 aa5.01□□□□□ -1.61
VPS52-221ENST00000495755 DIRC3C9JPN6 131 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms