RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 ATP5SQ99766 215 aa11□□□□□ -0.65
COL4A2-209ENST00000494852 TIMM8BQ9Y5J9 83 aaPredicted RBP11□□□□□ -0.65
COL4A2-209ENST00000494852 TRBV19A0A075B6N1 114 aa10.99□□□□□ -0.65
COL4A2-209ENST00000494852 ZNF253O75346 499 aa10.99□□□□□ -0.65
COL4A2-209ENST00000494852 TAS2R60P59551 318 aa10.99□□□□□ -0.65
COL4A2-209ENST00000494852 RHOBP62745 196 aa10.99□□□□□ -0.65
COL4A2-209ENST00000494852 C16orf74Q96GX8 76 aa10.99□□□□□ -0.65
COL4A2-209ENST00000494852 LINC01587Q99440 93 aa10.99□□□□□ -0.65
COL4A2-209ENST00000494852 KCNIP2Q9NS61 270 aa10.99□□□□□ -0.65
COL4A2-209ENST00000494852 TRAV12-2A0A075B6T6 113 aa10.98□□□□□ -0.65
COL4A2-209ENST00000494852 PRAC2D3DTV9 90 aa10.98□□□□□ -0.65
COL4A2-209ENST00000494852 C17orf112F2Z3M2 114 aa10.98□□□□□ -0.65
COL4A2-209ENST00000494852 HIST1H1EP10412 219 aaKnown RBP10.98□□□□□ -0.65
COL4A2-209ENST00000494852 GNPNAT1Q96EK6 184 aaPredicted RBP10.98□□□□□ -0.65
COL4A2-209ENST00000494852 SLC25A2Q9BXI2 301 aa10.98□□□□□ -0.65
COL4A2-209ENST00000494852 PPP1R14DQ9NXH3 145 aa10.98□□□□□ -0.65
COL4A2-209ENST00000494852 PYYP10082 97 aa10.97□□□□□ -0.65
COL4A2-209ENST00000494852 ZNF493Q6ZR52 646 aa10.97□□□□□ -0.65
COL4A2-209ENST00000494852 MIR17HGQ75NE6 70 aa10.97□□□□□ -0.65
COL4A2-209ENST00000494852 OR10J6PQ8NGY7 276 aa10.97□□□□□ -0.65
COL4A2-209ENST00000494852 RXFP4Q8TDU9 374 aa10.97□□□□□ -0.65
COL4A2-209ENST00000494852 FAM167A-AS1Q96KT0 104 aa10.97□□□□□ -0.65
COL4A2-209ENST00000494852 SMIM3Q9BZL3 60 aa10.97□□□□□ -0.65
COL4A2-209ENST00000494852 MED28Q9H204 178 aa10.97□□□□□ -0.65
COL4A2-209ENST00000494852 FAT1Q14517 4588 aa10.96□□□□□ -0.65
COL4A2-209ENST00000494852 TRAV26-1A0A087WT03 109 aa10.96□□□□□ -0.65
COL4A2-209ENST00000494852 NDUFB4O95168 129 aa10.96□□□□□ -0.65
COL4A2-209ENST00000494852 IFNA5P01569 189 aa10.96□□□□□ -0.65
COL4A2-209ENST00000494852 M6PRP20645 277 aa10.96□□□□□ -0.65
COL4A2-209ENST00000494852 CDKN1BP46527 198 aa10.96□□□□□ -0.65
COL4A2-209ENST00000494852 OR5I1Q13606 314 aa10.96□□□□□ -0.65
COL4A2-209ENST00000494852 PDE6HQ13956 83 aa10.96□□□□□ -0.65
COL4A2-209ENST00000494852 ESRGQ1W209 222 aa10.96□□□□□ -0.65
COL4A2-209ENST00000494852 LYPD1Q8N2G4 141 aa10.96□□□□□ -0.65
COL4A2-209ENST00000494852 SCGB1C1Q8TD33 95 aa10.96□□□□□ -0.65
COL4A2-209ENST00000494852 MRPL53Q96EL3 112 aaKnown RBP10.96□□□□□ -0.65
COL4A2-209ENST00000494852 MRPL32Q9BYC8 188 aaKnown RBP10.96□□□□□ -0.65
COL4A2-209ENST00000494852 PARD6GQ9BYG4 376 aaPredicted RBP10.96□□□□□ -0.65
COL4A2-209ENST00000494852 WFDC1Q9HC57 220 aa10.96□□□□□ -0.65
COL4A2-209ENST00000494852 NOP10Q9NPE3 64 aaKnown RBP10.96□□□□□ -0.65
COL4A2-209ENST00000494852 PGPEP1Q9NXJ5 209 aa10.96□□□□□ -0.65
COL4A2-209ENST00000494852 MYCBP2O75592 4640 aa10.96□□□□□ -0.66
COL4A2-209ENST00000494852 H3BNG1 76 aa10.95□□□□□ -0.66
COL4A2-209ENST00000494852 HTN1P15515 57 aa10.95□□□□□ -0.66
COL4A2-209ENST00000494852 RNASE8Q8TDE3 154 aaKnown RBP10.95□□□□□ -0.66
COL4A2-209ENST00000494852 TMEM263Q8WUH6 116 aaKnown RBP10.95□□□□□ -0.66
COL4A2-209ENST00000494852 FUT9Q9Y231 359 aa10.95□□□□□ -0.66
COL4A2-209ENST00000494852 MRPS16Q9Y3D3 137 aaKnown RBP10.95□□□□□ -0.66
COL4A2-209ENST00000494852 TIMM9Q9Y5J7 89 aa10.95□□□□□ -0.66
COL4A2-209ENST00000494852 M0R3E3 92 aa10.94□□□□□ -0.66
COL4A2-209ENST00000494852 LINC00612Q8N6U2 182 aa10.94□□□□□ -0.66
COL4A2-209ENST00000494852 BLNKQ8WV28 456 aa10.94□□□□□ -0.66
COL4A2-209ENST00000494852 OR51M1Q9H341 326 aa10.94□□□□□ -0.66
COL4A2-209ENST00000494852 PRELID1Q9Y255 219 aa10.94□□□□□ -0.66
COL4A2-209ENST00000494852 VPS13BQ7Z7G8 4022 aa10.93□□□□□ -0.66
COL4A2-209ENST00000494852 NPIPB6E9PJ23 425 aa10.93□□□□□ -0.66
COL4A2-209ENST00000494852 NBEAP1P0C6P0 100 aa10.93□□□□□ -0.66
COL4A2-209ENST00000494852 CT45A10P0DMU9 189 aa10.93□□□□□ -0.66
COL4A2-209ENST00000494852 XGP55808 180 aa10.93□□□□□ -0.66
COL4A2-209ENST00000494852 RGS21Q2M5E4 152 aa10.93□□□□□ -0.66
COL4A2-209ENST00000494852 FFAR4Q5NUL3 377 aa10.93□□□□□ -0.66
COL4A2-209ENST00000494852 Q6ZRN7 208 aaPredicted RBP10.93□□□□□ -0.66
COL4A2-209ENST00000494852 EXOC3-AS1Q8N2X6 119 aa10.93□□□□□ -0.66
COL4A2-209ENST00000494852 FXYD5Q96DB9 178 aa10.93□□□□□ -0.66
COL4A2-209ENST00000494852 ODF3Q96PU9 254 aa10.93□□□□□ -0.66
COL4A2-209ENST00000494852 A0A0J9YY99 117 aa10.92□□□□□ -0.66
COL4A2-209ENST00000494852 H7BYZ3 331 aa10.92□□□□□ -0.66
COL4A2-209ENST00000494852 GIPP09681 153 aaPredicted RBP10.92□□□□□ -0.66
COL4A2-209ENST00000494852 HOXA5P20719 270 aa10.92□□□□□ -0.66
COL4A2-209ENST00000494852 LINC00315P59091 139 aa10.92□□□□□ -0.66
COL4A2-209ENST00000494852 KIR3DS1Q14943 382 aa10.92□□□□□ -0.66
COL4A2-209ENST00000494852 Q5BKY6 102 aa10.92□□□□□ -0.66
COL4A2-209ENST00000494852 CDPF1Q6NVV7 123 aa10.92□□□□□ -0.66
COL4A2-209ENST00000494852 ASB13Q8WXK3 278 aa10.92□□□□□ -0.66
COL4A2-209ENST00000494852 C20orf144Q9BQM9 153 aa10.92□□□□□ -0.66
COL4A2-209ENST00000494852 PAXXQ9BUH6 204 aa10.92□□□□□ -0.66
COL4A2-209ENST00000494852 AAMDCQ9H7C9 122 aa10.92□□□□□ -0.66
COL4A2-209ENST00000494852 OR10J4P0C629 311 aa10.91□□□□□ -0.66
COL4A2-209ENST00000494852 ICAM4Q14773 271 aa10.91□□□□□ -0.66
COL4A2-209ENST00000494852 Q5VSD8 79 aa10.91□□□□□ -0.66
COL4A2-209ENST00000494852 GFI1BQ5VTD9 330 aa10.91□□□□□ -0.66
COL4A2-209ENST00000494852 FRZBQ92765 325 aa10.91□□□□□ -0.66
COL4A2-209ENST00000494852 AQP10Q96PS8 301 aa10.91□□□□□ -0.66
COL4A2-209ENST00000494852 EREGO14944 169 aa10.9□□□□□ -0.66
COL4A2-209ENST00000494852 OR7C2O60412 319 aa10.9□□□□□ -0.66
COL4A2-209ENST00000494852 LEPP41159 167 aa10.9□□□□□ -0.66
COL4A2-209ENST00000494852 LINC00477Q96M19 166 aa10.9□□□□□ -0.66
COL4A2-209ENST00000494852 TAS2R45P59539 299 aa10.89□□□□□ -0.67
COL4A2-209ENST00000494852 ERCC8Q13216 396 aa10.89□□□□□ -0.67
COL4A2-209ENST00000494852 ZNF266Q14584 549 aa10.89□□□□□ -0.67
COL4A2-209ENST00000494852 ACOT6Q3I5F7 207 aaPredicted RBP10.89□□□□□ -0.67
COL4A2-209ENST00000494852 KHDC3LQ587J8 217 aa10.89□□□□□ -0.67
COL4A2-209ENST00000494852 FAM122CQ6P4D5 195 aa10.89□□□□□ -0.67
COL4A2-209ENST00000494852 PHYHIPLQ96FC7 376 aa10.89□□□□□ -0.67
COL4A2-209ENST00000494852 FAM19A4Q96LR4 140 aa10.89□□□□□ -0.67
COL4A2-209ENST00000494852 AGPAT4-IT1Q9H0P7 198 aa10.89□□□□□ -0.67
COL4A2-209ENST00000494852 SRRM2Q9UQ35 2752 aaKnown RBP10.89□□□□□ -0.67
COL4A2-209ENST00000494852 GAGE12BA1L429 117 aa10.88□□□□□ -0.67
COL4A2-209ENST00000494852 J3KRW8 73 aa10.88□□□□□ -0.67
COL4A2-209ENST00000494852 GAGE7O76087 117 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms