RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 STAG3L3P0CL85 134 aa5.52□□□□□ -1.53
RPGR-210ENST00000494841 ARL14EPLP0DKL9 152 aa5.52□□□□□ -1.53
RPGR-210ENST00000494841 HIST1H1EP10412 219 aaKnown RBP5.52□□□□□ -1.53
RPGR-210ENST00000494841 C4BPBP20851 252 aa5.52□□□□□ -1.53
RPGR-210ENST00000494841 PSMG4Q5JS54 123 aa5.52□□□□□ -1.53
RPGR-210ENST00000494841 FAM74A1Q5RGS3 127 aa5.52□□□□□ -1.53
RPGR-210ENST00000494841 LCN15Q6UWW0 184 aa5.52□□□□□ -1.53
RPGR-210ENST00000494841 FAM213BQ8TBF2 198 aa5.52□□□□□ -1.53
RPGR-210ENST00000494841 LRRC20Q8TCA0 184 aa5.52□□□□□ -1.53
RPGR-210ENST00000494841 SAT2Q96F10 170 aaPredicted RBP5.52□□□□□ -1.53
RPGR-210ENST00000494841 HRH4Q9H3N8 390 aa5.52□□□□□ -1.53
RPGR-210ENST00000494841 RNF24Q9Y225 148 aa5.52□□□□□ -1.53
RPGR-210ENST00000494841 TRBV19A0A075B6N1 114 aa5.51□□□□□ -1.53
RPGR-210ENST00000494841 F6UB75 175 aa5.51□□□□□ -1.53
RPGR-210ENST00000494841 ISLRO14498 428 aa5.51□□□□□ -1.53
RPGR-210ENST00000494841 ZNF705DP0CH99 300 aaPredicted RBP5.51□□□□□ -1.53
RPGR-210ENST00000494841 ZNF705BP0CI00 300 aaPredicted RBP5.51□□□□□ -1.53
RPGR-210ENST00000494841 IGHV4-30-4P0DP06 118 aa5.51□□□□□ -1.53
RPGR-210ENST00000494841 GCHFRP30047 84 aa5.51□□□□□ -1.53
RPGR-210ENST00000494841 ID1P41134 155 aa5.51□□□□□ -1.53
RPGR-210ENST00000494841 TAS2R45P59539 299 aa5.51□□□□□ -1.53
RPGR-210ENST00000494841 SNRPD3P62318 126 aaKnown RBP5.51□□□□□ -1.53
RPGR-210ENST00000494841 RANP62826 216 aaKnown RBP5.51□□□□□ -1.53
RPGR-210ENST00000494841 UBE2L3P68036 154 aaKnown RBP5.51□□□□□ -1.53
RPGR-210ENST00000494841 KHDC3LQ587J8 217 aa5.51□□□□□ -1.53
RPGR-210ENST00000494841 GDF5OSQ5U4N7 250 aa5.51□□□□□ -1.53
RPGR-210ENST00000494841 ALKAL2Q6UX46 152 aa5.51□□□□□ -1.53
RPGR-210ENST00000494841 IQCF2Q8IXL9 164 aa5.51□□□□□ -1.53
RPGR-210ENST00000494841 EXOC3-AS1Q8N2X6 119 aa5.51□□□□□ -1.53
RPGR-210ENST00000494841 PHYHIPLQ96FC7 376 aa5.51□□□□□ -1.53
RPGR-210ENST00000494841 URB1-AS1Q96HZ7 61 aa5.51□□□□□ -1.53
RPGR-210ENST00000494841 TUBA4BQ9H853 241 aa5.51□□□□□ -1.53
RPGR-210ENST00000494841 SRD5A3Q9H8P0 318 aa5.51□□□□□ -1.53
RPGR-210ENST00000494841 ZNF331Q9NQX6 463 aaPredicted RBP5.51□□□□□ -1.53
RPGR-210ENST00000494841 CTXND1A0A1B0GTU2 59 aa5.5□□□□□ -1.53
RPGR-210ENST00000494841 MAP1LC3B2A6NCE7 125 aa5.5□□□□□ -1.53
RPGR-210ENST00000494841 RBMY1BA6NDE4 496 aaKnown RBP5.5□□□□□ -1.53
RPGR-210ENST00000494841 RBMY1EA6NEQ0 496 aaKnown RBP5.5□□□□□ -1.53
RPGR-210ENST00000494841 UMAD1C9J7I0 102 aa5.5□□□□□ -1.53
RPGR-210ENST00000494841 PRAC2D3DTV9 90 aa5.5□□□□□ -1.53
RPGR-210ENST00000494841 CXorf1O96002 111 aa5.5□□□□□ -1.53
RPGR-210ENST00000494841 IGKV3-20P01619 116 aa5.5□□□□□ -1.53
RPGR-210ENST00000494841 RBMY1DP0C7P1 496 aaKnown RBP5.5□□□□□ -1.53
RPGR-210ENST00000494841 RPL35AP18077 110 aaKnown RBP5.5□□□□□ -1.53
RPGR-210ENST00000494841 PSMB3P49720 205 aa5.5□□□□□ -1.53
RPGR-210ENST00000494841 MEOX2P50222 304 aa5.5□□□□□ -1.53
RPGR-210ENST00000494841 SULT1A2P50226 295 aa5.5□□□□□ -1.53
RPGR-210ENST00000494841 CMC4P56277 68 aaPredicted RBP5.5□□□□□ -1.53
RPGR-210ENST00000494841 GUK1Q16774 197 aa5.5□□□□□ -1.53
RPGR-210ENST00000494841 ACTL10Q5JWF8 245 aa5.5□□□□□ -1.53
RPGR-210ENST00000494841 EIF5AL1Q6IS14 154 aaKnown RBP5.5□□□□□ -1.53
RPGR-210ENST00000494841 PQLC2Q6ZP29 291 aa5.5□□□□□ -1.53
RPGR-210ENST00000494841 ZNF738Q8NE65 137 aa5.5□□□□□ -1.53
RPGR-210ENST00000494841 MRAPQ8TCY5 172 aa5.5□□□□□ -1.53
RPGR-210ENST00000494841 SFT2D1Q8WV19 159 aa5.5□□□□□ -1.53
RPGR-210ENST00000494841 MAP1LC3BQ9GZQ8 125 aa5.5□□□□□ -1.53
RPGR-210ENST00000494841 PGPA6NDG6 321 aa5.49□□□□□ -1.53
RPGR-210ENST00000494841 M0R3E3 92 aa5.49□□□□□ -1.53
RPGR-210ENST00000494841 FRMD6-AS1P0C7T7 363 aa5.49□□□□□ -1.53
RPGR-210ENST00000494841 UBE2G2P60604 165 aa5.49□□□□□ -1.53
RPGR-210ENST00000494841 CCL20P78556 96 aa5.49□□□□□ -1.53
RPGR-210ENST00000494841 PSG3Q16557 428 aa5.49□□□□□ -1.53
RPGR-210ENST00000494841 SUN5Q8TC36 379 aa5.49□□□□□ -1.53
RPGR-210ENST00000494841 PCNPQ8WW12 178 aaKnown RBP5.49□□□□□ -1.53
RPGR-210ENST00000494841 MBD3L1Q8WWY6 194 aa5.49□□□□□ -1.53
RPGR-210ENST00000494841 ASCL2Q99929 193 aa5.49□□□□□ -1.53
RPGR-210ENST00000494841 SLC50A1Q9BRV3 221 aa5.49□□□□□ -1.53
RPGR-210ENST00000494841 Q9H3A6 140 aa5.49□□□□□ -1.53
RPGR-210ENST00000494841 TGP01266 2768 aa5.48□□□□□ -1.53
RPGR-210ENST00000494841 CBY3A6NI87 242 aa5.48□□□□□ -1.53
RPGR-210ENST00000494841 ZNF705EA8MWA4 302 aaPredicted RBP5.48□□□□□ -1.53
RPGR-210ENST00000494841 H3BMM0 161 aa5.48□□□□□ -1.53
RPGR-210ENST00000494841 RAB5CP51148 216 aa5.48□□□□□ -1.53
RPGR-210ENST00000494841 PSG9Q00887 426 aa5.48□□□□□ -1.53
RPGR-210ENST00000494841 PDE6HQ13956 83 aa5.48□□□□□ -1.53
RPGR-210ENST00000494841 SAMD13Q5VXD3 122 aa5.48□□□□□ -1.53
RPGR-210ENST00000494841 TEX261Q6UWH6 196 aa5.48□□□□□ -1.53
RPGR-210ENST00000494841 DPPA3Q6W0C5 159 aa5.48□□□□□ -1.53
RPGR-210ENST00000494841 LINC00322Q6ZN03 302 aaPredicted RBP5.48□□□□□ -1.53
RPGR-210ENST00000494841 C9orf47Q6ZRZ4 202 aa5.48□□□□□ -1.53
RPGR-210ENST00000494841 STHQ8IWL8 128 aa5.48□□□□□ -1.53
RPGR-210ENST00000494841 OR4B1Q8NGF8 309 aa5.48□□□□□ -1.53
RPGR-210ENST00000494841 TMEM18Q96B42 140 aa5.48□□□□□ -1.53
RPGR-210ENST00000494841 RPUSD4Q96CM3 377 aaKnown RBP5.48□□□□□ -1.53
RPGR-210ENST00000494841 FAM110AQ9BQ89 295 aa5.48□□□□□ -1.53
RPGR-210ENST00000494841 SAV1Q9H4B6 383 aaPredicted RBP5.48□□□□□ -1.53
RPGR-210ENST00000494841 TMEM167BQ9NRX6 74 aa5.48□□□□□ -1.53
RPGR-210ENST00000494841 YTHDF2Q9Y5A9 579 aaKnown RBP5.48□□□□□ -1.53
RPGR-210ENST00000494841 LOC102724200A0A096LPH7 203 aaPredicted RBP5.47□□□□□ -1.53
RPGR-210ENST00000494841 A0A0J9YX75 114 aa5.47□□□□□ -1.53
RPGR-210ENST00000494841 A8MZ25 164 aa5.47□□□□□ -1.53
RPGR-210ENST00000494841 ZNF253O75346 499 aa5.47□□□□□ -1.53
RPGR-210ENST00000494841 CNN1P51911 297 aaKnown RBP5.47□□□□□ -1.53
RPGR-210ENST00000494841 FXYD7P58549 80 aa5.47□□□□□ -1.53
RPGR-210ENST00000494841 GNG5P63218 68 aa5.47□□□□□ -1.53
RPGR-210ENST00000494841 HIST1H1AQ02539 215 aaPredicted RBP5.47□□□□□ -1.53
RPGR-210ENST00000494841 ERCC8Q13216 396 aa5.47□□□□□ -1.53
RPGR-210ENST00000494841 EBLN2Q6P2I7 272 aa5.47□□□□□ -1.53
RPGR-210ENST00000494841 FOXI2Q6ZQN5 318 aa5.47□□□□□ -1.53
RPGR-210ENST00000494841 TRPT1Q86TN4 253 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms