RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 OR10K1Q8NGX5 313 aa1.95□□□□□ -2.1
CMSS1-207ENST00000494412 AQP3Q92482 292 aa1.95□□□□□ -2.1
CMSS1-207ENST00000494412 DDA1Q9BW61 102 aa1.95□□□□□ -2.1
CMSS1-207ENST00000494412 CST9LQ9H4G1 147 aa1.95□□□□□ -2.1
CMSS1-207ENST00000494412 TLN1Q9Y490 2541 aaKnown RBP1.95□□□□□ -2.1
CMSS1-207ENST00000494412 LOC400499M0QZD8 3231 aa1.95□□□□□ -2.1
CMSS1-207ENST00000494412 ZFHX3Q15911 3703 aa1.95□□□□□ -2.1
CMSS1-207ENST00000494412 DENND4CQ5VZ89 1909 aa1.95□□□□□ -2.1
CMSS1-207ENST00000494412 RTL9Q8NET4 1388 aa1.95□□□□□ -2.1
CMSS1-207ENST00000494412 OTOGLQ3ZCN5 2332 aa1.95□□□□□ -2.1
CMSS1-207ENST00000494412 M0R378 163 aa1.94□□□□□ -2.1
CMSS1-207ENST00000494412 C1QCP02747 245 aa1.94□□□□□ -2.1
CMSS1-207ENST00000494412 OGNP20774 298 aaKnown RBP1.94□□□□□ -2.1
CMSS1-207ENST00000494412 FKBP2P26885 142 aaKnown RBP1.94□□□□□ -2.1
CMSS1-207ENST00000494412 UBE2BP63146 152 aa1.94□□□□□ -2.1
CMSS1-207ENST00000494412 LTC4SQ16873 150 aa1.94□□□□□ -2.1
CMSS1-207ENST00000494412 PP632Q6XCG6 107 aa1.94□□□□□ -2.1
CMSS1-207ENST00000494412 LINC00471Q8N535 108 aa1.94□□□□□ -2.1
CMSS1-207ENST00000494412 OR13D1Q8NGV5 346 aa1.94□□□□□ -2.1
CMSS1-207ENST00000494412 RNASE11Q8TAA1 199 aaKnown RBP1.94□□□□□ -2.1
CMSS1-207ENST00000494412 GRPEL2Q8TAA5 225 aa1.94□□□□□ -2.1
CMSS1-207ENST00000494412 SPACA4Q8TDM5 124 aa1.94□□□□□ -2.1
CMSS1-207ENST00000494412 PLEKHB2Q96CS7 222 aa1.94□□□□□ -2.1
CMSS1-207ENST00000494412 YPEL2Q96QA6 119 aa1.94□□□□□ -2.1
CMSS1-207ENST00000494412 PRADC1Q9BSG0 188 aa1.94□□□□□ -2.1
CMSS1-207ENST00000494412 WDFY3Q8IZQ1 3526 aa1.94□□□□□ -2.1
CMSS1-207ENST00000494412 DUOX1Q9NRD9 1551 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 ICE1Q9Y2F5 2266 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 MGAMO43451 1857 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 SCN8AQ9UQD0 1980 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 TRGV10A0A0A0MS01 117 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 C7orf71A4D174 169 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 H3BQV1 296 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 TMEM256-PLSCR3K7ERE1 68 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 OR2T1O43869 369 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 PFDN1O60925 122 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 GGCTO75223 188 aaKnown RBP1.93□□□□□ -2.1
CMSS1-207ENST00000494412 PRB1P04280 392 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 CTSDP07339 412 aaPredicted RBP1.93□□□□□ -2.1
CMSS1-207ENST00000494412 TMEM78Q5T7P6 136 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 C9orf163Q8N9P6 203 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 CANT1Q8WVQ1 401 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 MRPL32Q9BYC8 188 aaKnown RBP1.93□□□□□ -2.1
CMSS1-207ENST00000494412 YIPF3Q9GZM5 350 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 NDUFAF1Q9Y375 327 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 SPG11Q96JI7 2443 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 LRRC37AA6NMS7 1700 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 DDX60Q8IY21 1712 aaKnown RBP1.93□□□□□ -2.1
CMSS1-207ENST00000494412 COL5A1P20908 1838 aaPredicted RBP1.93□□□□□ -2.1
CMSS1-207ENST00000494412 UBR2Q8IWV8 1755 aa1.93□□□□□ -2.1
CMSS1-207ENST00000494412 GBF1Q92538 1859 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 CCDC88CQ9P219 2028 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 TRAV3A0A0B4J244 114 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 PCNX2A6NKB5 2137 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 NDUFB3O43676 98 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 MGST1P10620 155 aaKnown RBP1.92□□□□□ -2.1
CMSS1-207ENST00000494412 S100GP29377 79 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 INSL3P51460 131 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 KRTAP10-1P60331 282 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 BRMS1LQ5PSV4 323 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 C22orf39Q6P5X5 142 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 SOSTDC1Q6X4U4 206 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 CROCCP2Q86T23 111 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 PDZD9Q8IXQ8 264 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 IFT20Q8IY31 132 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 SLC30A7Q8NEW0 376 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 NUP35Q8NFH5 326 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 OR4D11Q8NGI4 311 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 OR2T10Q8NGZ9 312 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 PPTC7Q8NI37 304 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 TEX47Q8TBZ9 253 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 MBD3L1Q8WWY6 194 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 GPX7Q96SL4 187 aaPredicted RBP1.92□□□□□ -2.1
CMSS1-207ENST00000494412 NHP2Q9NX24 153 aaKnown RBP1.92□□□□□ -2.1
CMSS1-207ENST00000494412 LHFPL6Q9Y693 200 aa1.92□□□□□ -2.1
CMSS1-207ENST00000494412 NUP210LQ5VU65 1888 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 TRAV1-1A0A0B4J248 108 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 A0A1W2PRE2 83 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 TSTD3H0UI37 97 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 IFNA14P01570 189 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 TRGC2P03986 189 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 DYNLT1P63172 113 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 RHOGP84095 191 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 ZNF826PQ6ZT77 177 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 SLC50A1Q9BRV3 221 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 CCDC32Q9BV29 185 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 TMEM126AQ9H061 195 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 BCL2L10Q9HD36 194 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 TMEM106BQ9NUM4 274 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 TAS2R4Q9NYW5 299 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 OR52A1Q9UKL2 312 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 NF1P21359 2839 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 AKAP13Q12802 2813 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 EDC4Q6P2E9 1401 aaKnown RBP1.91□□□□□ -2.1
CMSS1-207ENST00000494412 CELSR3Q9NYQ7 3312 aa1.91□□□□□ -2.1
CMSS1-207ENST00000494412 MDC1Q14676 2089 aaKnown RBP1.9□□□□□ -2.1
CMSS1-207ENST00000494412 LRRK2Q5S007 2527 aa1.9□□□□□ -2.1
CMSS1-207ENST00000494412 ABCA2Q9BZC7 2435 aa1.9□□□□□ -2.1
CMSS1-207ENST00000494412 PCNX1Q96RV3 2341 aa1.9□□□□□ -2.1
CMSS1-207ENST00000494412 NBEAL1Q6ZS30 2694 aa1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms