RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 MYH13Q9UKX3 1938 aa4.15□□□□□ -1.74
SNX13-210ENST00000494402 SCN9AQ15858 1988 aa4.15□□□□□ -1.74
SNX13-210ENST00000494402 IGKV2D-26A0A0A0MRZ7 120 aa4.15□□□□□ -1.75
SNX13-210ENST00000494402 A0A1W2PRS3 328 aa4.15□□□□□ -1.75
SNX13-210ENST00000494402 ZNF705FA8MVS1 300 aaPredicted RBP4.15□□□□□ -1.75
SNX13-210ENST00000494402 TMEM262E9PQX1 116 aa4.15□□□□□ -1.75
SNX13-210ENST00000494402 RPL36A-HNRNPH2H7BZ11 118 aa4.15□□□□□ -1.75
SNX13-210ENST00000494402 IGKV3-15P01624 115 aa4.15□□□□□ -1.75
SNX13-210ENST00000494402 OR2T2Q6IF00 324 aa4.15□□□□□ -1.75
SNX13-210ENST00000494402 LINC00301Q8NCQ3 95 aa4.15□□□□□ -1.75
SNX13-210ENST00000494402 LSM10Q969L4 123 aaKnown RBP4.15□□□□□ -1.75
SNX13-210ENST00000494402 Q96M85 177 aa4.15□□□□□ -1.75
SNX13-210ENST00000494402 DPY30Q9C005 99 aa4.15□□□□□ -1.75
SNX13-210ENST00000494402 PLA2R1Q13018 1463 aa4.15□□□□□ -1.75
SNX13-210ENST00000494402 A0A0J9YX75 114 aa4.14□□□□□ -1.75
SNX13-210ENST00000494402 OOSP1A8MZH6 123 aa4.14□□□□□ -1.75
SNX13-210ENST00000494402 BAALC-AS2P0C853 105 aa4.14□□□□□ -1.75
SNX13-210ENST00000494402 EIF4EBP1Q13541 118 aaPredicted RBP4.14□□□□□ -1.75
SNX13-210ENST00000494402 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.14□□□□□ -1.75
SNX13-210ENST00000494402 Q6ZS92 163 aa4.14□□□□□ -1.75
SNX13-210ENST00000494402 VSTM2AQ8TAG5 236 aa4.14□□□□□ -1.75
SNX13-210ENST00000494402 TANC2Q9HCD6 1990 aa4.14□□□□□ -1.75
SNX13-210ENST00000494402 TCF20Q9UGU0 1960 aaKnown RBP4.14□□□□□ -1.75
SNX13-210ENST00000494402 CITO14578 2027 aa4.14□□□□□ -1.75
SNX13-210ENST00000494402 LCTP09848 1927 aa4.13□□□□□ -1.75
SNX13-210ENST00000494402 SCAF11Q99590 1463 aaKnown RBP4.13□□□□□ -1.75
SNX13-210ENST00000494402 IGKV1D-42A0A075B6H8 117 aa4.13□□□□□ -1.75
SNX13-210ENST00000494402 J3QLW9 94 aa4.13□□□□□ -1.75
SNX13-210ENST00000494402 PROSCO94903 275 aa4.13□□□□□ -1.75
SNX13-210ENST00000494402 CRPP02741 224 aa4.13□□□□□ -1.75
SNX13-210ENST00000494402 C1orf134Q5TEV5 83 aa4.13□□□□□ -1.75
SNX13-210ENST00000494402 ZNF826PQ6ZT77 177 aa4.13□□□□□ -1.75
SNX13-210ENST00000494402 AP4S1Q9Y587 144 aa4.13□□□□□ -1.75
SNX13-210ENST00000494402 SCN4AP35499 1836 aa4.13□□□□□ -1.75
SNX13-210ENST00000494402 PTPRBP23467 1997 aa4.13□□□□□ -1.75
SNX13-210ENST00000494402 FAM24AA6NFZ4 105 aa4.12□□□□□ -1.75
SNX13-210ENST00000494402 B4DSR2 109 aa4.12□□□□□ -1.75
SNX13-210ENST00000494402 GYPBP06028 91 aa4.12□□□□□ -1.75
SNX13-210ENST00000494402 LINC00032P0C843 101 aa4.12□□□□□ -1.75
SNX13-210ENST00000494402 NPC2P61916 151 aa4.12□□□□□ -1.75
SNX13-210ENST00000494402 ZNF345Q14585 488 aa4.12□□□□□ -1.75
SNX13-210ENST00000494402 TMEM136Q6ZRR5 245 aa4.12□□□□□ -1.75
SNX13-210ENST00000494402 SMIM7Q9BQ49 75 aa4.12□□□□□ -1.75
SNX13-210ENST00000494402 ZFC3H1O60293 1989 aaKnown RBP4.12□□□□□ -1.75
SNX13-210ENST00000494402 HEATR5AQ86XA9 2040 aa4.12□□□□□ -1.75
SNX13-210ENST00000494402 WDR90Q96KV7 1748 aa4.12□□□□□ -1.75
SNX13-210ENST00000494402 GLI3P10071 1580 aa4.11□□□□□ -1.75
SNX13-210ENST00000494402 PCM1Q15154 2024 aa4.11□□□□□ -1.75
SNX13-210ENST00000494402 EDF1O60869 148 aaKnown RBP4.11□□□□□ -1.75
SNX13-210ENST00000494402 SPTSSAQ969W0 71 aa4.11□□□□□ -1.75
SNX13-210ENST00000494402 MUCL1Q96DR8 90 aa4.11□□□□□ -1.75
SNX13-210ENST00000494402 RPS10P5Q9NQ39 176 aa4.11□□□□□ -1.75
SNX13-210ENST00000494402 KIAA1551Q9HCM1 1747 aa4.11□□□□□ -1.75
SNX13-210ENST00000494402 TUBGCP6Q96RT7 1819 aa4.11□□□□□ -1.75
SNX13-210ENST00000494402 MYO10Q9HD67 2058 aa4.1□□□□□ -1.75
SNX13-210ENST00000494402 BAZ1AQ9NRL2 1556 aaPredicted RBP4.1□□□□□ -1.75
SNX13-210ENST00000494402 CC2D2AQ9P2K1 1620 aa4.1□□□□□ -1.75
SNX13-210ENST00000494402 ANKRD26Q9UPS8 1709 aa4.1□□□□□ -1.75
SNX13-210ENST00000494402 LOC107984156A0A0G2JMH3 177 aa4.1□□□□□ -1.75
SNX13-210ENST00000494402 HMSDA8MTL9 139 aa4.1□□□□□ -1.75
SNX13-210ENST00000494402 E7EQL1 145 aa4.1□□□□□ -1.75
SNX13-210ENST00000494402 IL5P05113 134 aa4.1□□□□□ -1.75
SNX13-210ENST00000494402 ARL17AQ8IVW1 177 aa4.1□□□□□ -1.75
SNX13-210ENST00000494402 OR8B3Q8NGG8 313 aa4.1□□□□□ -1.75
SNX13-210ENST00000494402 C20orf166-AS1Q96NR2 134 aa4.1□□□□□ -1.75
SNX13-210ENST00000494402 TEX14Q8IWB6 1497 aa4.1□□□□□ -1.75
SNX13-210ENST00000494402 ARHGAP35Q9NRY4 1499 aa4.1□□□□□ -1.75
SNX13-210ENST00000494402 IGLV10-54A0A075B6I4 117 aa4.09□□□□□ -1.75
SNX13-210ENST00000494402 TRAV1-1A0A0B4J248 108 aa4.09□□□□□ -1.75
SNX13-210ENST00000494402 TRAV40A0A0B4J280 105 aa4.09□□□□□ -1.75
SNX13-210ENST00000494402 NDUFB6O95139 128 aa4.09□□□□□ -1.75
SNX13-210ENST00000494402 DSCR4P56555 118 aaPredicted RBP4.09□□□□□ -1.75
SNX13-210ENST00000494402 C12orf73Q69YU5 71 aa4.09□□□□□ -1.75
SNX13-210ENST00000494402 VAMP8Q9BV40 100 aa4.09□□□□□ -1.75
SNX13-210ENST00000494402 TMEM242Q9NWH2 141 aa4.09□□□□□ -1.75
SNX13-210ENST00000494402 BCORL1Q5H9F3 1711 aa4.09□□□□□ -1.76
SNX13-210ENST00000494402 ALPK3Q96L96 1907 aa4.09□□□□□ -1.76
SNX13-210ENST00000494402 E7EUB6 86 aa4.08□□□□□ -1.76
SNX13-210ENST00000494402 SNCGO76070 127 aa4.08□□□□□ -1.76
SNX13-210ENST00000494402 MIFP14174 115 aa4.08□□□□□ -1.76
SNX13-210ENST00000494402 DSCR10P59022 87 aa4.08□□□□□ -1.76
SNX13-210ENST00000494402 PYY3Q5JQD4 70 aa4.08□□□□□ -1.76
SNX13-210ENST00000494402 FP248Q71RG6 208 aaPredicted RBP4.08□□□□□ -1.76
SNX13-210ENST00000494402 ARPINQ7Z6K5 226 aa4.08□□□□□ -1.76
SNX13-210ENST00000494402 HMGN2P46Q86SG4 172 aa4.08□□□□□ -1.76
SNX13-210ENST00000494402 LCN9Q8WX39 176 aa4.08□□□□□ -1.76
SNX13-210ENST00000494402 R4GN34 69 aa4.08□□□□□ -1.76
SNX13-210ENST00000494402 PHIPQ8WWQ0 1821 aa4.07□□□□□ -1.76
SNX13-210ENST00000494402 SHANK3Q9BYB0 1731 aa4.07□□□□□ -1.76
SNX13-210ENST00000494402 IGLV3-16A0A075B6K0 115 aa4.07□□□□□ -1.76
SNX13-210ENST00000494402 A0A087WSZ3 146 aa4.07□□□□□ -1.76
SNX13-210ENST00000494402 UBL3O95164 117 aa4.07□□□□□ -1.76
SNX13-210ENST00000494402 PIPP12273 146 aaPredicted RBP4.07□□□□□ -1.76
SNX13-210ENST00000494402 KRTAP10-11P60412 298 aa4.07□□□□□ -1.76
SNX13-210ENST00000494402 LINC00269Q8N2A0 174 aa4.07□□□□□ -1.76
SNX13-210ENST00000494402 TMEM254Q8TBM7 123 aa4.07□□□□□ -1.76
SNX13-210ENST00000494402 TSKUQ8WUA8 353 aa4.07□□□□□ -1.76
SNX13-210ENST00000494402 KLK12Q9UKR0 248 aa4.07□□□□□ -1.76
SNX13-210ENST00000494402 MYH1P12882 1939 aa4.07□□□□□ -1.76
SNX13-210ENST00000494402 SLX4Q8IY92 1834 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms