RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 FAM106AQ4KMX7 169 aa13.02□□□□□ -0.33
SYP-208ENST00000494396 ZNF462Q96JM2 2506 aa13.02□□□□□ -0.33
SYP-208ENST00000494396 USP9XQ93008 2570 aaPredicted RBP13.02□□□□□ -0.33
SYP-208ENST00000494396 PPIAL4CA0A0B4J2A2 164 aa13.01□□□□□ -0.33
SYP-208ENST00000494396 H3BRN7 92 aa13.01□□□□□ -0.33
SYP-208ENST00000494396 H3BTX0 84 aa13.01□□□□□ -0.33
SYP-208ENST00000494396 CRYGBP07316 175 aa13.01□□□□□ -0.33
SYP-208ENST00000494396 EVI2AP22794 236 aa13.01□□□□□ -0.33
SYP-208ENST00000494396 LOXL1Q08397 574 aaPredicted RBP13.01□□□□□ -0.33
SYP-208ENST00000494396 MRPL51Q4U2R6 128 aaKnown RBP13.01□□□□□ -0.33
SYP-208ENST00000494396 LYZL1Q6UWQ5 148 aa13.01□□□□□ -0.33
SYP-208ENST00000494396 BCL6BQ8N143 479 aaPredicted RBP13.01□□□□□ -0.33
SYP-208ENST00000494396 NAV3Q8IVL0 2385 aa13.01□□□□□ -0.33
SYP-208ENST00000494396 LOC389332A0A1B0GUA5 103 aa13.01□□□□□ -0.33
SYP-208ENST00000494396 TEX48A0A1B0GUV7 120 aa13.01□□□□□ -0.33
SYP-208ENST00000494396 CRIP1P50238 77 aa13.01□□□□□ -0.33
SYP-208ENST00000494396 PCP2Q8IVA1 136 aa13.01□□□□□ -0.33
SYP-208ENST00000494396 ZNF843Q8N446 348 aa13.01□□□□□ -0.33
SYP-208ENST00000494396 NXT2Q9NPJ8 142 aaKnown RBP13.01□□□□□ -0.33
SYP-208ENST00000494396 CKS2P33552 79 aa13□□□□□ -0.33
SYP-208ENST00000494396 SPATA25Q9BR10 227 aa13□□□□□ -0.33
SYP-208ENST00000494396 AAMDCQ9H7C9 122 aa13□□□□□ -0.33
SYP-208ENST00000494396 ATP5LO75964 103 aa13□□□□□ -0.33
SYP-208ENST00000494396 AZU1P20160 251 aa13□□□□□ -0.33
SYP-208ENST00000494396 EFNA4P52798 201 aa13□□□□□ -0.33
SYP-208ENST00000494396 PRSS57Q6UWY2 283 aa13□□□□□ -0.33
SYP-208ENST00000494396 AMN1Q8IY45 258 aa13□□□□□ -0.33
SYP-208ENST00000494396 PHLDA1Q8WV24 401 aaPredicted RBP13□□□□□ -0.33
SYP-208ENST00000494396 CHAC1Q9BUX1 264 aa13□□□□□ -0.33
SYP-208ENST00000494396 MAP1LC3AQ9H492 121 aa13□□□□□ -0.33
SYP-208ENST00000494396 E9PLD3 99 aa12.99□□□□□ -0.33
SYP-208ENST00000494396 RBP4P02753 201 aa12.99□□□□□ -0.33
SYP-208ENST00000494396 GCSHP23434 173 aa12.99□□□□□ -0.33
SYP-208ENST00000494396 FCER1GP30273 86 aa12.99□□□□□ -0.33
SYP-208ENST00000494396 RUSC1-AS1Q66K80 236 aa12.99□□□□□ -0.33
SYP-208ENST00000494396 NAA38Q9BRA0 125 aaKnown RBP12.99□□□□□ -0.33
SYP-208ENST00000494396 TPPP3Q9BW30 176 aa12.99□□□□□ -0.33
SYP-208ENST00000494396 TPSG1Q9NRR2 321 aa12.99□□□□□ -0.33
SYP-208ENST00000494396 SIGLEC9Q9Y336 463 aa12.99□□□□□ -0.33
SYP-208ENST00000494396 I3L2K1 104 aa12.98□□□□□ -0.33
SYP-208ENST00000494396 RNF5Q99942 180 aa12.98□□□□□ -0.33
SYP-208ENST00000494396 GAGE12HA6NDE8 117 aa12.98□□□□□ -0.33
SYP-208ENST00000494396 CEND1Q8N111 149 aa12.98□□□□□ -0.33
SYP-208ENST00000494396 HHLA3Q9XRX5 114 aa12.98□□□□□ -0.33
SYP-208ENST00000494396 WI2-2373I1.2A0A1W2PRP0 233 aa12.97□□□□□ -0.33
SYP-208ENST00000494396 GNG7O60262 68 aa12.97□□□□□ -0.33
SYP-208ENST00000494396 IGKCP01834 107 aa12.97□□□□□ -0.33
SYP-208ENST00000494396 FCGR2BP31994 310 aaPredicted RBP12.97□□□□□ -0.33
SYP-208ENST00000494396 ODF1Q14990 250 aa12.97□□□□□ -0.33
SYP-208ENST00000494396 PPP1R27Q86WC6 154 aa12.97□□□□□ -0.33
SYP-208ENST00000494396 LY6G5BQ8NDX9 201 aa12.97□□□□□ -0.33
SYP-208ENST00000494396 COL12A1Q99715 3063 aa12.97□□□□□ -0.33
SYP-208ENST00000494396 TMEM213A2RRL7 107 aa12.97□□□□□ -0.33
SYP-208ENST00000494396 TEX22C9J3V5 150 aa12.97□□□□□ -0.33
SYP-208ENST00000494396 MRPS12O15235 138 aaKnown RBP12.97□□□□□ -0.33
SYP-208ENST00000494396 IGKV1-17P01599 117 aa12.97□□□□□ -0.33
SYP-208ENST00000494396 IGLV1-47P01700 117 aa12.97□□□□□ -0.33
SYP-208ENST00000494396 FXYD2P54710 66 aa12.97□□□□□ -0.33
SYP-208ENST00000494396 DLX1P56177 255 aa12.97□□□□□ -0.33
SYP-208ENST00000494396 ZNF502Q8TBZ5 544 aa12.97□□□□□ -0.33
SYP-208ENST00000494396 ATP6V0BQ99437 205 aa12.97□□□□□ -0.33
SYP-208ENST00000494396 CNFNQ9BYD5 112 aa12.97□□□□□ -0.33
SYP-208ENST00000494396 SPANXB1Q9NS25 103 aaPredicted RBP12.97□□□□□ -0.33
SYP-208ENST00000494396 ENSAO43768 121 aaKnown RBP12.96□□□□□ -0.33
SYP-208ENST00000494396 NPYP01303 97 aa12.96□□□□□ -0.33
SYP-208ENST00000494396 TWIST1Q15672 202 aa12.96□□□□□ -0.33
SYP-208ENST00000494396 ZNF562Q6V9R5 426 aa12.96□□□□□ -0.33
SYP-208ENST00000494396 MTURNQ8N3F0 131 aa12.96□□□□□ -0.33
SYP-208ENST00000494396 ONECUT1Q9UBC0 465 aa12.96□□□□□ -0.33
SYP-208ENST00000494396 DKK2Q9UBU2 259 aa12.96□□□□□ -0.33
SYP-208ENST00000494396 TRBV25-1A0A075B6N4 114 aa12.95□□□□□ -0.34
SYP-208ENST00000494396 A0A1W2PRD5 423 aa12.95□□□□□ -0.34
SYP-208ENST00000494396 A0A1W2PRF3 423 aa12.95□□□□□ -0.34
SYP-208ENST00000494396 A0A1W2PRM7 423 aa12.95□□□□□ -0.34
SYP-208ENST00000494396 LINC01619G3V211 115 aa12.95□□□□□ -0.34
SYP-208ENST00000494396 SH2D1AO60880 128 aa12.95□□□□□ -0.34
SYP-208ENST00000494396 DPM2O94777 84 aa12.95□□□□□ -0.34
SYP-208ENST00000494396 TCTEX1D4Q5JR98 221 aa12.95□□□□□ -0.34
SYP-208ENST00000494396 KLF17Q5JT82 389 aaPredicted RBP12.95□□□□□ -0.34
SYP-208ENST00000494396 IGLC6P0CF74 106 aa12.95□□□□□ -0.34
SYP-208ENST00000494396 PRB3Q04118 309 aaPredicted RBP12.95□□□□□ -0.34
SYP-208ENST00000494396 RNF125Q96EQ8 232 aa12.95□□□□□ -0.34
SYP-208ENST00000494396 BUB1B-PAK6H3BSN5 160 aa12.94□□□□□ -0.34
SYP-208ENST00000494396 AKAP6Q13023 2319 aa12.94□□□□□ -0.34
SYP-208ENST00000494396 ZNF491Q8N8L2 437 aa12.93□□□□□ -0.34
SYP-208ENST00000494396 ARPC1AQ92747 370 aa12.93□□□□□ -0.34
SYP-208ENST00000494396 GTSF1LQ9H1H1 148 aa12.93□□□□□ -0.34
SYP-208ENST00000494396 UBR5O95071 2799 aaPredicted RBP12.93□□□□□ -0.34
SYP-208ENST00000494396 IGHV3-72A0A0B4J1Y9 119 aa12.93□□□□□ -0.34
SYP-208ENST00000494396 IGLL5B9A064 214 aa12.93□□□□□ -0.34
SYP-208ENST00000494396 COX7A1P24310 79 aa12.93□□□□□ -0.34
SYP-208ENST00000494396 ZNF48Q96MX3 618 aaPredicted RBP12.93□□□□□ -0.34
SYP-208ENST00000494396 C8orf49Q96NF6 230 aa12.93□□□□□ -0.34
SYP-208ENST00000494396 PRSS1P07477 247 aa12.92□□□□□ -0.34
SYP-208ENST00000494396 ZNF479Q96JC4 524 aa12.92□□□□□ -0.34
SYP-208ENST00000494396 TSSC4Q9Y5U2 329 aaPredicted RBP12.92□□□□□ -0.34
SYP-208ENST00000494396 IGHV1-3A0A0C4DH29 117 aa12.92□□□□□ -0.34
SYP-208ENST00000494396 M0R1W7 72 aa12.92□□□□□ -0.34
SYP-208ENST00000494396 LEPP41159 167 aa12.92□□□□□ -0.34
SYP-208ENST00000494396 SMAGPQ0VAQ4 97 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms