RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 SH3BGRL3Q9H299 93 aa6.28□□□□□ -1.4
ITGB1-217ENST00000494395 CYTL1Q9NRR1 136 aa6.28□□□□□ -1.4
ITGB1-217ENST00000494395 TRAV12-2A0A075B6T6 113 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 IGHV3OR16-12A0A075B7B8 117 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 LCE6AA0A183 80 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 CXorf65A6NEN9 183 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 NUPR2A6NF83 97 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 HMSDA8MTL9 139 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 ARPC5O15511 151 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 INSP01308 110 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 STAG3L2P0CL84 134 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 STAG3L3P0CL85 134 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 CT45A10P0DMU9 189 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 CDKN1BP46527 198 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 TAS2R45P59539 299 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 UBE2L3P68036 154 aaKnown RBP6.27□□□□□ -1.41
ITGB1-217ENST00000494395 ZNF345Q14585 488 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 FAM122CQ6P4D5 195 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 CEMP1Q6PRD7 247 aaPredicted RBP6.27□□□□□ -1.41
ITGB1-217ENST00000494395 PQLC2Q6ZP29 291 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 LYPD1Q8N2G4 141 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 OR10G4Q8NGN3 311 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 OR10G9Q8NGN4 311 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 OR10G7Q8NGN6 311 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 SUN5Q8TC36 379 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 PHLDA1Q8WV24 401 aaPredicted RBP6.27□□□□□ -1.41
ITGB1-217ENST00000494395 ST6GAL2Q96JF0 529 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 GOLT1BQ9Y3E0 138 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 ALMS1Q8TCU4 4167 aa6.27□□□□□ -1.41
ITGB1-217ENST00000494395 IGKV2-40A0A087WW87 121 aaPredicted RBP6.26□□□□□ -1.41
ITGB1-217ENST00000494395 BORCS7-ASMTA0A0B4J1R7 106 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 PLAC8L1A1L4L8 177 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 TMEM189A5PLL7 270 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 TAAR5O14804 337 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 IGKV2D-40P01614 121 aaPredicted RBP6.26□□□□□ -1.41
ITGB1-217ENST00000494395 PRM2P04554 102 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 ARL14EPLP0DKL9 152 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 TSPOP30536 169 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 CDC34P49427 236 aaPredicted RBP6.26□□□□□ -1.41
ITGB1-217ENST00000494395 ERCC8Q13216 396 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 ZNF726P1Q15940 193 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 GFI1BQ5VTD9 330 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 C9orf47Q6ZRZ4 202 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 SSX7Q7RTT5 188 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 TMEM256Q8N2U0 113 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 KCNRGQ8N5I3 272 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 GNPNAT1Q96EK6 184 aaPredicted RBP6.26□□□□□ -1.41
ITGB1-217ENST00000494395 C20orf144Q9BQM9 153 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 AGPAT4-IT1Q9H0P7 198 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 Q9H3A6 140 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 AAMDCQ9H7C9 122 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 DNAH1Q9P2D7 4330 aa6.26□□□□□ -1.41
ITGB1-217ENST00000494395 SACSQ9NZJ4 4579 aa6.25□□□□□ -1.41
ITGB1-217ENST00000494395 LOC102723971A0A1B0GUV8 181 aa6.25□□□□□ -1.41
ITGB1-217ENST00000494395 A0A1W2PPV4 95 aa6.25□□□□□ -1.41
ITGB1-217ENST00000494395 RBAKDNA6NC62 111 aa6.25□□□□□ -1.41
ITGB1-217ENST00000494395 ZNF705GA8MUZ8 300 aaPredicted RBP6.25□□□□□ -1.41
ITGB1-217ENST00000494395 KLLNB2CW77 178 aa6.25□□□□□ -1.41
ITGB1-217ENST00000494395 HMGB3O15347 200 aaKnown RBP6.25□□□□□ -1.41
ITGB1-217ENST00000494395 JTBO76095 146 aa6.25□□□□□ -1.41
ITGB1-217ENST00000494395 HBE1P02100 147 aa6.25□□□□□ -1.41
ITGB1-217ENST00000494395 MBP02144 154 aa6.25□□□□□ -1.41
ITGB1-217ENST00000494395 CRISP2P16562 243 aa6.25□□□□□ -1.41
ITGB1-217ENST00000494395 AZU1P20160 251 aa6.25□□□□□ -1.41
ITGB1-217ENST00000494395 PTTG1IPP53801 180 aa6.25□□□□□ -1.41
ITGB1-217ENST00000494395 RANP62826 216 aaKnown RBP6.25□□□□□ -1.41
ITGB1-217ENST00000494395 RRN3P1Q2M238 152 aa6.25□□□□□ -1.41
ITGB1-217ENST00000494395 C12orf74Q32Q52 190 aa6.25□□□□□ -1.41
ITGB1-217ENST00000494395 Q6ZTC4 211 aa6.25□□□□□ -1.41
ITGB1-217ENST00000494395 ZFAND2AQ8N6M9 145 aa6.25□□□□□ -1.41
ITGB1-217ENST00000494395 LINC00477Q96M19 166 aa6.25□□□□□ -1.41
ITGB1-217ENST00000494395 VGLL1Q99990 258 aa6.25□□□□□ -1.41
ITGB1-217ENST00000494395 DKK2Q9UBU2 259 aa6.25□□□□□ -1.41
ITGB1-217ENST00000494395 ZNF324O75467 553 aaPredicted RBP6.24□□□□□ -1.41
ITGB1-217ENST00000494395 SLC25A5P05141 298 aaKnown RBP6.24□□□□□ -1.41
ITGB1-217ENST00000494395 GCSHP23434 173 aa6.24□□□□□ -1.41
ITGB1-217ENST00000494395 GCHFRP30047 84 aa6.24□□□□□ -1.41
ITGB1-217ENST00000494395 LEPP41159 167 aa6.24□□□□□ -1.41
ITGB1-217ENST00000494395 TAS2R60P59551 318 aa6.24□□□□□ -1.41
ITGB1-217ENST00000494395 PLECQ15149 4684 aaKnown RBP6.24□□□□□ -1.41
ITGB1-217ENST00000494395 PRR9Q5T870 116 aa6.24□□□□□ -1.41
ITGB1-217ENST00000494395 FAM222AQ5U5X8 452 aa6.24□□□□□ -1.41
ITGB1-217ENST00000494395 Q6ZSN1 163 aa6.24□□□□□ -1.41
ITGB1-217ENST00000494395 TCTE3Q8IZS6 198 aa6.24□□□□□ -1.41
ITGB1-217ENST00000494395 ARL6IP6Q8N6S5 226 aa6.24□□□□□ -1.41
ITGB1-217ENST00000494395 RNASE8Q8TDE3 154 aaKnown RBP6.24□□□□□ -1.41
ITGB1-217ENST00000494395 OTORQ9NRC9 128 aa6.24□□□□□ -1.41
ITGB1-217ENST00000494395 PPP1R14DQ9NXH3 145 aa6.24□□□□□ -1.41
ITGB1-217ENST00000494395 YTHDF2Q9Y5A9 579 aaKnown RBP6.24□□□□□ -1.41
ITGB1-217ENST00000494395 A0A087WWL8 130 aa6.23□□□□□ -1.41
ITGB1-217ENST00000494395 A0A0D9SG52 128 aa6.23□□□□□ -1.41
ITGB1-217ENST00000494395 TRBV7-9A0A0J9YWB2 115 aa6.23□□□□□ -1.41
ITGB1-217ENST00000494395 TEX48A0A1B0GUV7 120 aa6.23□□□□□ -1.41
ITGB1-217ENST00000494395 PGPA6NDG6 321 aa6.23□□□□□ -1.41
ITGB1-217ENST00000494395 DIRC3C9JPN6 131 aa6.23□□□□□ -1.41
ITGB1-217ENST00000494395 C11orf94C9JXX5 98 aa6.23□□□□□ -1.41
ITGB1-217ENST00000494395 H7BYZ3 331 aa6.23□□□□□ -1.41
ITGB1-217ENST00000494395 NMBP08949 121 aa6.23□□□□□ -1.41
ITGB1-217ENST00000494395 SPART-AS1P0CW21 52 aa6.23□□□□□ -1.41
ITGB1-217ENST00000494395 ZNF767PQ75MW2 155 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms