RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 LAMTOR2Q9Y2Q5 125 aa9.3□□□□□ -0.92
COL25A1-204ENST00000494183 VCYO14598 125 aa9.29□□□□□ -0.92
COL25A1-204ENST00000494183 C1orf159Q96HA4 380 aa9.29□□□□□ -0.92
COL25A1-204ENST00000494183 A0A1B0GV90 55 aa9.29□□□□□ -0.92
COL25A1-204ENST00000494183 IGKCP01834 107 aa9.29□□□□□ -0.92
COL25A1-204ENST00000494183 TYMSP04818 313 aa9.29□□□□□ -0.92
COL25A1-204ENST00000494183 FNDC4Q9H6D8 234 aaPredicted RBP9.29□□□□□ -0.92
COL25A1-204ENST00000494183 NHP2Q9NX24 153 aaKnown RBP9.29□□□□□ -0.92
COL25A1-204ENST00000494183 LSM4Q9Y4Z0 139 aaKnown RBP9.29□□□□□ -0.92
COL25A1-204ENST00000494183 GGTLC3B5MD39 225 aa9.29□□□□□ -0.92
COL25A1-204ENST00000494183 C8orf86Q6ZUL3 223 aa9.29□□□□□ -0.92
COL25A1-204ENST00000494183 ZNF815PA8K554 130 aa9.28□□□□□ -0.92
COL25A1-204ENST00000494183 NDUFA4O00483 81 aa9.28□□□□□ -0.92
COL25A1-204ENST00000494183 PHLDA1Q8WV24 401 aaPredicted RBP9.28□□□□□ -0.92
COL25A1-204ENST00000494183 CSTL1Q9H114 145 aa9.28□□□□□ -0.92
COL25A1-204ENST00000494183 PLXNB1O43157 2135 aa9.28□□□□□ -0.92
COL25A1-204ENST00000494183 LOC105371267A0A1B0GV96 52 aa9.28□□□□□ -0.92
COL25A1-204ENST00000494183 UBE2CO00762 179 aa9.28□□□□□ -0.92
COL25A1-204ENST00000494183 ZNF726P1Q15940 193 aa9.28□□□□□ -0.92
COL25A1-204ENST00000494183 C1orf194Q5T5A4 169 aa9.28□□□□□ -0.92
COL25A1-204ENST00000494183 IGHV4-39P01824 125 aa9.28□□□□□ -0.92
COL25A1-204ENST00000494183 MS4A6AQ9H2W1 248 aa9.28□□□□□ -0.92
COL25A1-204ENST00000494183 TRAV2A0A0B4J234 112 aa9.27□□□□□ -0.92
COL25A1-204ENST00000494183 LINC01549A6NIU2 74 aa9.27□□□□□ -0.92
COL25A1-204ENST00000494183 SCGB1A1P11684 91 aa9.27□□□□□ -0.92
COL25A1-204ENST00000494183 Q8NA96 180 aa9.27□□□□□ -0.92
COL25A1-204ENST00000494183 PCNX3Q9H6A9 2034 aa9.27□□□□□ -0.93
COL25A1-204ENST00000494183 TMEM213A2RRL7 107 aa9.27□□□□□ -0.93
COL25A1-204ENST00000494183 PLNP26678 52 aa9.27□□□□□ -0.93
COL25A1-204ENST00000494183 VGLL1Q99990 258 aa9.27□□□□□ -0.93
COL25A1-204ENST00000494183 IGLC7A0M8Q6 106 aa9.27□□□□□ -0.93
COL25A1-204ENST00000494183 PFN1P07737 140 aaKnown RBP9.27□□□□□ -0.93
COL25A1-204ENST00000494183 C8orf49Q96NF6 230 aa9.27□□□□□ -0.93
COL25A1-204ENST00000494183 SLC25A2Q9BXI2 301 aa9.27□□□□□ -0.93
COL25A1-204ENST00000494183 ELANEP08246 267 aa9.26□□□□□ -0.93
COL25A1-204ENST00000494183 HOXB4P17483 251 aaPredicted RBP9.26□□□□□ -0.93
COL25A1-204ENST00000494183 TDGF1P3P51864 188 aa9.26□□□□□ -0.93
COL25A1-204ENST00000494183 DEFB113Q30KQ7 82 aa9.26□□□□□ -0.93
COL25A1-204ENST00000494183 TMEM158Q8WZ71 300 aa9.26□□□□□ -0.93
COL25A1-204ENST00000494183 KLK9Q9UKQ9 250 aa9.26□□□□□ -0.93
COL25A1-204ENST00000494183 CENPVL3A0A0U1RRI6 287 aa9.26□□□□□ -0.93
COL25A1-204ENST00000494183 IL15RAQ13261 267 aa9.26□□□□□ -0.93
COL25A1-204ENST00000494183 ZNF491Q8N8L2 437 aa9.26□□□□□ -0.93
COL25A1-204ENST00000494183 OR5A1Q8NGJ0 315 aa9.26□□□□□ -0.93
COL25A1-204ENST00000494183 MED12LQ86YW9 2145 aa9.26□□□□□ -0.93
COL25A1-204ENST00000494183 TRAV12-2A0A075B6T6 113 aa9.26□□□□□ -0.93
COL25A1-204ENST00000494183 OR11H6Q8NGC7 330 aa9.26□□□□□ -0.93
COL25A1-204ENST00000494183 PRR25Q96S07 402 aa9.26□□□□□ -0.93
COL25A1-204ENST00000494183 NDUFAF3Q9BU61 184 aa9.26□□□□□ -0.93
COL25A1-204ENST00000494183 LRRK2Q5S007 2527 aa9.26□□□□□ -0.93
COL25A1-204ENST00000494183 A0A1B0GWB2 263 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 LINC00587B1AMM8 73 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 BLCAPP62952 87 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 H3BUT2 72 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 IGHV4-38-2P0DP08 117 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 TMEM95Q3KNT9 176 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 MCRIP2Q9BUT9 160 aaKnown RBP9.25□□□□□ -0.93
COL25A1-204ENST00000494183 FN1P02751 2386 aaKnown RBP9.25□□□□□ -0.93
COL25A1-204ENST00000494183 TRAV13-1A0A0B4J241 112 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 KRTAP27-1Q3LI81 207 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 LYPD6Q86Y78 171 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 VPREB3Q9UKI3 123 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 C3orf79P0CE67 100 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 LINC00158P58513 81 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 CFHR3Q02985 330 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 MSMPQ1L6U9 139 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 TEX43Q6ZNM6 134 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 C8orf31Q8N9H6 132 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 TMEM75Q8N9X5 138 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 OR2K2Q8NGT1 345 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 MRPL27Q9P0M9 148 aaKnown RBP9.25□□□□□ -0.93
COL25A1-204ENST00000494183 SMPXQ9UHP9 88 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 SPCS1Q9Y6A9 102 aa9.25□□□□□ -0.93
COL25A1-204ENST00000494183 LTBP2Q14767 1821 aa9.24□□□□□ -0.93
COL25A1-204ENST00000494183 H3BRN7 92 aa9.24□□□□□ -0.93
COL25A1-204ENST00000494183 Q6ZSR3 168 aa9.24□□□□□ -0.93
COL25A1-204ENST00000494183 UBE2DNLQ8IWF7 75 aa9.24□□□□□ -0.93
COL25A1-204ENST00000494183 CHD3Q12873 2000 aaKnown RBP9.24□□□□□ -0.93
COL25A1-204ENST00000494183 C11orf68Q9H3H3 251 aaKnown RBP9.24□□□□□ -0.93
COL25A1-204ENST00000494183 PRR20EP86478 221 aa9.24□□□□□ -0.93
COL25A1-204ENST00000494183 PRR20CP86479 221 aa9.24□□□□□ -0.93
COL25A1-204ENST00000494183 PRR20DP86480 221 aa9.24□□□□□ -0.93
COL25A1-204ENST00000494183 PRR20BP86481 221 aa9.24□□□□□ -0.93
COL25A1-204ENST00000494183 PRR20AP86496 221 aa9.24□□□□□ -0.93
COL25A1-204ENST00000494183 IGHV3-16A0A0C4DH30 117 aa9.24□□□□□ -0.93
COL25A1-204ENST00000494183 ZC2HC1BQ5TFG8 222 aa9.24□□□□□ -0.93
COL25A1-204ENST00000494183 SPOCK3Q9BQ16 436 aa9.24□□□□□ -0.93
COL25A1-204ENST00000494183 RBMY1BA6NDE4 496 aaKnown RBP9.23□□□□□ -0.93
COL25A1-204ENST00000494183 RBMY1EA6NEQ0 496 aaKnown RBP9.23□□□□□ -0.93
COL25A1-204ENST00000494183 TNFRSF6BO95407 300 aa9.23□□□□□ -0.93
COL25A1-204ENST00000494183 RBMY1DP0C7P1 496 aaKnown RBP9.23□□□□□ -0.93
COL25A1-204ENST00000494183 RBMY1A1P0DJD3 496 aaKnown RBP9.23□□□□□ -0.93
COL25A1-204ENST00000494183 RBMY1CP0DJD4 496 aa9.23□□□□□ -0.93
COL25A1-204ENST00000494183 CDKN1BP46527 198 aa9.23□□□□□ -0.93
COL25A1-204ENST00000494183 CKS1BP61024 79 aa9.23□□□□□ -0.93
COL25A1-204ENST00000494183 SSBP2P81877 361 aaPredicted RBP9.23□□□□□ -0.93
COL25A1-204ENST00000494183 C5orf30Q96GV9 206 aa9.23□□□□□ -0.93
COL25A1-204ENST00000494183 ZNF114Q8NC26 417 aa9.23□□□□□ -0.93
COL25A1-204ENST00000494183 C10orf105Q8TEF2 133 aa9.23□□□□□ -0.93
COL25A1-204ENST00000494183 KLF2Q9Y5W3 355 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms