RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 NUPR1O60356 82 aa8.11□□□□□ -1.11
CLCN6-208ENST00000494028 SERF1AO75920 110 aa8.11□□□□□ -1.11
CLCN6-208ENST00000494028 APCSP02743 223 aa8.11□□□□□ -1.11
CLCN6-208ENST00000494028 RPLP1P05386 114 aaKnown RBP8.11□□□□□ -1.11
CLCN6-208ENST00000494028 LGALS1P09382 135 aaKnown RBP8.11□□□□□ -1.11
CLCN6-208ENST00000494028 EDN2P20800 178 aa8.11□□□□□ -1.11
CLCN6-208ENST00000494028 SRIP30626 198 aa8.11□□□□□ -1.11
CLCN6-208ENST00000494028 ZNF80P51504 273 aaPredicted RBP8.11□□□□□ -1.11
CLCN6-208ENST00000494028 Q0VG73 95 aa8.11□□□□□ -1.11
CLCN6-208ENST00000494028 FOXE3Q13461 319 aa8.11□□□□□ -1.11
CLCN6-208ENST00000494028 SAPCD1Q5SSQ6 148 aa8.11□□□□□ -1.11
CLCN6-208ENST00000494028 GATD1Q8NB37 220 aa8.11□□□□□ -1.11
CLCN6-208ENST00000494028 C20orf173Q96LM9 149 aa8.11□□□□□ -1.11
CLCN6-208ENST00000494028 NDFIP1Q9BT67 221 aa8.11□□□□□ -1.11
CLCN6-208ENST00000494028 NOTCH2Q04721 2471 aa8.1□□□□□ -1.11
CLCN6-208ENST00000494028 ITPR3Q14573 2671 aa8.1□□□□□ -1.11
CLCN6-208ENST00000494028 ELANEP08246 267 aa8.1□□□□□ -1.11
CLCN6-208ENST00000494028 ARMS2P0C7Q2 107 aa8.1□□□□□ -1.11
CLCN6-208ENST00000494028 CAMPP49913 170 aa8.1□□□□□ -1.11
CLCN6-208ENST00000494028 FOXA3P55318 350 aaPredicted RBP8.1□□□□□ -1.11
CLCN6-208ENST00000494028 OR10J3Q5JRS4 329 aa8.1□□□□□ -1.11
CLCN6-208ENST00000494028 DNLZQ5SXM8 178 aa8.1□□□□□ -1.11
CLCN6-208ENST00000494028 FAM162BQ5T6X4 162 aa8.1□□□□□ -1.11
CLCN6-208ENST00000494028 Q6AWC8 147 aa8.1□□□□□ -1.11
CLCN6-208ENST00000494028 RNF152Q8N8N0 203 aa8.1□□□□□ -1.11
CLCN6-208ENST00000494028 TMEM18Q96B42 140 aa8.1□□□□□ -1.11
CLCN6-208ENST00000494028 SSBP4Q9BWG4 385 aaPredicted RBP8.1□□□□□ -1.11
CLCN6-208ENST00000494028 NIT2Q9NQR4 276 aa8.1□□□□□ -1.11
CLCN6-208ENST00000494028 DAZ1Q9NQZ3 744 aaKnown RBP8.1□□□□□ -1.11
CLCN6-208ENST00000494028 CLEC5AQ9NY25 188 aa8.1□□□□□ -1.11
CLCN6-208ENST00000494028 CSMD1Q96PZ7 3565 aa8.1□□□□□ -1.11
CLCN6-208ENST00000494028 CCDC168Q8NDH2 2452 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 VPS13CQ709C8 3753 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 A0A1W2PS18 150 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 TMEM213A2RRL7 107 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 A8MWP6 167 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 K7EMT4 169 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 HAX1O00165 279 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 CTRLP40313 264 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 SRSF2Q01130 221 aaKnown RBP8.09□□□□□ -1.11
CLCN6-208ENST00000494028 IQCJQ1A5X6 159 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 TM4SF20Q53R12 229 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 PRR31Q5SQ13 230 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 REC114Q7Z4M0 266 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 TMEM86BQ8N661 226 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 TEX29Q8N6K0 151 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 ZNF738Q8NE65 137 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 KCNS1Q96KK3 526 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 C16orf92Q96LL3 132 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 RCHY1Q96PM5 261 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 FOXC2Q99958 501 aa8.09□□□□□ -1.11
CLCN6-208ENST00000494028 IGHV4OR15-8A0A075B7B6 117 aa8.08□□□□□ -1.12
CLCN6-208ENST00000494028 A0A087WW49 117 aa8.08□□□□□ -1.12
CLCN6-208ENST00000494028 A0A1B0GUT8 65 aa8.08□□□□□ -1.12
CLCN6-208ENST00000494028 TMEM189A5PLL7 270 aa8.08□□□□□ -1.12
CLCN6-208ENST00000494028 FAM181BA6NEQ2 426 aa8.08□□□□□ -1.12
CLCN6-208ENST00000494028 DNAJC9-AS1A6NH13 148 aa8.08□□□□□ -1.12
CLCN6-208ENST00000494028 ZNF138P52744 262 aa8.08□□□□□ -1.12
CLCN6-208ENST00000494028 KLF5Q13887 457 aaPredicted RBP8.08□□□□□ -1.12
CLCN6-208ENST00000494028 C9orf47Q6ZRZ4 202 aa8.08□□□□□ -1.12
CLCN6-208ENST00000494028 C18orf32Q8TCD1 76 aa8.08□□□□□ -1.12
CLCN6-208ENST00000494028 DUX5Q96PT3 197 aa8.08□□□□□ -1.12
CLCN6-208ENST00000494028 RHPN1-AS1Q9BWJ2 59 aa8.08□□□□□ -1.12
CLCN6-208ENST00000494028 AGPAT4-IT1Q9H0P7 198 aa8.08□□□□□ -1.12
CLCN6-208ENST00000494028 NRN1Q9NPD7 142 aa8.08□□□□□ -1.12
CLCN6-208ENST00000494028 SMPXQ9UHP9 88 aa8.08□□□□□ -1.12
CLCN6-208ENST00000494028 AKAP9Q99996 3911 aa8.08□□□□□ -1.12
CLCN6-208ENST00000494028 TMSB15BA0A087X1C1 80 aa8.07□□□□□ -1.12
CLCN6-208ENST00000494028 PCP4L1A6NKN8 68 aa8.07□□□□□ -1.12
CLCN6-208ENST00000494028 CD5LO43866 347 aa8.07□□□□□ -1.12
CLCN6-208ENST00000494028 IGLC6P0CF74 106 aa8.07□□□□□ -1.12
CLCN6-208ENST00000494028 BMI1P35226 326 aa8.07□□□□□ -1.12
CLCN6-208ENST00000494028 RPS20P60866 119 aaKnown RBP8.07□□□□□ -1.12
CLCN6-208ENST00000494028 RIGQ13278 110 aa8.07□□□□□ -1.12
CLCN6-208ENST00000494028 JOSD1Q15040 202 aaPredicted RBP8.07□□□□□ -1.12
CLCN6-208ENST00000494028 LINC01559Q495D7 138 aa8.07□□□□□ -1.12
CLCN6-208ENST00000494028 BAGE3Q86Y29 109 aa8.07□□□□□ -1.12
CLCN6-208ENST00000494028 ALKBH7Q9BT30 221 aaPredicted RBP8.07□□□□□ -1.12
CLCN6-208ENST00000494028 PPP1R14DQ9NXH3 145 aa8.07□□□□□ -1.12
CLCN6-208ENST00000494028 UFC1Q9Y3C8 167 aa8.07□□□□□ -1.12
CLCN6-208ENST00000494028 OTOGQ6ZRI0 2925 aa8.07□□□□□ -1.12
CLCN6-208ENST00000494028 A0A1B0GW15 77 aa8.06□□□□□ -1.12
CLCN6-208ENST00000494028 S100A12P80511 92 aa8.06□□□□□ -1.12
CLCN6-208ENST00000494028 FAM106AQ4KMX7 169 aa8.06□□□□□ -1.12
CLCN6-208ENST00000494028 TMEM78Q5T7P6 136 aa8.06□□□□□ -1.12
CLCN6-208ENST00000494028 PRR9Q5T870 116 aa8.06□□□□□ -1.12
CLCN6-208ENST00000494028 UBE2E2Q96LR5 201 aa8.06□□□□□ -1.12
CLCN6-208ENST00000494028 MYO9AB2RTY4 2548 aa8.06□□□□□ -1.12
CLCN6-208ENST00000494028 ZANQ9Y493 2812 aa8.06□□□□□ -1.12
CLCN6-208ENST00000494028 TEX15Q9BXT5 2789 aa8.05□□□□□ -1.12
CLCN6-208ENST00000494028 LOC102724200A0A096LPH7 203 aaPredicted RBP8.05□□□□□ -1.12
CLCN6-208ENST00000494028 OVOL1O14753 267 aa8.05□□□□□ -1.12
CLCN6-208ENST00000494028 DEFB1P60022 68 aa8.05□□□□□ -1.12
CLCN6-208ENST00000494028 HIST1H1AQ02539 215 aaPredicted RBP8.05□□□□□ -1.12
CLCN6-208ENST00000494028 LYZL1Q6UWQ5 148 aa8.05□□□□□ -1.12
CLCN6-208ENST00000494028 Q6ZWC4 215 aa8.05□□□□□ -1.12
CLCN6-208ENST00000494028 ZNF575Q86XF7 245 aa8.05□□□□□ -1.12
CLCN6-208ENST00000494028 FER1L6-AS1Q8NA97 138 aa8.05□□□□□ -1.12
CLCN6-208ENST00000494028 BORCS7Q96B45 105 aa8.05□□□□□ -1.12
CLCN6-208ENST00000494028 TPPP3Q9BW30 176 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms