RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 OR10G8Q8NGN5 311 aa9.19□□□□□ -0.94
BRCA1-222ENST00000493919 FBXL15Q9H469 300 aa9.19□□□□□ -0.94
BRCA1-222ENST00000493919 ZMAT4Q9H898 229 aa9.19□□□□□ -0.94
BRCA1-222ENST00000493919 CKLFQ9UBR5 152 aa9.19□□□□□ -0.94
BRCA1-222ENST00000493919 ZFP92A6NM28 416 aa9.19□□□□□ -0.94
BRCA1-222ENST00000493919 F2Z2F3 143 aa9.19□□□□□ -0.94
BRCA1-222ENST00000493919 TFF1P04155 84 aa9.19□□□□□ -0.94
BRCA1-222ENST00000493919 MSMBP08118 114 aa9.19□□□□□ -0.94
BRCA1-222ENST00000493919 CBLN1P23435 193 aa9.19□□□□□ -0.94
BRCA1-222ENST00000493919 GNG12Q9UBI6 72 aa9.19□□□□□ -0.94
BRCA1-222ENST00000493919 NIPBLQ6KC79 2804 aaeCLIP9.19□□□□□ -0.94
BRCA1-222ENST00000493919 MALRD1Q5VYJ5 2156 aa9.18□□□□□ -0.94
BRCA1-222ENST00000493919 OVOL1O14753 267 aa9.18□□□□□ -0.94
BRCA1-222ENST00000493919 PIN1P1O15428 100 aa9.18□□□□□ -0.94
BRCA1-222ENST00000493919 PGLYRP1O75594 196 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-222ENST00000493919 APCSP02743 223 aa9.18□□□□□ -0.94
BRCA1-222ENST00000493919 KLF17Q5JT82 389 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-222ENST00000493919 TCF23Q7RTU1 214 aa9.18□□□□□ -0.94
BRCA1-222ENST00000493919 TEN1Q86WV5 123 aa9.18□□□□□ -0.94
BRCA1-222ENST00000493919 IL17DQ8TAD2 202 aa9.18□□□□□ -0.94
BRCA1-222ENST00000493919 DPH3Q96FX2 82 aa9.18□□□□□ -0.94
BRCA1-222ENST00000493919 AJUBAQ96IF1 538 aa9.18□□□□□ -0.94
BRCA1-222ENST00000493919 CCL13Q99616 98 aa9.18□□□□□ -0.94
BRCA1-222ENST00000493919 RCL1Q9Y2P8 373 aaKnown RBP9.18□□□□□ -0.94
BRCA1-222ENST00000493919 SELENOKQ9Y6D0 94 aa9.18□□□□□ -0.94
BRCA1-222ENST00000493919 FAM90A10PA6NDY2 464 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 LGALS1P09382 135 aaKnown RBP9.17□□□□□ -0.94
BRCA1-222ENST00000493919 LEPP41159 167 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 KISS1Q15726 138 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 GAGE2AQ6NT46 116 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 TMEM14EPQ6UXP3 125 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 PRIMA1Q86XR5 153 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 FAM216BQ8N7L0 139 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 CTSZQ9UBR2 303 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 FAM236AA0A1B0GUQ0 79 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 FAM236BA0A1B0GV22 79 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 INAFM1C9JVW0 142 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 HSPB6O14558 160 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 NDUFC2O95298 119 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 FSTL3O95633 263 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 IZUMO4Q1ZYL8 232 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 RRN3P1Q2M238 152 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 ACP7Q6ZNF0 438 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 Q6ZS49 121 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 MKXQ8IYA7 352 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 EXOC3-AS1Q8N2X6 119 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 SLC39A9Q9NUM3 307 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 NF1P21359 2839 aa9.17□□□□□ -0.94
BRCA1-222ENST00000493919 TRBV5-7A0A0A0MS05 114 aa9.16□□□□□ -0.94
BRCA1-222ENST00000493919 CRYGAP11844 174 aa9.16□□□□□ -0.94
BRCA1-222ENST00000493919 ZFP36P26651 326 aaKnown RBP9.16□□□□□ -0.94
BRCA1-222ENST00000493919 PSMG4Q5JS54 123 aa9.16□□□□□ -0.94
BRCA1-222ENST00000493919 CFAP126Q5VTH2 177 aa9.16□□□□□ -0.94
BRCA1-222ENST00000493919 TEX45Q8NA69 505 aa9.16□□□□□ -0.94
BRCA1-222ENST00000493919 TMEM230Q96A57 120 aa9.16□□□□□ -0.94
BRCA1-222ENST00000493919 TMEM59Q9BXS4 323 aa9.16□□□□□ -0.94
BRCA1-222ENST00000493919 VSIRQ9H7M9 311 aa9.16□□□□□ -0.94
BRCA1-222ENST00000493919 IL36BQ9NZH7 164 aa9.16□□□□□ -0.94
BRCA1-222ENST00000493919 SETD2Q9BYW2 2564 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-222ENST00000493919 IGKV1D-17A0A075B6S4 117 aa9.15□□□□□ -0.94
BRCA1-222ENST00000493919 TRAV4A0A0B4J268 109 aa9.15□□□□□ -0.94
BRCA1-222ENST00000493919 C3orf85A0A1B0GTC6 90 aa9.15□□□□□ -0.94
BRCA1-222ENST00000493919 MDFIC2A0A1B0GVS7 189 aa9.15□□□□□ -0.94
BRCA1-222ENST00000493919 hDV102S1A0JD36 115 aa9.15□□□□□ -0.94
BRCA1-222ENST00000493919 OOSP1A8MZH6 123 aa9.15□□□□□ -0.94
BRCA1-222ENST00000493919 J3QQQ9 107 aa9.15□□□□□ -0.94
BRCA1-222ENST00000493919 HLA-DQA1P01909 254 aa9.15□□□□□ -0.94
BRCA1-222ENST00000493919 EFNB2P52799 333 aa9.15□□□□□ -0.94
BRCA1-222ENST00000493919 C1orf158Q8N1D5 194 aa9.15□□□□□ -0.94
BRCA1-222ENST00000493919 C1orf159Q96HA4 380 aa9.15□□□□□ -0.94
BRCA1-222ENST00000493919 TPSG1Q9NRR2 321 aa9.15□□□□□ -0.94
BRCA1-222ENST00000493919 IL36RNQ9UBH0 155 aa9.15□□□□□ -0.94
BRCA1-222ENST00000493919 PYGO1Q9Y3Y4 419 aa9.15□□□□□ -0.94
BRCA1-222ENST00000493919 HILPDAQ9Y5L2 63 aa9.15□□□□□ -0.94
BRCA1-222ENST00000493919 ARHGAP32A7KAX9 2087 aa9.15□□□□□ -0.94
BRCA1-222ENST00000493919 IGKV1-12A0A0C4DH73 117 aa9.15□□□□□ -0.95
BRCA1-222ENST00000493919 FAM24AA6NFZ4 105 aa9.15□□□□□ -0.95
BRCA1-222ENST00000493919 SNURFLB1AK76 121 aa9.15□□□□□ -0.95
BRCA1-222ENST00000493919 IGKV1D-12P01611 117 aa9.15□□□□□ -0.95
BRCA1-222ENST00000493919 OR5AL1P0C617 328 aa9.15□□□□□ -0.95
BRCA1-222ENST00000493919 IGFBP3P17936 291 aaPredicted RBP9.15□□□□□ -0.95
BRCA1-222ENST00000493919 AMY2BP19961 511 aa9.15□□□□□ -0.95
BRCA1-222ENST00000493919 CRIP3Q6Q6R5 217 aa9.15□□□□□ -0.95
BRCA1-222ENST00000493919 TBC1D26Q86UD7 250 aa9.15□□□□□ -0.95
BRCA1-222ENST00000493919 Q8IYB0 196 aa9.15□□□□□ -0.95
BRCA1-222ENST00000493919 ZNF645Q8N7E2 425 aa9.15□□□□□ -0.95
BRCA1-222ENST00000493919 PHLDA1Q8WV24 401 aaPredicted RBP9.15□□□□□ -0.95
BRCA1-222ENST00000493919 GAFA1Q96PS6 74 aa9.15□□□□□ -0.95
BRCA1-222ENST00000493919 CUBNO60494 3623 aa9.15□□□□□ -0.95
BRCA1-222ENST00000493919 WNK2Q9Y3S1 2297 aa9.14□□□□□ -0.95
BRCA1-222ENST00000493919 FN1P02751 2386 aaKnown RBP9.14□□□□□ -0.95
BRCA1-222ENST00000493919 NDUFB3O43676 98 aa9.14□□□□□ -0.95
BRCA1-222ENST00000493919 FGF6P10767 208 aa9.14□□□□□ -0.95
BRCA1-222ENST00000493919 PFN2P35080 140 aa9.14□□□□□ -0.95
BRCA1-222ENST00000493919 ECI1P42126 302 aa9.14□□□□□ -0.95
BRCA1-222ENST00000493919 KLF5Q13887 457 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-222ENST00000493919 NFE4Q86UQ8 179 aa9.14□□□□□ -0.95
BRCA1-222ENST00000493919 ZNRF1Q8ND25 227 aa9.14□□□□□ -0.95
BRCA1-222ENST00000493919 H1FXQ92522 213 aaKnown RBP9.14□□□□□ -0.95
BRCA1-222ENST00000493919 TMEM147Q9BVK8 224 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms