RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 CST9LP1Q5W188 147 aa13.01□□□□□ -0.33
PDLIM7-208ENST00000493815 C9orf47Q6ZRZ4 202 aa13.01□□□□□ -0.33
PDLIM7-208ENST00000493815 SGK494Q96LW2 274 aa13.01□□□□□ -0.33
PDLIM7-208ENST00000493815 IGHV3OR16-12A0A075B7B8 117 aa13□□□□□ -0.33
PDLIM7-208ENST00000493815 TRAV8-1A0A0A6YYK1 113 aa13□□□□□ -0.33
PDLIM7-208ENST00000493815 CRXO43186 299 aaPredicted RBP13□□□□□ -0.33
PDLIM7-208ENST00000493815 TMEM78Q5T7P6 136 aa13□□□□□ -0.33
PDLIM7-208ENST00000493815 C5orf17Q8NAS9 161 aa13□□□□□ -0.33
PDLIM7-208ENST00000493815 C1QTNF4Q9BXJ3 329 aa13□□□□□ -0.33
PDLIM7-208ENST00000493815 TRAV1-1A0A0B4J248 108 aa12.99□□□□□ -0.33
PDLIM7-208ENST00000493815 IFNA7P01567 189 aa12.99□□□□□ -0.33
PDLIM7-208ENST00000493815 TCRAP04437 139 aa12.99□□□□□ -0.33
PDLIM7-208ENST00000493815 ATP5G3P48201 142 aa12.99□□□□□ -0.33
PDLIM7-208ENST00000493815 OR11H2Q8NH07 326 aa12.99□□□□□ -0.33
PDLIM7-208ENST00000493815 LINC00477Q96M19 166 aa12.99□□□□□ -0.33
PDLIM7-208ENST00000493815 FAM210AQ96ND0 272 aa12.99□□□□□ -0.33
PDLIM7-208ENST00000493815 GNG13Q9P2W3 67 aa12.99□□□□□ -0.33
PDLIM7-208ENST00000493815 EPDR1Q9UM22 224 aa12.99□□□□□ -0.33
PDLIM7-208ENST00000493815 TP53TG1Q9Y2A0 90 aa12.99□□□□□ -0.33
PDLIM7-208ENST00000493815 CDKN1BP46527 198 aa12.99□□□□□ -0.33
PDLIM7-208ENST00000493815 RARRES2Q99969 163 aa12.99□□□□□ -0.33
PDLIM7-208ENST00000493815 RBAKDNA6NC62 111 aa12.98□□□□□ -0.33
PDLIM7-208ENST00000493815 TEX261Q6UWH6 196 aa12.98□□□□□ -0.33
PDLIM7-208ENST00000493815 C1orf158Q8N1D5 194 aa12.98□□□□□ -0.33
PDLIM7-208ENST00000493815 LINC00479Q96M42 142 aa12.98□□□□□ -0.33
PDLIM7-208ENST00000493815 ZNF492Q9P255 531 aa12.98□□□□□ -0.33
PDLIM7-208ENST00000493815 STAB2Q8WWQ8 2551 aa12.98□□□□□ -0.33
PDLIM7-208ENST00000493815 RBMY1A1P0DJD3 496 aaKnown RBP12.97□□□□□ -0.33
PDLIM7-208ENST00000493815 RBMY1CP0DJD4 496 aa12.97□□□□□ -0.33
PDLIM7-208ENST00000493815 ZNF138P52744 262 aa12.97□□□□□ -0.33
PDLIM7-208ENST00000493815 RBMY1FQ15415 496 aaKnown RBP12.97□□□□□ -0.33
PDLIM7-208ENST00000493815 PCNPQ8WW12 178 aaKnown RBP12.97□□□□□ -0.33
PDLIM7-208ENST00000493815 IGF2BP2-AS1Q96M15 143 aa12.97□□□□□ -0.33
PDLIM7-208ENST00000493815 TEX46H3BTG2 121 aa12.96□□□□□ -0.33
PDLIM7-208ENST00000493815 DEFB4AO15263 64 aa12.96□□□□□ -0.33
PDLIM7-208ENST00000493815 INSP01308 110 aa12.96□□□□□ -0.33
PDLIM7-208ENST00000493815 HBE1P02100 147 aa12.96□□□□□ -0.33
PDLIM7-208ENST00000493815 PRM2P04554 102 aa12.96□□□□□ -0.33
PDLIM7-208ENST00000493815 GFI1BQ5VTD9 330 aa12.96□□□□□ -0.33
PDLIM7-208ENST00000493815 CCDC28AQ8IWP9 274 aa12.96□□□□□ -0.33
PDLIM7-208ENST00000493815 FAM19A4Q96LR4 140 aa12.96□□□□□ -0.33
PDLIM7-208ENST00000493815 X6R8D5 127 aa12.96□□□□□ -0.33
PDLIM7-208ENST00000493815 TRAV34A0A0B4J273 112 aa12.96□□□□□ -0.34
PDLIM7-208ENST00000493815 TSPOP30536 169 aa12.96□□□□□ -0.34
PDLIM7-208ENST00000493815 LEPP41159 167 aa12.96□□□□□ -0.34
PDLIM7-208ENST00000493815 PRR9Q5T870 116 aa12.96□□□□□ -0.34
PDLIM7-208ENST00000493815 ZNF680Q8NEM1 530 aa12.96□□□□□ -0.34
PDLIM7-208ENST00000493815 ODF3Q96PU9 254 aa12.96□□□□□ -0.34
PDLIM7-208ENST00000493815 ATG101Q9BSB4 218 aa12.96□□□□□ -0.34
PDLIM7-208ENST00000493815 NKX6-2Q9C056 277 aaPredicted RBP12.96□□□□□ -0.34
PDLIM7-208ENST00000493815 PEX7O00628 323 aa12.95□□□□□ -0.34
PDLIM7-208ENST00000493815 AMBPP02760 352 aa12.95□□□□□ -0.34
PDLIM7-208ENST00000493815 BLOC1S1P78537 153 aa12.95□□□□□ -0.34
PDLIM7-208ENST00000493815 ZNF705AQ6ZN79 300 aaPredicted RBP12.95□□□□□ -0.34
PDLIM7-208ENST00000493815 ZFAND2AQ8N6M9 145 aa12.95□□□□□ -0.34
PDLIM7-208ENST00000493815 ARL6IP6Q8N6S5 226 aa12.95□□□□□ -0.34
PDLIM7-208ENST00000493815 CYB561D1Q8N8Q1 229 aa12.95□□□□□ -0.34
PDLIM7-208ENST00000493815 TMEM208Q9BTX3 173 aa12.95□□□□□ -0.34
PDLIM7-208ENST00000493815 TRAV12-3A0A0B4J271 114 aa12.94□□□□□ -0.34
PDLIM7-208ENST00000493815 IGLV2-11P01706 119 aa12.94□□□□□ -0.34
PDLIM7-208ENST00000493815 RNASE4P34096 147 aaKnown RBP12.94□□□□□ -0.34
PDLIM7-208ENST00000493815 PPT1P50897 306 aa12.94□□□□□ -0.34
PDLIM7-208ENST00000493815 BTN1A1Q13410 526 aa12.94□□□□□ -0.34
PDLIM7-208ENST00000493815 Q6ZQT7 251 aa12.94□□□□□ -0.34
PDLIM7-208ENST00000493815 TVP23CQ96ET8 276 aa12.94□□□□□ -0.34
PDLIM7-208ENST00000493815 GOLT1BQ9Y3E0 138 aa12.94□□□□□ -0.34
PDLIM7-208ENST00000493815 ARL2-SNX15V9GYD0 113 aa12.94□□□□□ -0.34
PDLIM7-208ENST00000493815 C11orf94C9JXX5 98 aa12.93□□□□□ -0.34
PDLIM7-208ENST00000493815 GPX1P07203 203 aa12.93□□□□□ -0.34
PDLIM7-208ENST00000493815 MANBALQ9NQG1 85 aa12.93□□□□□ -0.34
PDLIM7-208ENST00000493815 A0A0J9YWU9 116 aa12.93□□□□□ -0.34
PDLIM7-208ENST00000493815 KLLNB2CW77 178 aa12.93□□□□□ -0.34
PDLIM7-208ENST00000493815 K7EQM0 130 aa12.93□□□□□ -0.34
PDLIM7-208ENST00000493815 HTN1P15515 57 aa12.93□□□□□ -0.34
PDLIM7-208ENST00000493815 CRISP2P16562 243 aa12.93□□□□□ -0.34
PDLIM7-208ENST00000493815 PRNTQ86SH4 94 aa12.93□□□□□ -0.34
PDLIM7-208ENST00000493815 PSG8Q9UQ74 426 aa12.93□□□□□ -0.34
PDLIM7-208ENST00000493815 IGHV4-28A0A0C4DH34 117 aa12.92□□□□□ -0.34
PDLIM7-208ENST00000493815 SERTM2A0A1B0GWG4 89 aa12.92□□□□□ -0.34
PDLIM7-208ENST00000493815 SCO2A0A1W2PP80 73 aa12.92□□□□□ -0.34
PDLIM7-208ENST00000493815 F6UZH7 168 aa12.92□□□□□ -0.34
PDLIM7-208ENST00000493815 Q8NAQ8 132 aa12.92□□□□□ -0.34
PDLIM7-208ENST00000493815 HIST1H2BAQ96A08 127 aa12.92□□□□□ -0.34
PDLIM7-208ENST00000493815 LINC01587Q99440 93 aa12.92□□□□□ -0.34
PDLIM7-208ENST00000493815 C7orf71A4D174 169 aa12.91□□□□□ -0.34
PDLIM7-208ENST00000493815 ZNF705GA8MUZ8 300 aaPredicted RBP12.91□□□□□ -0.34
PDLIM7-208ENST00000493815 FLI1Q01543 452 aaPredicted RBP12.91□□□□□ -0.34
PDLIM7-208ENST00000493815 TMEM75Q8N9X5 138 aa12.91□□□□□ -0.34
PDLIM7-208ENST00000493815 LYPD6BQ8NI32 183 aa12.91□□□□□ -0.34
PDLIM7-208ENST00000493815 BCL2P10415 239 aa12.9□□□□□ -0.34
PDLIM7-208ENST00000493815 C8orf49Q96NF6 230 aa12.9□□□□□ -0.34
PDLIM7-208ENST00000493815 EDA2RQ9HAV5 297 aa12.9□□□□□ -0.34
PDLIM7-208ENST00000493815 TREM1Q9NP99 234 aa12.9□□□□□ -0.34
PDLIM7-208ENST00000493815 IFNA1P01562 189 aa12.89□□□□□ -0.35
PDLIM7-208ENST00000493815 EMP1P54849 157 aa12.89□□□□□ -0.35
PDLIM7-208ENST00000493815 TRBV7-9A0A0J9YWB2 115 aa12.89□□□□□ -0.35
PDLIM7-208ENST00000493815 ZNF324O75467 553 aaPredicted RBP12.89□□□□□ -0.35
PDLIM7-208ENST00000493815 NMBP08949 121 aa12.89□□□□□ -0.35
PDLIM7-208ENST00000493815 MIFP14174 115 aa12.89□□□□□ -0.35
PDLIM7-208ENST00000493815 AZU1P20160 251 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms