RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 TSPOP30536 169 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 CKS2P33552 79 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 ZNF138P52744 262 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 C9orf139Q6ZV77 190 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 NPFFR1Q9GZQ6 430 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 WNK2Q9Y3S1 2297 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 IGHV3-35A0A0C4DH35 117 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 D6R8Y8 96 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 M0QZ24 198 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 IGLL1P15814 213 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 ARL3P36405 182 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 PSMG4Q5JS54 123 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 C9orf47Q6ZRZ4 202 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 Q71RC1 249 aaPredicted RBP7.44□□□□□ -1.22
NPHP3-209ENST00000493732 SMIM15Q7Z3B0 74 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 ATOH7Q8N100 152 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 Q8TAT8 98 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 ZNF747Q9BV97 191 aa7.44□□□□□ -1.22
NPHP3-209ENST00000493732 TRAV40A0A0B4J280 105 aa7.43□□□□□ -1.22
NPHP3-209ENST00000493732 IGHV4-61A0A0C4DH41 118 aa7.43□□□□□ -1.22
NPHP3-209ENST00000493732 A0A0G2JLM5 398 aa7.43□□□□□ -1.22
NPHP3-209ENST00000493732 TMEM213A2RRL7 107 aa7.43□□□□□ -1.22
NPHP3-209ENST00000493732 LINC01548A6NM66 108 aa7.43□□□□□ -1.22
NPHP3-209ENST00000493732 IGHG2P01859 326 aa7.43□□□□□ -1.22
NPHP3-209ENST00000493732 ZNF80P51504 273 aaPredicted RBP7.43□□□□□ -1.22
NPHP3-209ENST00000493732 ATP5J2P56134 94 aa7.43□□□□□ -1.22
NPHP3-209ENST00000493732 GAGE1Q13065 139 aa7.43□□□□□ -1.22
NPHP3-209ENST00000493732 LINC01545Q5VT33 79 aa7.43□□□□□ -1.22
NPHP3-209ENST00000493732 C8orf86Q6ZUL3 223 aa7.43□□□□□ -1.22
NPHP3-209ENST00000493732 AMN1Q8IY45 258 aa7.43□□□□□ -1.22
NPHP3-209ENST00000493732 PIFOQ8TCI5 191 aa7.43□□□□□ -1.22
NPHP3-209ENST00000493732 DPF1Q92782 380 aa7.43□□□□□ -1.22
NPHP3-209ENST00000493732 PMCHL2Q9BQD1 86 aa7.43□□□□□ -1.22
NPHP3-209ENST00000493732 B4DSR2 109 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 MSMBP08118 114 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 HLA-DMBP28068 263 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 BATFQ16520 125 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 MRPL51Q4U2R6 128 aaKnown RBP7.42□□□□□ -1.22
NPHP3-209ENST00000493732 SAMD13Q5VXD3 122 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 TMEM219Q86XT9 240 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 C16orf92Q96LL3 132 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 AGPAT4-IT1Q9H0P7 198 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 SIGLEC8Q9NYZ4 499 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 ZNF580Q9UK33 172 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 ZZEF1O43149 2961 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 IGHV3OR16-8A0A075B7F1 116 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 A6NDX4 124 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 OVOL1O14753 267 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 TCF21O43680 179 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 HBDP02042 147 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 CACNG7P62955 275 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 IGFL4Q6B9Z1 124 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 SLC25A34Q6PIV7 304 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 GLMPQ8WWB7 406 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 LINC00477Q96M19 166 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 MAP1LC3AQ9H492 121 aa7.42□□□□□ -1.22
NPHP3-209ENST00000493732 NXT2Q9NPJ8 142 aaKnown RBP7.42□□□□□ -1.22
NPHP3-209ENST00000493732 HRNRQ86YZ3 2850 aaPredicted RBP7.41□□□□□ -1.22
NPHP3-209ENST00000493732 ZNF25P17030 456 aaPredicted RBP7.41□□□□□ -1.22
NPHP3-209ENST00000493732 IFI27P40305 119 aaPredicted RBP7.41□□□□□ -1.22
NPHP3-209ENST00000493732 PCP4P48539 62 aa7.41□□□□□ -1.22
NPHP3-209ENST00000493732 ERCC8Q13216 396 aa7.41□□□□□ -1.22
NPHP3-209ENST00000493732 BRD3OSQ6XYD6 125 aa7.41□□□□□ -1.22
NPHP3-209ENST00000493732 RNF182Q8N6D2 247 aa7.41□□□□□ -1.22
NPHP3-209ENST00000493732 LRBAP50851 2863 aa7.4□□□□□ -1.22
NPHP3-209ENST00000493732 TRAV8-2A0A0B4J237 113 aa7.4□□□□□ -1.22
NPHP3-209ENST00000493732 PRAC2D3DTV9 90 aa7.4□□□□□ -1.22
NPHP3-209ENST00000493732 SLC25A16P16260 332 aa7.4□□□□□ -1.22
NPHP3-209ENST00000493732 PPIFP30405 207 aaKnown RBP7.4□□□□□ -1.22
NPHP3-209ENST00000493732 COTL1Q14019 142 aa7.4□□□□□ -1.22
NPHP3-209ENST00000493732 LGALS9BQ3B8N2 356 aa7.4□□□□□ -1.22
NPHP3-209ENST00000493732 MAJINQ3KP22 176 aa7.4□□□□□ -1.22
NPHP3-209ENST00000493732 PRR31Q5SQ13 230 aa7.4□□□□□ -1.22
NPHP3-209ENST00000493732 LGALS9CQ6DKI2 356 aa7.4□□□□□ -1.22
NPHP3-209ENST00000493732 IL17RELQ6ZVW7 336 aa7.4□□□□□ -1.22
NPHP3-209ENST00000493732 SPTBN4Q9H254 2564 aa7.4□□□□□ -1.22
NPHP3-209ENST00000493732 IGHV3OR16-10A0A075B7F0 116 aa7.4□□□□□ -1.23
NPHP3-209ENST00000493732 IGHV3-66A0A0C4DH42 116 aa7.4□□□□□ -1.23
NPHP3-209ENST00000493732 TRBV7-9A0A0J9YWB2 115 aa7.4□□□□□ -1.23
NPHP3-209ENST00000493732 LINC01546A6NGU7 62 aa7.4□□□□□ -1.23
NPHP3-209ENST00000493732 H3BUX3 64 aa7.4□□□□□ -1.23
NPHP3-209ENST00000493732 DLEU1O43261 78 aa7.4□□□□□ -1.23
NPHP3-209ENST00000493732 C21orf62-AS1Q17RA5 79 aa7.4□□□□□ -1.23
NPHP3-209ENST00000493732 C12orf54Q6X4T0 127 aa7.4□□□□□ -1.23
NPHP3-209ENST00000493732 LINC00173Q6ZV60 143 aa7.4□□□□□ -1.23
NPHP3-209ENST00000493732 OR10J6PQ8NGY7 276 aa7.4□□□□□ -1.23
NPHP3-209ENST00000493732 IGHV4-4A0A075B6R2 117 aa7.39□□□□□ -1.23
NPHP3-209ENST00000493732 LOC389332A0A1B0GUA5 103 aa7.39□□□□□ -1.23
NPHP3-209ENST00000493732 OR1N2Q8NGR9 330 aa7.39□□□□□ -1.23
NPHP3-209ENST00000493732 TMEM208Q9BTX3 173 aa7.39□□□□□ -1.23
NPHP3-209ENST00000493732 IGHV4-30-2A0A087WSY4 118 aa7.39□□□□□ -1.23
NPHP3-209ENST00000493732 ZNF207O43670 478 aaKnown RBP7.39□□□□□ -1.23
NPHP3-209ENST00000493732 IGHV4-38-2P0DP08 117 aa7.39□□□□□ -1.23
NPHP3-209ENST00000493732 PF4V1P10720 104 aa7.39□□□□□ -1.23
NPHP3-209ENST00000493732 ZNF738Q8NE65 137 aa7.39□□□□□ -1.23
NPHP3-209ENST00000493732 SCRT2Q9NQ03 307 aa7.39□□□□□ -1.23
NPHP3-209ENST00000493732 GOLT1BQ9Y3E0 138 aa7.39□□□□□ -1.23
NPHP3-209ENST00000493732 CHTOPQ9Y3Y2 248 aaKnown RBP7.39□□□□□ -1.23
NPHP3-209ENST00000493732 IGHV3OR16-13A0A075B7E8 117 aa7.38□□□□□ -1.23
NPHP3-209ENST00000493732 IGHV3-74A0A0B4J1X5 117 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms