RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 KLF12Q9Y4X4 402 aa11.9□□□□□ -0.5
COL9A1-210ENST00000493682 SPINK4O60575 86 aa11.89□□□□□ -0.51
COL9A1-210ENST00000493682 NDUFB4O95168 129 aa11.89□□□□□ -0.51
COL9A1-210ENST00000493682 RNASE4P34096 147 aaKnown RBP11.89□□□□□ -0.51
COL9A1-210ENST00000493682 FUSP35637 526 aaKnown RBP eCLIP11.89□□□□□ -0.51
COL9A1-210ENST00000493682 VWC2Q2TAL6 325 aa11.89□□□□□ -0.51
COL9A1-210ENST00000493682 C12orf45Q8N5I9 185 aaPredicted RBP11.89□□□□□ -0.51
COL9A1-210ENST00000493682 EIF4E3Q8N5X7 224 aaKnown RBP11.89□□□□□ -0.51
COL9A1-210ENST00000493682 LINC00477Q96M19 166 aa11.89□□□□□ -0.51
COL9A1-210ENST00000493682 AGPAT4-IT1Q9H0P7 198 aa11.89□□□□□ -0.51
COL9A1-210ENST00000493682 RBM38Q9H0Z9 239 aaKnown RBP11.89□□□□□ -0.51
COL9A1-210ENST00000493682 C11orf1Q9H5F2 150 aa11.89□□□□□ -0.51
COL9A1-210ENST00000493682 SLC39A9Q9NUM3 307 aa11.89□□□□□ -0.51
COL9A1-210ENST00000493682 FAM24AA6NFZ4 105 aa11.88□□□□□ -0.51
COL9A1-210ENST00000493682 FAM25EA8MYX2 175 aa11.88□□□□□ -0.51
COL9A1-210ENST00000493682 EPM2AB3EWF7 344 aa11.88□□□□□ -0.51
COL9A1-210ENST00000493682 PAX4O43316 350 aa11.88□□□□□ -0.51
COL9A1-210ENST00000493682 NXPH4O95158 308 aa11.88□□□□□ -0.51
COL9A1-210ENST00000493682 RPL29P47914 159 aaKnown RBP11.88□□□□□ -0.51
COL9A1-210ENST00000493682 TCL1AP56279 114 aa11.88□□□□□ -0.51
COL9A1-210ENST00000493682 CNPY1Q3B7I2 92 aa11.88□□□□□ -0.51
COL9A1-210ENST00000493682 C20orf85Q9H1P6 137 aa11.88□□□□□ -0.51
COL9A1-210ENST00000493682 TMEM14CQ9P0S9 112 aa11.88□□□□□ -0.51
COL9A1-210ENST00000493682 PRELID1Q9Y255 219 aa11.88□□□□□ -0.51
COL9A1-210ENST00000493682 ICOSQ9Y6W8 199 aa11.88□□□□□ -0.51
COL9A1-210ENST00000493682 UBE2L5PA0A1B0GUS4 154 aa11.87□□□□□ -0.51
COL9A1-210ENST00000493682 HIST1H1EP10412 219 aaKnown RBP11.87□□□□□ -0.51
COL9A1-210ENST00000493682 EXOC3-AS1Q8N2X6 119 aa11.87□□□□□ -0.51
COL9A1-210ENST00000493682 ST6GAL2Q96JF0 529 aa11.87□□□□□ -0.51
COL9A1-210ENST00000493682 TIMM9Q9Y5J7 89 aa11.87□□□□□ -0.51
COL9A1-210ENST00000493682 C5orf51A6NDU8 294 aa11.86□□□□□ -0.51
COL9A1-210ENST00000493682 EREGO14944 169 aa11.86□□□□□ -0.51
COL9A1-210ENST00000493682 MPDU1O75352 247 aa11.86□□□□□ -0.51
COL9A1-210ENST00000493682 IGHV3-53P01767 116 aa11.86□□□□□ -0.51
COL9A1-210ENST00000493682 PYYP10082 97 aa11.86□□□□□ -0.51
COL9A1-210ENST00000493682 IL7P13232 177 aa11.86□□□□□ -0.51
COL9A1-210ENST00000493682 CRISP2P16562 243 aa11.86□□□□□ -0.51
COL9A1-210ENST00000493682 ERVFC1-1P60608 527 aa11.86□□□□□ -0.51
COL9A1-210ENST00000493682 BAXQ07812 192 aa11.86□□□□□ -0.51
COL9A1-210ENST00000493682 IBA57Q5T440 356 aaKnown RBP11.86□□□□□ -0.51
COL9A1-210ENST00000493682 CHAC2Q8WUX2 184 aa11.86□□□□□ -0.51
COL9A1-210ENST00000493682 TP53TG3Q9ULZ0 132 aa11.86□□□□□ -0.51
COL9A1-210ENST00000493682 TNFRSF18Q9Y5U5 241 aa11.86□□□□□ -0.51
COL9A1-210ENST00000493682 GPX1P07203 203 aa11.85□□□□□ -0.51
COL9A1-210ENST00000493682 S100A11P31949 105 aa11.85□□□□□ -0.51
COL9A1-210ENST00000493682 SULT1A1P50225 295 aa11.85□□□□□ -0.51
COL9A1-210ENST00000493682 PDE6HQ13956 83 aa11.85□□□□□ -0.51
COL9A1-210ENST00000493682 PRR9Q5T870 116 aa11.85□□□□□ -0.51
COL9A1-210ENST00000493682 C9orf47Q6ZRZ4 202 aa11.85□□□□□ -0.51
COL9A1-210ENST00000493682 ZFAND2AQ8N6M9 145 aa11.85□□□□□ -0.51
COL9A1-210ENST00000493682 BLNKQ8WV28 456 aa11.85□□□□□ -0.51
COL9A1-210ENST00000493682 MRPL16Q9NX20 251 aaKnown RBP11.85□□□□□ -0.51
COL9A1-210ENST00000493682 PTTG2Q9NZH5 202 aa11.85□□□□□ -0.51
COL9A1-210ENST00000493682 PRO0255Q9UI72 69 aa11.85□□□□□ -0.51
COL9A1-210ENST00000493682 IGKV2-40A0A087WW87 121 aaPredicted RBP11.84□□□□□ -0.51
COL9A1-210ENST00000493682 IGSF23A1L1A6 192 aa11.84□□□□□ -0.51
COL9A1-210ENST00000493682 RGS13O14921 159 aa11.84□□□□□ -0.51
COL9A1-210ENST00000493682 PLA2G10O15496 165 aa11.84□□□□□ -0.51
COL9A1-210ENST00000493682 IGKV2D-40P01614 121 aaPredicted RBP11.84□□□□□ -0.51
COL9A1-210ENST00000493682 NMBP08949 121 aa11.84□□□□□ -0.51
COL9A1-210ENST00000493682 PVALBP20472 110 aaPredicted RBP11.84□□□□□ -0.51
COL9A1-210ENST00000493682 FGF7P21781 194 aa11.84□□□□□ -0.51
COL9A1-210ENST00000493682 XGP55808 180 aa11.84□□□□□ -0.51
COL9A1-210ENST00000493682 CDPF1Q6NVV7 123 aa11.84□□□□□ -0.51
COL9A1-210ENST00000493682 LYPD5Q6UWN5 251 aa11.84□□□□□ -0.51
COL9A1-210ENST00000493682 Q6ZQT7 251 aa11.84□□□□□ -0.51
COL9A1-210ENST00000493682 LYPD1Q8N2G4 141 aa11.84□□□□□ -0.51
COL9A1-210ENST00000493682 C2orf50Q96LR7 162 aa11.84□□□□□ -0.51
COL9A1-210ENST00000493682 VGLL1Q99990 258 aa11.84□□□□□ -0.51
COL9A1-210ENST00000493682 LYRM2Q9NU23 88 aaPredicted RBP11.84□□□□□ -0.51
COL9A1-210ENST00000493682 CRYBA4P53673 196 aa11.83□□□□□ -0.52
COL9A1-210ENST00000493682 S100A10P60903 97 aa11.83□□□□□ -0.52
COL9A1-210ENST00000493682 ICAM4Q14773 271 aa11.83□□□□□ -0.52
COL9A1-210ENST00000493682 GCSAMLQ5JQS6 135 aa11.83□□□□□ -0.52
COL9A1-210ENST00000493682 TMEM78Q5T7P6 136 aa11.83□□□□□ -0.52
COL9A1-210ENST00000493682 TMEM252Q8N6L7 170 aa11.83□□□□□ -0.52
COL9A1-210ENST00000493682 C8orf49Q96NF6 230 aa11.83□□□□□ -0.52
COL9A1-210ENST00000493682 SEC22CQ9BRL7 303 aa11.83□□□□□ -0.52
COL9A1-210ENST00000493682 AAMDCQ9H7C9 122 aa11.83□□□□□ -0.52
COL9A1-210ENST00000493682 HHLA3Q9XRX5 114 aa11.83□□□□□ -0.52
COL9A1-210ENST00000493682 HERC1Q15751 4861 aa11.83□□□□□ -0.52
COL9A1-210ENST00000493682 TRAV6A0A075B6T7 132 aa11.82□□□□□ -0.52
COL9A1-210ENST00000493682 IGHV1OR15-1A0A075B7D0 117 aa11.82□□□□□ -0.52
COL9A1-210ENST00000493682 PRAF2O60831 178 aa11.82□□□□□ -0.52
COL9A1-210ENST00000493682 TCRBP04435 133 aa11.82□□□□□ -0.52
COL9A1-210ENST00000493682 HBG1P69891 147 aa11.82□□□□□ -0.52
COL9A1-210ENST00000493682 HBG2P69892 147 aa11.82□□□□□ -0.52
COL9A1-210ENST00000493682 SLAQ13239 276 aa11.82□□□□□ -0.52
COL9A1-210ENST00000493682 FHL2Q14192 279 aa11.82□□□□□ -0.52
COL9A1-210ENST00000493682 MRPL23Q16540 153 aaKnown RBP11.82□□□□□ -0.52
COL9A1-210ENST00000493682 FAM122CQ6P4D5 195 aa11.82□□□□□ -0.52
COL9A1-210ENST00000493682 NFE4Q86UQ8 179 aa11.82□□□□□ -0.52
COL9A1-210ENST00000493682 STX12Q86Y82 276 aa11.82□□□□□ -0.52
COL9A1-210ENST00000493682 SLC25A2Q9BXI2 301 aa11.82□□□□□ -0.52
COL9A1-210ENST00000493682 A0A087WTM6 91 aa11.81□□□□□ -0.52
COL9A1-210ENST00000493682 LYRM1O43325 122 aa11.81□□□□□ -0.52
COL9A1-210ENST00000493682 DNAH10OSP0CZ25 163 aa11.81□□□□□ -0.52
COL9A1-210ENST00000493682 INAFM2P0DMQ5 153 aa11.81□□□□□ -0.52
COL9A1-210ENST00000493682 IL15RAQ13261 267 aa11.81□□□□□ -0.52
COL9A1-210ENST00000493682 FAM167A-AS1Q96KT0 104 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms