RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 TRGV2A0A075B6R0 118 aa11.52□□□□□ -0.57
PTPRU-208ENST00000493601 FAM240BA0A1B0GVZ2 78 aa11.52□□□□□ -0.57
PTPRU-208ENST00000493601 KLLNB2CW77 178 aa11.52□□□□□ -0.57
PTPRU-208ENST00000493601 NDUFB4O95168 129 aa11.52□□□□□ -0.57
PTPRU-208ENST00000493601 ERCC8Q13216 396 aa11.52□□□□□ -0.57
PTPRU-208ENST00000493601 IL15RAQ13261 267 aa11.52□□□□□ -0.57
PTPRU-208ENST00000493601 LINC00477Q96M19 166 aa11.52□□□□□ -0.57
PTPRU-208ENST00000493601 LINC00467Q9BRT7 94 aa11.52□□□□□ -0.57
PTPRU-208ENST00000493601 MRPS16Q9Y3D3 137 aaKnown RBP11.52□□□□□ -0.57
PTPRU-208ENST00000493601 A0A1W2PPQ1 181 aa11.51□□□□□ -0.57
PTPRU-208ENST00000493601 PYYP10082 97 aa11.51□□□□□ -0.57
PTPRU-208ENST00000493601 MZT2BQ6NZ67 158 aa11.51□□□□□ -0.57
PTPRU-208ENST00000493601 C11orf72Q8NBR9 251 aa11.51□□□□□ -0.57
PTPRU-208ENST00000493601 BLNKQ8WV28 456 aa11.51□□□□□ -0.57
PTPRU-208ENST00000493601 FAM19A4Q96LR4 140 aa11.51□□□□□ -0.57
PTPRU-208ENST00000493601 C18orf15Q96N68 181 aa11.51□□□□□ -0.57
PTPRU-208ENST00000493601 KRTAP1-5Q9BYS1 174 aa11.51□□□□□ -0.57
PTPRU-208ENST00000493601 GSN-AS1Q9NRJ2 163 aa11.51□□□□□ -0.57
PTPRU-208ENST00000493601 ZNF324O75467 553 aaPredicted RBP11.5□□□□□ -0.57
PTPRU-208ENST00000493601 BTN1A1Q13410 526 aa11.5□□□□□ -0.57
PTPRU-208ENST00000493601 ESRGQ1W209 222 aa11.5□□□□□ -0.57
PTPRU-208ENST00000493601 ANXA2RQ3ZCQ2 193 aa11.5□□□□□ -0.57
PTPRU-208ENST00000493601 C9orf47Q6ZRZ4 202 aa11.5□□□□□ -0.57
PTPRU-208ENST00000493601 EIF4E3Q8N5X7 224 aaKnown RBP11.5□□□□□ -0.57
PTPRU-208ENST00000493601 HSPG2P98160 4391 aa11.49□□□□□ -0.57
PTPRU-208ENST00000493601 TRGV1A0A0A0MS02 117 aa11.49□□□□□ -0.57
PTPRU-208ENST00000493601 GPX1P07203 203 aa11.49□□□□□ -0.57
PTPRU-208ENST00000493601 NMBP08949 121 aa11.49□□□□□ -0.57
PTPRU-208ENST00000493601 CRISP2P16562 243 aa11.49□□□□□ -0.57
PTPRU-208ENST00000493601 BTF3P20290 206 aaKnown RBP11.49□□□□□ -0.57
PTPRU-208ENST00000493601 RNASE4P34096 147 aaKnown RBP11.49□□□□□ -0.57
PTPRU-208ENST00000493601 CD300CQ08708 224 aa11.49□□□□□ -0.57
PTPRU-208ENST00000493601 GCSAMLQ5JQS6 135 aa11.49□□□□□ -0.57
PTPRU-208ENST00000493601 TMEM78Q5T7P6 136 aa11.49□□□□□ -0.57
PTPRU-208ENST00000493601 EXOC3-AS1Q8N2X6 119 aa11.49□□□□□ -0.57
PTPRU-208ENST00000493601 THAP6Q8TBB0 222 aa11.49□□□□□ -0.57
PTPRU-208ENST00000493601 SLC25A2Q9BXI2 301 aa11.49□□□□□ -0.57
PTPRU-208ENST00000493601 AGPAT4-IT1Q9H0P7 198 aa11.49□□□□□ -0.57
PTPRU-208ENST00000493601 KCNIP2Q9NS61 270 aa11.49□□□□□ -0.57
PTPRU-208ENST00000493601 FUT9Q9Y231 359 aa11.49□□□□□ -0.57
PTPRU-208ENST00000493601 ABCA13Q86UQ4 5058 aa11.48□□□□□ -0.57
PTPRU-208ENST00000493601 IGKV2-40A0A087WW87 121 aaPredicted RBP11.48□□□□□ -0.57
PTPRU-208ENST00000493601 IGKV2D-40P01614 121 aaPredicted RBP11.48□□□□□ -0.57
PTPRU-208ENST00000493601 TCL1AP56279 114 aa11.48□□□□□ -0.57
PTPRU-208ENST00000493601 ICAM4Q14773 271 aa11.48□□□□□ -0.57
PTPRU-208ENST00000493601 IBA57Q5T440 356 aaKnown RBP11.48□□□□□ -0.57
PTPRU-208ENST00000493601 OR5C1Q8NGR4 320 aa11.48□□□□□ -0.57
PTPRU-208ENST00000493601 SLC25A31Q9H0C2 315 aa11.48□□□□□ -0.57
PTPRU-208ENST00000493601 A0A096LPF7 62 aa11.47□□□□□ -0.57
PTPRU-208ENST00000493601 RGS13O14921 159 aa11.47□□□□□ -0.57
PTPRU-208ENST00000493601 ASAH1Q13510 395 aa11.47□□□□□ -0.57
PTPRU-208ENST00000493601 FAM122CQ6P4D5 195 aa11.47□□□□□ -0.57
PTPRU-208ENST00000493601 SPATA12Q7Z6I5 190 aa11.47□□□□□ -0.57
PTPRU-208ENST00000493601 VSIG2Q96IQ7 327 aa11.47□□□□□ -0.57
PTPRU-208ENST00000493601 KRTAP4-5Q9BYR2 181 aa11.47□□□□□ -0.57
PTPRU-208ENST00000493601 E5RGE8 158 aa11.46□□□□□ -0.57
PTPRU-208ENST00000493601 SPINK4O60575 86 aa11.46□□□□□ -0.57
PTPRU-208ENST00000493601 NBEAP1P0C6P0 100 aa11.46□□□□□ -0.57
PTPRU-208ENST00000493601 NHLH2Q02577 135 aa11.46□□□□□ -0.57
PTPRU-208ENST00000493601 LINC00299Q6ZSB3 139 aa11.46□□□□□ -0.57
PTPRU-208ENST00000493601 MIR17HGQ75NE6 70 aa11.46□□□□□ -0.57
PTPRU-208ENST00000493601 ZFAND2AQ8N6M9 145 aa11.46□□□□□ -0.57
PTPRU-208ENST00000493601 MAPKAPK5-AS1Q8N8E1 139 aa11.46□□□□□ -0.57
PTPRU-208ENST00000493601 ST6GAL2Q96JF0 529 aa11.46□□□□□ -0.57
PTPRU-208ENST00000493601 FAM167A-AS1Q96KT0 104 aa11.46□□□□□ -0.57
PTPRU-208ENST00000493601 VGLL1Q99990 258 aa11.46□□□□□ -0.57
PTPRU-208ENST00000493601 MRPL32Q9BYC8 188 aaKnown RBP11.46□□□□□ -0.57
PTPRU-208ENST00000493601 KLF12Q9Y4X4 402 aa11.46□□□□□ -0.57
PTPRU-208ENST00000493601 ENKURQ8TC29 256 aa11.45□□□□□ -0.58
PTPRU-208ENST00000493601 S100ZQ8WXG8 99 aa11.45□□□□□ -0.58
PTPRU-208ENST00000493601 ARPC5LQ9BPX5 153 aa11.45□□□□□ -0.58
PTPRU-208ENST00000493601 PAXXQ9BUH6 204 aa11.45□□□□□ -0.58
PTPRU-208ENST00000493601 NMES1Q9C002 83 aa11.45□□□□□ -0.58
PTPRU-208ENST00000493601 OR51M1Q9H341 326 aa11.45□□□□□ -0.58
PTPRU-208ENST00000493601 ZNF492Q9P255 531 aa11.45□□□□□ -0.58
PTPRU-208ENST00000493601 ICOSQ9Y6W8 199 aa11.45□□□□□ -0.58
PTPRU-208ENST00000493601 LRP1BQ9NZR2 4599 aa11.44□□□□□ -0.58
PTPRU-208ENST00000493601 IGHV1OR15-1A0A075B7D0 117 aa11.44□□□□□ -0.58
PTPRU-208ENST00000493601 TRBV7-9A0A0J9YWB2 115 aa11.44□□□□□ -0.58
PTPRU-208ENST00000493601 PAX4O43316 350 aa11.44□□□□□ -0.58
PTPRU-208ENST00000493601 LRRC37A5PQ49AS3 106 aa11.44□□□□□ -0.58
PTPRU-208ENST00000493601 PRR9Q5T870 116 aa11.44□□□□□ -0.58
PTPRU-208ENST00000493601 FXYD5Q96DB9 178 aa11.44□□□□□ -0.58
PTPRU-208ENST00000493601 C17orf112F2Z3M2 114 aa11.43□□□□□ -0.58
PTPRU-208ENST00000493601 SIVA1O15304 175 aa11.43□□□□□ -0.58
PTPRU-208ENST00000493601 OR10J4P0C629 311 aa11.43□□□□□ -0.58
PTPRU-208ENST00000493601 CSN1S1P47710 185 aa11.43□□□□□ -0.58
PTPRU-208ENST00000493601 ZNF138P52744 262 aa11.43□□□□□ -0.58
PTPRU-208ENST00000493601 ZNF415Q09FC8 603 aa11.43□□□□□ -0.58
PTPRU-208ENST00000493601 Q8TAT8 98 aa11.43□□□□□ -0.58
PTPRU-208ENST00000493601 WDR61Q9GZS3 305 aaKnown RBP11.43□□□□□ -0.58
PTPRU-208ENST00000493601 MRPL16Q9NX20 251 aaKnown RBP11.43□□□□□ -0.58
PTPRU-208ENST00000493601 OR5AC2Q9NZP5 309 aa11.43□□□□□ -0.58
PTPRU-208ENST00000493601 TP53TG3Q9ULZ0 132 aa11.43□□□□□ -0.58
PTPRU-208ENST00000493601 OR7C2O60412 319 aa11.42□□□□□ -0.58
PTPRU-208ENST00000493601 SIX6O95475 246 aa11.42□□□□□ -0.58
PTPRU-208ENST00000493601 LINC00315P59091 139 aa11.42□□□□□ -0.58
PTPRU-208ENST00000493601 CYCSP99999 105 aaKnown RBP11.42□□□□□ -0.58
PTPRU-208ENST00000493601 SLAQ13239 276 aa11.42□□□□□ -0.58
PTPRU-208ENST00000493601 PHYHIPLQ96FC7 376 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms