RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 C16orf47Q6ZP98 133 aaPredicted RBP5.43□□□□□ -1.54
VPS13B-205ENST00000493587 RFESDQ8TAC1 157 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 PROK2Q9HC23 129 aa5.43□□□□□ -1.54
VPS13B-205ENST00000493587 IGHV3-15A0A0B4J1V0 119 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 OVOL1O14753 267 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 EFNA2O43921 213 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 IGLV2-14P01704 120 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 C10orf113Q5VZT2 155 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 LINC00336Q6ZUF6 198 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 EXOC3-AS1Q8N2X6 119 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 BRK1Q8WUW1 75 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 RPUSD1Q9UJJ7 312 aaKnown RBP5.42□□□□□ -1.54
VPS13B-205ENST00000493587 PYGO1Q9Y3Y4 419 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 GFRA3O60609 400 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 IGHG4P01861 327 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 UBE2D3P61077 147 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 UBE2D2P62837 147 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 CT83Q5H943 113 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 Q6P435 159 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 PLXDC1Q8IUK5 500 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 C8orf31Q8N9H6 132 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 MRPL20Q9BYC9 149 aaKnown RBP5.42□□□□□ -1.54
VPS13B-205ENST00000493587 GFRA4Q9GZZ7 299 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 KLK15Q9H2R5 256 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 SMG1Q96Q15 3661 aaKnown RBP5.42□□□□□ -1.54
VPS13B-205ENST00000493587 SDK2Q58EX2 2172 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 LGALS9O00182 355 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 COX6A1P12074 109 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 PRDX2P32119 198 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 ATXN8Q156A1 80 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 NSUN5P1Q3KNT7 163 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 FAM53AQ6NSI3 398 aaPredicted RBP5.42□□□□□ -1.54
VPS13B-205ENST00000493587 MRPL14Q6P1L8 145 aaKnown RBP5.42□□□□□ -1.54
VPS13B-205ENST00000493587 FOXL2NBQ6ZUU3 175 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 ZNF492Q9P255 531 aa5.42□□□□□ -1.54
VPS13B-205ENST00000493587 TNCP24821 2201 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 SHISA9B4DS77 424 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 IGHV3-13P01766 116 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 ZNF32P17041 273 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 TMEM258P61165 79 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 PRR20EP86478 221 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 PRR20CP86479 221 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 PRR20DP86480 221 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 PRR20BP86481 221 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 PRR20AP86496 221 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 MORN5Q5VZ52 161 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 SDK1Q7Z5N4 2213 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 WI2-2373I1.2A0A1W2PRP0 233 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 K7EM74 188 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 LINC01620Q4KN68 170 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 NDUFA11Q86Y39 141 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 ITLN1Q8WWA0 313 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 SCNM1Q9BWG6 230 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 RETNQ9HD89 108 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 PRO1854Q9UHT4 67 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 CADP27708 2225 aa5.41□□□□□ -1.54
VPS13B-205ENST00000493587 C15orf65H3BRN8 121 aa5.4□□□□□ -1.54
VPS13B-205ENST00000493587 SPINT2O43291 252 aa5.4□□□□□ -1.54
VPS13B-205ENST00000493587 NGFP01138 241 aa5.4□□□□□ -1.54
VPS13B-205ENST00000493587 IGHV3-48P01763 117 aa5.4□□□□□ -1.54
VPS13B-205ENST00000493587 PCBD1P61457 104 aa5.4□□□□□ -1.54
VPS13B-205ENST00000493587 GOLT1AQ6ZVE7 132 aa5.4□□□□□ -1.54
VPS13B-205ENST00000493587 TRAV3A0A0B4J244 114 aa5.4□□□□□ -1.54
VPS13B-205ENST00000493587 A0A1W2PNU3 283 aaPredicted RBP5.4□□□□□ -1.54
VPS13B-205ENST00000493587 OOEPA6NGQ2 149 aa5.4□□□□□ -1.54
VPS13B-205ENST00000493587 H7C1H1 209 aa5.4□□□□□ -1.54
VPS13B-205ENST00000493587 LOXL3P58215 753 aa5.4□□□□□ -1.54
VPS13B-205ENST00000493587 DOCK10Q96BY6 2186 aa5.4□□□□□ -1.55
VPS13B-205ENST00000493587 ZNF22P17026 224 aaPredicted RBP5.4□□□□□ -1.55
VPS13B-205ENST00000493587 MRPL51Q4U2R6 128 aaKnown RBP5.4□□□□□ -1.55
VPS13B-205ENST00000493587 PLA2G2CQ5R387 149 aa5.4□□□□□ -1.55
VPS13B-205ENST00000493587 IL17DQ8TAD2 202 aa5.4□□□□□ -1.55
VPS13B-205ENST00000493587 PIFOQ8TCI5 191 aa5.4□□□□□ -1.55
VPS13B-205ENST00000493587 GNG12Q9UBI6 72 aa5.4□□□□□ -1.55
VPS13B-205ENST00000493587 LINC00473A8K010 186 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 INS-IGF2F8WCM5 200 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 J3QQQ9 107 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 SLC25A16P16260 332 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 HLA-DMBP28068 263 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 FAM27E3Q08E93 113 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 MLANAQ16655 118 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 FAM104BQ5XKR9 115 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 FMC1Q96HJ9 113 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 S1PR3Q99500 378 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 TRAV17A0A0B4J275 112 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 M0R3E3 92 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 TEX36Q5VZQ5 186 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 SBSPONQ8IVN8 264 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 ZNF837Q96EG3 531 aaPredicted RBP5.39□□□□□ -1.55
VPS13B-205ENST00000493587 IGHV3-20A0A0C4DH32 117 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 CRYGBP07316 175 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 PLNP26678 52 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 DAZAP2Q15038 168 aaPredicted RBP5.39□□□□□ -1.55
VPS13B-205ENST00000493587 C2orf83Q53S99 150 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 LYZL1Q6UWQ5 148 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 FAM19A4Q96LR4 140 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 PRSS22Q9GZN4 317 aa5.39□□□□□ -1.55
VPS13B-205ENST00000493587 ZDBF2Q9HCK1 2354 aa5.38□□□□□ -1.55
VPS13B-205ENST00000493587 ATOX1O00244 68 aa5.38□□□□□ -1.55
VPS13B-205ENST00000493587 AAED1Q7RTV5 226 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms