RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 FOXA3P55318 350 aaPredicted RBP10.7□□□□□ -0.7
PTPN7-216ENST00000492977 TM4SF20Q53R12 229 aa10.7□□□□□ -0.7
PTPN7-216ENST00000492977 GFI1BQ5VTD9 330 aa10.7□□□□□ -0.7
PTPN7-216ENST00000492977 RBPMS2Q6ZRY4 209 aaKnown RBP10.7□□□□□ -0.7
PTPN7-216ENST00000492977 Q71RC1 249 aaPredicted RBP10.7□□□□□ -0.7
PTPN7-216ENST00000492977 TCF24Q7RTU0 167 aa10.7□□□□□ -0.7
PTPN7-216ENST00000492977 RHPN1-AS1Q9BWJ2 59 aa10.7□□□□□ -0.7
PTPN7-216ENST00000492977 ITPR3Q14573 2671 aa10.7□□□□□ -0.7
PTPN7-216ENST00000492977 IFITM10A6NMD0 228 aa10.69□□□□□ -0.7
PTPN7-216ENST00000492977 PRAC2D3DTV9 90 aa10.69□□□□□ -0.7
PTPN7-216ENST00000492977 PRB4P10163 310 aaPredicted RBP10.69□□□□□ -0.7
PTPN7-216ENST00000492977 BMI1P35226 326 aa10.69□□□□□ -0.7
PTPN7-216ENST00000492977 RAB4BP61018 213 aa10.69□□□□□ -0.7
PTPN7-216ENST00000492977 FAM162BQ5T6X4 162 aa10.69□□□□□ -0.7
PTPN7-216ENST00000492977 GTSF1Q8WW33 167 aa10.69□□□□□ -0.7
PTPN7-216ENST00000492977 DUX5Q96PT3 197 aa10.69□□□□□ -0.7
PTPN7-216ENST00000492977 ASCL2Q99929 193 aa10.69□□□□□ -0.7
PTPN7-216ENST00000492977 YAE1D1Q9NRH1 226 aa10.69□□□□□ -0.7
PTPN7-216ENST00000492977 PDZD2O15018 2839 aa10.69□□□□□ -0.7
PTPN7-216ENST00000492977 A0A1B0GXF2 115 aa10.69□□□□□ -0.7
PTPN7-216ENST00000492977 S100A2P29034 98 aa10.69□□□□□ -0.7
PTPN7-216ENST00000492977 GPR61Q9BZJ8 451 aa10.69□□□□□ -0.7
PTPN7-216ENST00000492977 PPP1R14DQ9NXH3 145 aa10.69□□□□□ -0.7
PTPN7-216ENST00000492977 SOCS3O14543 225 aa10.68□□□□□ -0.7
PTPN7-216ENST00000492977 ERCC8Q13216 396 aa10.68□□□□□ -0.7
PTPN7-216ENST00000492977 SCGB2A2Q13296 93 aa10.68□□□□□ -0.7
PTPN7-216ENST00000492977 C9orf47Q6ZRZ4 202 aa10.68□□□□□ -0.7
PTPN7-216ENST00000492977 NRN1Q9NPD7 142 aa10.68□□□□□ -0.7
PTPN7-216ENST00000492977 DNAJC9-AS1A6NH13 148 aa10.67□□□□□ -0.7
PTPN7-216ENST00000492977 LGALS9O00182 355 aa10.67□□□□□ -0.7
PTPN7-216ENST00000492977 SH2D1AO60880 128 aa10.67□□□□□ -0.7
PTPN7-216ENST00000492977 APCSP02743 223 aa10.67□□□□□ -0.7
PTPN7-216ENST00000492977 SMIM6P0DI80 62 aa10.67□□□□□ -0.7
PTPN7-216ENST00000492977 CRISP2P16562 243 aa10.67□□□□□ -0.7
PTPN7-216ENST00000492977 HBBP68871 147 aa10.67□□□□□ -0.7
PTPN7-216ENST00000492977 CTAG1AP78358 180 aa10.67□□□□□ -0.7
PTPN7-216ENST00000492977 TMEM78Q5T7P6 136 aa10.67□□□□□ -0.7
PTPN7-216ENST00000492977 SAMD13Q5VXD3 122 aa10.67□□□□□ -0.7
PTPN7-216ENST00000492977 Q6AWC8 147 aa10.67□□□□□ -0.7
PTPN7-216ENST00000492977 KLHDC1Q8N7A1 406 aa10.67□□□□□ -0.7
PTPN7-216ENST00000492977 Q8TAT8 98 aa10.67□□□□□ -0.7
PTPN7-216ENST00000492977 PGLYRP4Q96LB8 373 aa10.67□□□□□ -0.7
PTPN7-216ENST00000492977 AGPAT4-IT1Q9H0P7 198 aa10.67□□□□□ -0.7
PTPN7-216ENST00000492977 CCDC168Q8NDH2 2452 aa10.66□□□□□ -0.7
PTPN7-216ENST00000492977 TMEM189A5PLL7 270 aa10.66□□□□□ -0.7
PTPN7-216ENST00000492977 FAM181BA6NEQ2 426 aa10.66□□□□□ -0.7
PTPN7-216ENST00000492977 A8MWP6 167 aa10.66□□□□□ -0.7
PTPN7-216ENST00000492977 ZNF138P52744 262 aa10.66□□□□□ -0.7
PTPN7-216ENST00000492977 RPS20P60866 119 aaKnown RBP10.66□□□□□ -0.7
PTPN7-216ENST00000492977 RPL11P62913 178 aaKnown RBP10.66□□□□□ -0.7
PTPN7-216ENST00000492977 S100A12P80511 92 aa10.66□□□□□ -0.7
PTPN7-216ENST00000492977 SRSF2Q01130 221 aaKnown RBP10.66□□□□□ -0.7
PTPN7-216ENST00000492977 PDZD11Q5EBL8 140 aa10.66□□□□□ -0.7
PTPN7-216ENST00000492977 TMEM160Q9NX00 188 aa10.66□□□□□ -0.7
PTPN7-216ENST00000492977 FABP5P3A8MUU1 101 aa10.65□□□□□ -0.7
PTPN7-216ENST00000492977 OVOL1O14753 267 aa10.65□□□□□ -0.7
PTPN7-216ENST00000492977 GZMBP10144 247 aa10.65□□□□□ -0.7
PTPN7-216ENST00000492977 Q0VG73 95 aa10.65□□□□□ -0.7
PTPN7-216ENST00000492977 GDF5OSQ5U4N7 250 aa10.65□□□□□ -0.7
PTPN7-216ENST00000492977 ZNF738Q8NE65 137 aa10.65□□□□□ -0.7
PTPN7-216ENST00000492977 C12orf57Q99622 126 aa10.65□□□□□ -0.7
PTPN7-216ENST00000492977 HIST1H2BLQ99880 126 aa10.65□□□□□ -0.7
PTPN7-216ENST00000492977 LENEPQ9Y5L5 61 aa10.65□□□□□ -0.7
PTPN7-216ENST00000492977 IGHV4OR15-8A0A075B7B6 117 aa10.65□□□□□ -0.71
PTPN7-216ENST00000492977 A0A087WW49 117 aa10.65□□□□□ -0.71
PTPN7-216ENST00000492977 TMEM213A2RRL7 107 aa10.65□□□□□ -0.71
PTPN7-216ENST00000492977 FABP4P15090 132 aa10.65□□□□□ -0.71
PTPN7-216ENST00000492977 ZNF80P51504 273 aaPredicted RBP10.65□□□□□ -0.71
PTPN7-216ENST00000492977 Q6ZSV7 163 aa10.65□□□□□ -0.71
PTPN7-216ENST00000492977 C20orf173Q96LM9 149 aa10.65□□□□□ -0.71
PTPN7-216ENST00000492977 LINC00477Q96M19 166 aa10.65□□□□□ -0.71
PTPN7-216ENST00000492977 A0A1B0GUT8 65 aa10.64□□□□□ -0.71
PTPN7-216ENST00000492977 A0A1B0GW15 77 aa10.64□□□□□ -0.71
PTPN7-216ENST00000492977 CAMPP49913 170 aa10.64□□□□□ -0.71
PTPN7-216ENST00000492977 SLAQ13239 276 aa10.64□□□□□ -0.71
PTPN7-216ENST00000492977 RIGQ13278 110 aa10.64□□□□□ -0.71
PTPN7-216ENST00000492977 MXRA5Q9NR99 2828 aa10.64□□□□□ -0.71
PTPN7-216ENST00000492977 GRIFINA4D1Z8 144 aa10.63□□□□□ -0.71
PTPN7-216ENST00000492977 HOXD3P31249 432 aaPredicted RBP10.63□□□□□ -0.71
PTPN7-216ENST00000492977 ID1P41134 155 aa10.63□□□□□ -0.71
PTPN7-216ENST00000492977 SYNJ2BPP57105 145 aa10.63□□□□□ -0.71
PTPN7-216ENST00000492977 KIAA1644Q3SXP7 199 aa10.63□□□□□ -0.71
PTPN7-216ENST00000492977 OR10J3Q5JRS4 329 aa10.63□□□□□ -0.71
PTPN7-216ENST00000492977 OR10D4PQ8NGN7 298 aa10.63□□□□□ -0.71
PTPN7-216ENST00000492977 OR10J6PQ8NGY7 276 aa10.63□□□□□ -0.71
PTPN7-216ENST00000492977 ESM1Q9NQ30 184 aa10.63□□□□□ -0.71
PTPN7-216ENST00000492977 ZNF469Q96JG9 3925 aaPredicted RBP10.63□□□□□ -0.71
PTPN7-216ENST00000492977 FLNAP21333 2647 aaKnown RBP10.62□□□□□ -0.71
PTPN7-216ENST00000492977 AMBPP02760 352 aa10.62□□□□□ -0.71
PTPN7-216ENST00000492977 HIST1H1AQ02539 215 aaPredicted RBP10.62□□□□□ -0.71
PTPN7-216ENST00000492977 KLF5Q13887 457 aaPredicted RBP10.62□□□□□ -0.71
PTPN7-216ENST00000492977 TMEM256Q8N2U0 113 aa10.62□□□□□ -0.71
PTPN7-216ENST00000492977 C4orf3Q8WVX3 66 aa10.62□□□□□ -0.71
PTPN7-216ENST00000492977 WFDC12Q8WWY7 111 aa10.62□□□□□ -0.71
PTPN7-216ENST00000492977 TMEM18Q96B42 140 aa10.62□□□□□ -0.71
PTPN7-216ENST00000492977 BORCS7Q96B45 105 aa10.62□□□□□ -0.71
PTPN7-216ENST00000492977 PACRGQ96M98 296 aaPredicted RBP10.62□□□□□ -0.71
PTPN7-216ENST00000492977 UNC79Q9P2D8 2635 aa10.62□□□□□ -0.71
PTPN7-216ENST00000492977 TLN2Q9Y4G6 2542 aa10.62□□□□□ -0.71
PTPN7-216ENST00000492977 ESDP10768 282 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms