RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 PARD6GQ9BYG4 376 aaPredicted RBP8.69□□□□□ -1.02
COL6A1-205ENST00000492851 TRGV2A0A075B6R0 118 aa8.68□□□□□ -1.02
COL6A1-205ENST00000492851 TRBV7-9A0A0J9YWB2 115 aa8.68□□□□□ -1.02
COL6A1-205ENST00000492851 A0A1W2PPQ1 181 aa8.68□□□□□ -1.02
COL6A1-205ENST00000492851 KLLNB2CW77 178 aa8.68□□□□□ -1.02
COL6A1-205ENST00000492851 C17orf112F2Z3M2 114 aa8.68□□□□□ -1.02
COL6A1-205ENST00000492851 PRAF2O60831 178 aa8.68□□□□□ -1.02
COL6A1-205ENST00000492851 NDUFB4O95168 129 aa8.68□□□□□ -1.02
COL6A1-205ENST00000492851 GPX1P07203 203 aa8.68□□□□□ -1.02
COL6A1-205ENST00000492851 PRB4P10163 310 aaPredicted RBP8.68□□□□□ -1.02
COL6A1-205ENST00000492851 BLNKQ8WV28 456 aa8.68□□□□□ -1.02
COL6A1-205ENST00000492851 FAM19A4Q96LR4 140 aa8.68□□□□□ -1.02
COL6A1-205ENST00000492851 UPK3BQ9BT76 320 aa8.68□□□□□ -1.02
COL6A1-205ENST00000492851 MRPL32Q9BYC8 188 aaKnown RBP8.68□□□□□ -1.02
COL6A1-205ENST00000492851 AGPAT4-IT1Q9H0P7 198 aa8.68□□□□□ -1.02
COL6A1-205ENST00000492851 OR51M1Q9H341 326 aa8.68□□□□□ -1.02
COL6A1-205ENST00000492851 M0R3E3 92 aa8.67□□□□□ -1.02
COL6A1-205ENST00000492851 ZNF324O75467 553 aaPredicted RBP8.67□□□□□ -1.02
COL6A1-205ENST00000492851 NBEAP1P0C6P0 100 aa8.67□□□□□ -1.02
COL6A1-205ENST00000492851 CRISP2P16562 243 aa8.67□□□□□ -1.02
COL6A1-205ENST00000492851 CSN1S1P47710 185 aa8.67□□□□□ -1.02
COL6A1-205ENST00000492851 PKD1P98161 4303 aa8.67□□□□□ -1.02
COL6A1-205ENST00000492851 NHLH2Q02577 135 aa8.67□□□□□ -1.02
COL6A1-205ENST00000492851 SLAQ13239 276 aa8.67□□□□□ -1.02
COL6A1-205ENST00000492851 IBA57Q5T440 356 aaKnown RBP8.67□□□□□ -1.02
COL6A1-205ENST00000492851 A0A0J9YY99 117 aa8.66□□□□□ -1.02
COL6A1-205ENST00000492851 PYYP10082 97 aa8.66□□□□□ -1.02
COL6A1-205ENST00000492851 HOXA5P20719 270 aa8.66□□□□□ -1.02
COL6A1-205ENST00000492851 RNASE4P34096 147 aaKnown RBP8.66□□□□□ -1.02
COL6A1-205ENST00000492851 ERCC8Q13216 396 aa8.66□□□□□ -1.02
COL6A1-205ENST00000492851 ICAM4Q14773 271 aa8.66□□□□□ -1.02
COL6A1-205ENST00000492851 LYPD1Q8N2G4 141 aa8.66□□□□□ -1.02
COL6A1-205ENST00000492851 EXOC3-AS1Q8N2X6 119 aa8.66□□□□□ -1.02
COL6A1-205ENST00000492851 SLC25A2Q9BXI2 301 aa8.66□□□□□ -1.02
COL6A1-205ENST00000492851 WDR61Q9GZS3 305 aaKnown RBP8.66□□□□□ -1.02
COL6A1-205ENST00000492851 GSN-AS1Q9NRJ2 163 aa8.66□□□□□ -1.02
COL6A1-205ENST00000492851 RGS13O14921 159 aa8.65□□□□□ -1.02
COL6A1-205ENST00000492851 UPK1BO75841 260 aa8.65□□□□□ -1.02
COL6A1-205ENST00000492851 PET100P0DJ07 73 aa8.65□□□□□ -1.02
COL6A1-205ENST00000492851 TNP2Q05952 138 aa8.65□□□□□ -1.02
COL6A1-205ENST00000492851 ESRGQ1W209 222 aa8.65□□□□□ -1.02
COL6A1-205ENST00000492851 Q6ZTI0 123 aa8.65□□□□□ -1.02
COL6A1-205ENST00000492851 C11orf72Q8NBR9 251 aa8.65□□□□□ -1.02
COL6A1-205ENST00000492851 THAP6Q8TBB0 222 aa8.65□□□□□ -1.02
COL6A1-205ENST00000492851 FAM167A-AS1Q96KT0 104 aa8.65□□□□□ -1.02
COL6A1-205ENST00000492851 PAXXQ9BUH6 204 aa8.65□□□□□ -1.02
COL6A1-205ENST00000492851 Q9H3A6 140 aa8.65□□□□□ -1.02
COL6A1-205ENST00000492851 TMPRSS5Q9H3S3 457 aa8.65□□□□□ -1.02
COL6A1-205ENST00000492851 ZNF492Q9P255 531 aa8.65□□□□□ -1.02
COL6A1-205ENST00000492851 FUT9Q9Y231 359 aa8.65□□□□□ -1.02
COL6A1-205ENST00000492851 MRPS16Q9Y3D3 137 aaKnown RBP8.65□□□□□ -1.02
COL6A1-205ENST00000492851 KIAA1109Q2LD37 5005 aa8.65□□□□□ -1.02
COL6A1-205ENST00000492851 TRGV1A0A0A0MS02 117 aa8.64□□□□□ -1.03
COL6A1-205ENST00000492851 RBAKDNA6NC62 111 aa8.64□□□□□ -1.03
COL6A1-205ENST00000492851 C16orf90A8MZG2 172 aa8.64□□□□□ -1.03
COL6A1-205ENST00000492851 INMT-MINDY4F8WBC2 141 aa8.64□□□□□ -1.03
COL6A1-205ENST00000492851 SPINK4O60575 86 aa8.64□□□□□ -1.03
COL6A1-205ENST00000492851 ZNF138P52744 262 aa8.64□□□□□ -1.03
COL6A1-205ENST00000492851 TCL1AP56279 114 aa8.64□□□□□ -1.03
COL6A1-205ENST00000492851 CD300CQ08708 224 aa8.64□□□□□ -1.03
COL6A1-205ENST00000492851 BTN1A1Q13410 526 aa8.64□□□□□ -1.03
COL6A1-205ENST00000492851 LRRC37A5PQ49AS3 106 aa8.64□□□□□ -1.03
COL6A1-205ENST00000492851 GCSAMLQ5JQS6 135 aa8.64□□□□□ -1.03
COL6A1-205ENST00000492851 FAM122CQ6P4D5 195 aa8.64□□□□□ -1.03
COL6A1-205ENST00000492851 MIR17HGQ75NE6 70 aa8.64□□□□□ -1.03
COL6A1-205ENST00000492851 SCGB1C1Q8TD33 95 aa8.64□□□□□ -1.03
COL6A1-205ENST00000492851 ARPC5LQ9BPX5 153 aa8.64□□□□□ -1.03
COL6A1-205ENST00000492851 IGHV1OR15-1A0A075B7D0 117 aa8.63□□□□□ -1.03
COL6A1-205ENST00000492851 SIX6O95475 246 aa8.63□□□□□ -1.03
COL6A1-205ENST00000492851 IFNA5P01569 189 aa8.63□□□□□ -1.03
COL6A1-205ENST00000492851 TAS2R45P59539 299 aa8.63□□□□□ -1.03
COL6A1-205ENST00000492851 ZNF575Q86XF7 245 aa8.63□□□□□ -1.03
COL6A1-205ENST00000492851 FXYD5Q96DB9 178 aa8.63□□□□□ -1.03
COL6A1-205ENST00000492851 ST6GAL2Q96JF0 529 aa8.63□□□□□ -1.03
COL6A1-205ENST00000492851 ATP5SQ99766 215 aa8.63□□□□□ -1.03
COL6A1-205ENST00000492851 OR5AC2Q9NZP5 309 aa8.63□□□□□ -1.03
COL6A1-205ENST00000492851 LENEPQ9Y5L5 61 aa8.63□□□□□ -1.03
COL6A1-205ENST00000492851 NACAE9PAV3 2078 aa8.62□□□□□ -1.03
COL6A1-205ENST00000492851 IGKV2-40A0A087WW87 121 aaPredicted RBP8.62□□□□□ -1.03
COL6A1-205ENST00000492851 A0A096LPF7 62 aa8.62□□□□□ -1.03
COL6A1-205ENST00000492851 OR7C2O60412 319 aa8.62□□□□□ -1.03
COL6A1-205ENST00000492851 CDK2AP2O75956 126 aa8.62□□□□□ -1.03
COL6A1-205ENST00000492851 IGKV2D-40P01614 121 aaPredicted RBP8.62□□□□□ -1.03
COL6A1-205ENST00000492851 DEFA1P59665 94 aa8.62□□□□□ -1.03
COL6A1-205ENST00000492851 DEFA3P59666 94 aa8.62□□□□□ -1.03
COL6A1-205ENST00000492851 RANP62826 216 aaKnown RBP8.62□□□□□ -1.03
COL6A1-205ENST00000492851 FAM74A1Q5RGS3 127 aa8.62□□□□□ -1.03
COL6A1-205ENST00000492851 ZFAND2AQ8N6M9 145 aa8.62□□□□□ -1.03
COL6A1-205ENST00000492851 PPP1R1CQ8WVI7 109 aa8.62□□□□□ -1.03
COL6A1-205ENST00000492851 VGLL1Q99990 258 aa8.62□□□□□ -1.03
COL6A1-205ENST00000492851 MARVELD1Q9BSK0 173 aa8.62□□□□□ -1.03
COL6A1-205ENST00000492851 PRO0255Q9UI72 69 aa8.62□□□□□ -1.03
COL6A1-205ENST00000492851 KLF12Q9Y4X4 402 aa8.62□□□□□ -1.03
COL6A1-205ENST00000492851 H0YIZ8 118 aa8.61□□□□□ -1.03
COL6A1-205ENST00000492851 PAX4O43316 350 aa8.61□□□□□ -1.03
COL6A1-205ENST00000492851 SSNA1O43805 119 aa8.61□□□□□ -1.03
COL6A1-205ENST00000492851 OR10J4P0C629 311 aa8.61□□□□□ -1.03
COL6A1-205ENST00000492851 ZNF415Q09FC8 603 aa8.61□□□□□ -1.03
COL6A1-205ENST00000492851 KHDC3LQ587J8 217 aa8.61□□□□□ -1.03
COL6A1-205ENST00000492851 TMED6Q8WW62 240 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms