RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	MPDU1	O75352	247 aa		3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	METTL15P1	P0C7V9	234 aa		3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	HIST1H1E	P10412	219 aa	Known RBP	3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	LEP	P41159	167 aa		3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	CDKN1B	P46527	198 aa		3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	CAMLG	P49069	296 aa		3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	CNN1	P51911	297 aa	Known RBP	3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	PLP1	P60201	277 aa		3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	CYCS	P99999	105 aa	Known RBP	3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	SLA	Q13239	276 aa		3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	ACOT7L	Q6ZUV0	252 aa		3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	LINC00305	Q7Z4B0	112 aa		3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	OR8A1	Q8NGG7	326 aa		3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	TMEM170A	Q8WVE7	144 aa		3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	RPUSD4	Q96CM3	377 aa	Known RBP	3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	SLC25A31	Q9H0C2	315 aa		3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	ARV1	Q9H2C2	271 aa		3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	KCNIP2	Q9NS61	270 aa		3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	PRELID1	Q9Y255	219 aa		3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	LY96	Q9Y6Y9	160 aa		3.56	□□□□□ -1.84
SEC13-219	ENST00000492602	TRGV2	A0A075B6R0	118 aa		3.55	□□□□□ -1.84
SEC13-219	ENST00000492602	IGKV1D-37	A0A075B6S9	117 aa		3.55	□□□□□ -1.84
SEC13-219	ENST00000492602		A0A096LPF7	62 aa		3.55	□□□□□ -1.84
SEC13-219	ENST00000492602	FAM240B	A0A1B0GVZ2	78 aa		3.55	□□□□□ -1.84
SEC13-219	ENST00000492602	PMS2P5	A8MQ11	134 aa		3.55	□□□□□ -1.84
SEC13-219	ENST00000492602		F6UB75	175 aa		3.55	□□□□□ -1.84
SEC13-219	ENST00000492602	AGPAT2	O15120	278 aa		3.55	□□□□□ -1.84
SEC13-219	ENST00000492602	GATA2	P23769	480 aa	Predicted RBP	3.55	□□□□□ -1.84
SEC13-219	ENST00000492602	S100A10	P60903	97 aa		3.55	□□□□□ -1.84
SEC13-219	ENST00000492602	SPINK13	Q1W4C9	94 aa		3.55	□□□□□ -1.84
SEC13-219	ENST00000492602	OR11H7	Q8NGC8	314 aa		3.55	□□□□□ -1.84
SEC13-219	ENST00000492602	MITD1	Q8WV92	249 aa		3.55	□□□□□ -1.84
SEC13-219	ENST00000492602	C2orf50	Q96LR7	162 aa		3.55	□□□□□ -1.84
SEC13-219	ENST00000492602	LINC00477	Q96M19	166 aa		3.55	□□□□□ -1.84
SEC13-219	ENST00000492602	SLC25A32	Q9H2D1	315 aa		3.55	□□□□□ -1.84
SEC13-219	ENST00000492602	SLC39A9	Q9NUM3	307 aa		3.55	□□□□□ -1.84
SEC13-219	ENST00000492602	UQCC1	Q9NVA1	299 aa		3.55	□□□□□ -1.84
SEC13-219	ENST00000492602	LSM5	Q9Y4Y9	91 aa	Known RBP	3.55	□□□□□ -1.84
SEC13-219	ENST00000492602	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	3.54	□□□□□ -1.84
SEC13-219	ENST00000492602		A0A087X0K7	114 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	PLAC8L1	A1L4L8	177 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	C17orf112	F2Z3M2	114 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602		H3BNG1	76 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602		H3BRN7	92 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602		K7EPK0	472 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602		M0R2Z0	102 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	LYRM1	O43325	122 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	SLC25A5	P05141	298 aa	Known RBP	3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	GPX1	P07203	203 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	PET100	P0DJ07	73 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	CXCL3	P19876	107 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	AZU1	P20160	251 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	EVI2A	P22794	236 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	BAX	Q07812	192 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	SLC38A11	Q08AI6	406 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	ASAH1	Q13510	395 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	FAM74A1	Q5RGS3	127 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	TMEM78	Q5T7P6	136 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	NRARP	Q7Z6K4	114 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	RNF182	Q8N6D2	247 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	ZNF680	Q8NEM1	530 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	SCGB1C1	Q8TD33	95 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	ZNF431	Q8TF32	576 aa	Predicted RBP	3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	TMEM263	Q8WUH6	116 aa	Known RBP	3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	S100Z	Q8WXG8	99 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	PYGO2	Q9BRQ0	406 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	SH3BGRL3	Q9H299	93 aa		3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	NOP10	Q9NPE3	64 aa	Known RBP	3.54	□□□□□ -1.84
SEC13-219	ENST00000492602	TRAV12-2	A0A075B6T6	113 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	IGKV1OR2-108	A0A075B7D4	117 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	C7orf66	A4D0T2	115 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	SOCS3	O14543	225 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	MBP	P02686	304 aa	Predicted RBP	3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	TCRB	P04435	133 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	H2AFB2	P0C5Z0	115 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	RPL29	P47914	159 aa	Known RBP	3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	SULT1A1	P50225	295 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	TAS2R45	P59539	299 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	DEFA1	P59665	94 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	DEFA3	P59666	94 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	PDE6H	Q13956	83 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	IGFL4	Q6B9Z1	124 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	TMEM14EP	Q6UXP3	125 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	ENKUR	Q8TC29	256 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	TRIM63	Q969Q1	353 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	MRPL53	Q96EL3	112 aa	Known RBP	3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	C20orf173	Q96LM9	149 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	LINC01600	Q96MT4	127 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	ATP5S	Q99766	215 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	ARPC5L	Q9BPX5	153 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	CCDC32	Q9BV29	185 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	SRR	Q9GZT4	340 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	ZNF331	Q9NQX6	463 aa	Predicted RBP	3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	FLVCR2	Q9UPI3	526 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	RCL1	Q9Y2P8	373 aa	Known RBP	3.53	□□□□□ -1.84
SEC13-219	ENST00000492602		V9GYH0	126 aa		3.53	□□□□□ -1.84
SEC13-219	ENST00000492602	TRAV6	A0A075B6T7	132 aa		3.52	□□□□□ -1.85
SEC13-219	ENST00000492602	TRAV5	A0A0B4J249	113 aa		3.52	□□□□□ -1.85
SEC13-219	ENST00000492602	TRAV12-3	A0A0B4J271	114 aa		3.52	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms