RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 LINC00477Q96M19 166 aa5.11□□□□□ -1.59
PDLIM1-204ENST00000492511 PSMG3Q9BT73 122 aaPredicted RBP5.11□□□□□ -1.59
PDLIM1-204ENST00000492511 TMEM208Q9BTX3 173 aa5.11□□□□□ -1.59
PDLIM1-204ENST00000492511 PPP1R14DQ9NXH3 145 aa5.11□□□□□ -1.59
PDLIM1-204ENST00000492511 YTHDF2Q9Y5A9 579 aaKnown RBP5.11□□□□□ -1.59
PDLIM1-204ENST00000492511 DYNC1H1Q14204 4646 aaKnown RBP5.11□□□□□ -1.59
PDLIM1-204ENST00000492511 DEFB131BA0A096LNP1 70 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 TRAV10A0A0B4J240 114 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 TRAV12-3A0A0B4J271 114 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 KLLNB2CW77 178 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 IGLL5B9A064 214 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 J3KRW8 73 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 STAG3L2P0CL84 134 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 STAG3L3P0CL85 134 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 CRISP2P16562 243 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 LEPP41159 167 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 TAS2R45P59539 299 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 UBE2L3P68036 154 aaKnown RBP5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 SERF2P84101 59 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 CD300CQ08708 224 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 ZNF726P1Q15940 193 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 KHDC3LQ587J8 217 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 PRR9Q5T870 116 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 LYPD1Q8N2G4 141 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 TMEM256Q8N2U0 113 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 ZFAND2AQ8N6M9 145 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 RNASE8Q8TDE3 154 aaKnown RBP5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 RAB24Q969Q5 203 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 C20orf144Q9BQM9 153 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 NIPSNAP3BQ9BS92 247 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 Q9H3A6 140 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 AAMDCQ9H7C9 122 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 ZNF492Q9P255 531 aa5.1□□□□□ -1.59
PDLIM1-204ENST00000492511 IGHV4-4A0A075B6R2 117 aa5.09□□□□□ -1.59
PDLIM1-204ENST00000492511 A0A1W2PPV4 95 aa5.09□□□□□ -1.59
PDLIM1-204ENST00000492511 PGPA6NDG6 321 aa5.09□□□□□ -1.59
PDLIM1-204ENST00000492511 DIRC3C9JPN6 131 aa5.09□□□□□ -1.59
PDLIM1-204ENST00000492511 H7BYZ3 331 aa5.09□□□□□ -1.59
PDLIM1-204ENST00000492511 ARPC5O15511 151 aa5.09□□□□□ -1.59
PDLIM1-204ENST00000492511 LY6G6CO95867 125 aa5.09□□□□□ -1.59
PDLIM1-204ENST00000492511 SLC25A5P05141 298 aaKnown RBP5.09□□□□□ -1.59
PDLIM1-204ENST00000492511 ARL14EPLP0DKL9 152 aa5.09□□□□□ -1.59
PDLIM1-204ENST00000492511 HTN1P15515 57 aa5.09□□□□□ -1.59
PDLIM1-204ENST00000492511 CDC34P49427 236 aaPredicted RBP5.09□□□□□ -1.59
PDLIM1-204ENST00000492511 BTN1A1Q13410 526 aa5.09□□□□□ -1.59
PDLIM1-204ENST00000492511 LGALS9CQ6DKI2 356 aa5.09□□□□□ -1.59
PDLIM1-204ENST00000492511 PQLC2Q6ZP29 291 aa5.09□□□□□ -1.59
PDLIM1-204ENST00000492511 OTORQ9NRC9 128 aa5.09□□□□□ -1.59
PDLIM1-204ENST00000492511 C7orf71A4D174 169 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 RBAKDNA6NC62 111 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 LYRM9A8MSI8 78 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 HMSDA8MTL9 139 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 TAAR5O14804 337 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 MBP02144 154 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 NMBP08949 121 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 GCHFRP30047 84 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 RNASE4P34096 147 aaKnown RBP5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 ZNF138P52744 262 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 TCTAP57738 103 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 TMEM78Q5T7P6 136 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 ZNF493Q6ZR52 646 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 KCNRGQ8N5I3 272 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 Q8TAT8 98 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 TMEM263Q8WUH6 116 aaKnown RBP5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 GNPNAT1Q96EK6 184 aaPredicted RBP5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 TVP23CQ96ET8 276 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 C16orf74Q96GX8 76 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 ST6GAL2Q96JF0 529 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 HYLS1Q96M11 299 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 LINC00467Q9BRT7 94 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 PKD1P98161 4303 aa5.08□□□□□ -1.6
PDLIM1-204ENST00000492511 HECTD4Q9Y4D8 3996 aa5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 BORCS7-ASMTA0A0B4J1R7 106 aa5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 TRBV7-9A0A0J9YWB2 115 aa5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 TEX48A0A1B0GUV7 120 aa5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 GPX1P07203 203 aa5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 CSN1S1P47710 185 aa5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 DAD1P61803 113 aa5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 GNG5P63218 68 aa5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 ZNF345Q14585 488 aa5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 Q6ZNX1 250 aa5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 ARL6IP6Q8N6S5 226 aa5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 LINC00612Q8N6U2 182 aa5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 C11orf72Q8NBR9 251 aa5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 RXFP4Q8TDU9 374 aa5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 PYGO2Q9BRQ0 406 aa5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 KRTAP17-1Q9BYP8 105 aa5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 ACTR3CQ9C0K3 210 aaPredicted RBP5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 NOP10Q9NPE3 64 aaKnown RBP5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 TP53TG3Q9ULZ0 132 aa5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 TIMM8BQ9Y5J9 83 aaPredicted RBP5.07□□□□□ -1.6
PDLIM1-204ENST00000492511 TRAV8-1A0A0A6YYK1 113 aa5.06□□□□□ -1.6
PDLIM1-204ENST00000492511 CBY3A6NI87 242 aa5.06□□□□□ -1.6
PDLIM1-204ENST00000492511 GGTLC3B5MD39 225 aa5.06□□□□□ -1.6
PDLIM1-204ENST00000492511 CXorf1O96002 111 aa5.06□□□□□ -1.6
PDLIM1-204ENST00000492511 DEFB130BP0DP73 79 aa5.06□□□□□ -1.6
PDLIM1-204ENST00000492511 DEFB130AP0DP74 79 aa5.06□□□□□ -1.6
PDLIM1-204ENST00000492511 HTN3P15516 51 aa5.06□□□□□ -1.6
PDLIM1-204ENST00000492511 FHITP49789 147 aa5.06□□□□□ -1.6
PDLIM1-204ENST00000492511 ANXA2RQ3ZCQ2 193 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms