RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 IGKV1-39P01597 117 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 IGKV1D-39P04432 117 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 IL6RP08887 468 aaPredicted RBP3.55□□□□□ -1.84
TRA2B-215ENST00000492417 ESDP10768 282 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 PAX2Q02962 417 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 WFDC12Q8WWY7 111 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 KLK15Q9H2R5 256 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 COX11Q9Y6N1 276 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 RELNP78509 3460 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 DLX6P56179 175 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 ODF1Q14990 250 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 ZFAND6Q6FIF0 208 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 LY6G5BQ8NDX9 201 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 MBD6Q96DN6 1003 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 ZNF479Q96JC4 524 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 RNF5Q99942 180 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 A0A1W2PS18 150 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 TSPOP30536 169 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 GAGE13Q4V321 117 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 SAMD5Q5TGI4 173 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 LCN12Q6JVE5 192 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 C1orf229Q6ZS94 237 aaPredicted RBP3.55□□□□□ -1.84
TRA2B-215ENST00000492417 C8orf86Q6ZUL3 223 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 GATAD1Q8WUU5 269 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 TNFRSF13BO14836 293 aaPredicted RBP3.55□□□□□ -1.84
TRA2B-215ENST00000492417 PROP1O75360 226 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 TMEM50AO95807 157 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 GHRHP01286 108 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 SPAG8Q99932 426 aaPredicted RBP3.55□□□□□ -1.84
TRA2B-215ENST00000492417 C20orf144Q9BQM9 153 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 NPCDR1Q9BY65 106 aa3.55□□□□□ -1.84
TRA2B-215ENST00000492417 ITPR1Q14643 2758 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 A0A1B0GUT8 65 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 IZUMO1RA6ND01 250 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 C3orf79P0CE67 100 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 CGB3P0DN86 165 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 CGB7P0DN87 165 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 LGALS3P17931 250 aaKnown RBP3.54□□□□□ -1.84
TRA2B-215ENST00000492417 RPL15P61313 204 aaKnown RBP3.54□□□□□ -1.84
TRA2B-215ENST00000492417 WT1-ASQ06250 92 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 HSD52Q0P140 79 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 GAGE1Q13065 139 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 C10orf99Q6UWK7 81 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 STPG3Q8N7X2 389 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 Q8N9W7 124 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 OCC1Q8TAD7 63 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 C19orf24Q9BVV8 132 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 WFDC1Q9HC57 220 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 HCFC1P51610 2035 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 IGHV7-81A0A0B4J1V7 117 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 VWC2LB2RUY7 222 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 C9JQL5 133 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 ID3Q02535 119 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 CD69Q07108 199 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 FOXL1Q12952 345 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 NMSQ5H8A3 153 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 FAM71F2Q6NXP2 309 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 LINC00305Q7Z4B0 112 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 ODF3L1Q8IXM7 274 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 GLMPQ8WWB7 406 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 PRELID3AQ96N28 172 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 SSBP4Q9BWG4 385 aaPredicted RBP3.54□□□□□ -1.84
TRA2B-215ENST00000492417 RNASE7Q9H1E1 156 aaKnown RBP3.54□□□□□ -1.84
TRA2B-215ENST00000492417 MS4A6AQ9H2W1 248 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 POLR3KQ9Y2Y1 108 aaPredicted RBP3.54□□□□□ -1.84
TRA2B-215ENST00000492417 HIGD1CA8MV81 97 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 A8MWV9 139 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 RAB9AP51151 201 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 OR10J3Q5JRS4 329 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 Q6ZS46 218 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 GNB1LQ9BYB4 327 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 ZFAND3Q9H8U3 227 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 RFNGQ9Y644 331 aa3.54□□□□□ -1.84
TRA2B-215ENST00000492417 TRBV20OR9-2A0A075B6H5 130 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 A0A087X0K7 114 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 MUC21A0A0G2JKD1 596 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 MUC21A0A140T8X8 626 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 A0A1B0GW64 132 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 ATP5LO75964 103 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 SPINK8P0C7L1 97 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 GCSAMLQ5JQS6 135 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 MUC21Q5SSG8 566 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 GOLT1AQ6ZVE7 132 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 HAPLN4Q86UW8 402 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 LRTM2Q8N967 370 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 TMEM158Q8WZ71 300 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 OSTCQ9NRP0 149 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 PEMTQ9UBM1 199 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 NACAE9PAV3 2078 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 E7EUB6 86 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 FCN3O75636 299 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 RNASE2P10153 161 aaKnown RBP3.53□□□□□ -1.84
TRA2B-215ENST00000492417 ID1P41134 155 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 RPS20P60866 119 aaKnown RBP3.53□□□□□ -1.84
TRA2B-215ENST00000492417 IGFL4Q6B9Z1 124 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 EBLN2Q6P2I7 272 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 C5orf56Q8N8D9 126 aa3.53□□□□□ -1.84
TRA2B-215ENST00000492417 RNASEH2CQ8TDP1 164 aaKnown RBP3.53□□□□□ -1.84
TRA2B-215ENST00000492417 MRPS16Q9Y3D3 137 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms