RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	TRAV5	A0A0B4J249	113 aa		10.72	□□□□□ -0.69
MRPL55-231	ENST00000492170	SLC17A3	O00476	420 aa		10.72	□□□□□ -0.69
MRPL55-231	ENST00000492170	TNP2	Q05952	138 aa		10.72	□□□□□ -0.69
MRPL55-231	ENST00000492170	ZNF266	Q14584	549 aa		10.72	□□□□□ -0.69
MRPL55-231	ENST00000492170	SCGB1C1	Q8TD33	95 aa		10.72	□□□□□ -0.69
MRPL55-231	ENST00000492170	TMEM14C	Q9P0S9	112 aa		10.72	□□□□□ -0.69
MRPL55-231	ENST00000492170	HSPG2	P98160	4391 aa		10.72	□□□□□ -0.69
MRPL55-231	ENST00000492170	FXYD6-FXYD2	A0A087WZ82	144 aa		10.71	□□□□□ -0.69
MRPL55-231	ENST00000492170	C16orf90	A8MZG2	172 aa		10.71	□□□□□ -0.69
MRPL55-231	ENST00000492170		H3BQ15	152 aa		10.71	□□□□□ -0.69
MRPL55-231	ENST00000492170		H3BTX0	84 aa		10.71	□□□□□ -0.69
MRPL55-231	ENST00000492170	GFI1B	Q5VTD9	330 aa		10.71	□□□□□ -0.69
MRPL55-231	ENST00000492170	SAT2	Q96F10	170 aa	Predicted RBP	10.71	□□□□□ -0.69
MRPL55-231	ENST00000492170	FAM167A-AS1	Q96KT0	104 aa		10.71	□□□□□ -0.69
MRPL55-231	ENST00000492170	MRPL32	Q9BYC8	188 aa	Known RBP	10.71	□□□□□ -0.69
MRPL55-231	ENST00000492170	TIMM9	Q9Y5J7	89 aa		10.71	□□□□□ -0.69
MRPL55-231	ENST00000492170	LRP1B	Q9NZR2	4599 aa		10.7	□□□□□ -0.7
MRPL55-231	ENST00000492170	ZNF253	O75346	499 aa		10.7	□□□□□ -0.7
MRPL55-231	ENST00000492170	OR5I1	Q13606	314 aa		10.7	□□□□□ -0.7
MRPL55-231	ENST00000492170	KIR3DS1	Q14943	382 aa		10.7	□□□□□ -0.7
MRPL55-231	ENST00000492170	GUK1	Q16774	197 aa		10.7	□□□□□ -0.7
MRPL55-231	ENST00000492170	SSX7	Q7RTT5	188 aa		10.7	□□□□□ -0.7
MRPL55-231	ENST00000492170	INO80E	Q8NBZ0	244 aa	Predicted RBP	10.7	□□□□□ -0.7
MRPL55-231	ENST00000492170	GNPNAT1	Q96EK6	184 aa	Predicted RBP	10.7	□□□□□ -0.7
MRPL55-231	ENST00000492170	SLC25A2	Q9BXI2	301 aa		10.7	□□□□□ -0.7
MRPL55-231	ENST00000492170	FUT9	Q9Y231	359 aa		10.7	□□□□□ -0.7
MRPL55-231	ENST00000492170	TRAV26-1	A0A087WT03	109 aa		10.69	□□□□□ -0.7
MRPL55-231	ENST00000492170	SNURFL	B1AK76	121 aa		10.69	□□□□□ -0.7
MRPL55-231	ENST00000492170	PRAC2	D3DTV9	90 aa		10.69	□□□□□ -0.7
MRPL55-231	ENST00000492170	M6PR	P20645	277 aa		10.69	□□□□□ -0.7
MRPL55-231	ENST00000492170	LEP	P41159	167 aa		10.69	□□□□□ -0.7
MRPL55-231	ENST00000492170	FFAR4	Q5NUL3	377 aa		10.69	□□□□□ -0.7
MRPL55-231	ENST00000492170	MIR17HG	Q75NE6	70 aa		10.69	□□□□□ -0.7
MRPL55-231	ENST00000492170	LINC00612	Q8N6U2	182 aa		10.69	□□□□□ -0.7
MRPL55-231	ENST00000492170	RXFP4	Q8TDU9	374 aa		10.69	□□□□□ -0.7
MRPL55-231	ENST00000492170	ODF3	Q96PU9	254 aa		10.69	□□□□□ -0.7
MRPL55-231	ENST00000492170	ZNF586	Q9NXT0	402 aa		10.69	□□□□□ -0.7
MRPL55-231	ENST00000492170	GAGE12B	A1L429	117 aa		10.68	□□□□□ -0.7
MRPL55-231	ENST00000492170		J3KRW8	73 aa		10.68	□□□□□ -0.7
MRPL55-231	ENST00000492170	GAGE7	O76087	117 aa		10.68	□□□□□ -0.7
MRPL55-231	ENST00000492170	GAGE12F	P0CL80	117 aa		10.68	□□□□□ -0.7
MRPL55-231	ENST00000492170	GAGE12G	P0CL81	117 aa		10.68	□□□□□ -0.7
MRPL55-231	ENST00000492170	GAGE12I	P0CL82	117 aa		10.68	□□□□□ -0.7
MRPL55-231	ENST00000492170	HIST1H1E	P10412	219 aa	Known RBP	10.68	□□□□□ -0.7
MRPL55-231	ENST00000492170	TTC32	Q5I0X7	151 aa		10.68	□□□□□ -0.7
MRPL55-231	ENST00000492170		Q6ZNX1	250 aa		10.68	□□□□□ -0.7
MRPL55-231	ENST00000492170	OR2G3	Q8NGZ4	309 aa		10.68	□□□□□ -0.7
MRPL55-231	ENST00000492170	ZNF503	Q96F45	646 aa		10.68	□□□□□ -0.7
MRPL55-231	ENST00000492170	PSMG3	Q9BT73	122 aa	Predicted RBP	10.68	□□□□□ -0.7
MRPL55-231	ENST00000492170		Q9H8V8	135 aa		10.68	□□□□□ -0.7
MRPL55-231	ENST00000492170	TRBV19	A0A075B6N1	114 aa		10.67	□□□□□ -0.7
MRPL55-231	ENST00000492170	PYY	P10082	97 aa		10.67	□□□□□ -0.7
MRPL55-231	ENST00000492170	PDE6H	Q13956	83 aa		10.67	□□□□□ -0.7
MRPL55-231	ENST00000492170	PYGO2	Q9BRQ0	406 aa		10.67	□□□□□ -0.7
MRPL55-231	ENST00000492170	TRAV12-3	A0A0B4J271	114 aa		10.66	□□□□□ -0.7
MRPL55-231	ENST00000492170		A0A0J9YY99	117 aa		10.66	□□□□□ -0.7
MRPL55-231	ENST00000492170	NPIPB6	E9PJ23	425 aa		10.66	□□□□□ -0.7
MRPL55-231	ENST00000492170	SMLR1	H3BR10	107 aa		10.66	□□□□□ -0.7
MRPL55-231	ENST00000492170	ARPC5	O15511	151 aa		10.66	□□□□□ -0.7
MRPL55-231	ENST00000492170	NDUFB4	O95168	129 aa		10.66	□□□□□ -0.7
MRPL55-231	ENST00000492170	CT45A10	P0DMU9	189 aa		10.66	□□□□□ -0.7
MRPL55-231	ENST00000492170	ATP6V0C	P27449	155 aa		10.66	□□□□□ -0.7
MRPL55-231	ENST00000492170	ZNF345	Q14585	488 aa		10.66	□□□□□ -0.7
MRPL55-231	ENST00000492170	HSD17B11	Q8NBQ5	300 aa		10.66	□□□□□ -0.7
MRPL55-231	ENST00000492170	OR51M1	Q9H341	326 aa		10.66	□□□□□ -0.7
MRPL55-231	ENST00000492170		H3BNG1	76 aa		10.65	□□□□□ -0.7
MRPL55-231	ENST00000492170	CDK2AP2	O75956	126 aa		10.65	□□□□□ -0.7
MRPL55-231	ENST00000492170	HOXA5	P20719	270 aa		10.65	□□□□□ -0.7
MRPL55-231	ENST00000492170	SERF2	P84101	59 aa		10.65	□□□□□ -0.7
MRPL55-231	ENST00000492170	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.65	□□□□□ -0.7
MRPL55-231	ENST00000492170	RPL7L1	Q6DKI1	246 aa	Known RBP	10.65	□□□□□ -0.7
MRPL55-231	ENST00000492170	OR11H4	Q8NGC9	324 aa		10.65	□□□□□ -0.7
MRPL55-231	ENST00000492170	FXYD5	Q96DB9	178 aa		10.65	□□□□□ -0.7
MRPL55-231	ENST00000492170	MRPL53	Q96EL3	112 aa	Known RBP	10.65	□□□□□ -0.7
MRPL55-231	ENST00000492170	UPK3B	Q9BT76	320 aa		10.65	□□□□□ -0.7
MRPL55-231	ENST00000492170	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.64	□□□□□ -0.71
MRPL55-231	ENST00000492170	HMSD	A8MTL9	139 aa		10.64	□□□□□ -0.71
MRPL55-231	ENST00000492170	TAAR5	O14804	337 aa		10.64	□□□□□ -0.71
MRPL55-231	ENST00000492170	SLC25A5	P05141	298 aa	Known RBP	10.64	□□□□□ -0.71
MRPL55-231	ENST00000492170	RAB2A	P61019	212 aa		10.64	□□□□□ -0.71
MRPL55-231	ENST00000492170	DAZ2	Q13117	558 aa	Known RBP	10.64	□□□□□ -0.71
MRPL55-231	ENST00000492170	KHDC3L	Q587J8	217 aa		10.64	□□□□□ -0.71
MRPL55-231	ENST00000492170	ZNF680	Q8NEM1	530 aa		10.64	□□□□□ -0.71
MRPL55-231	ENST00000492170	PAXX	Q9BUH6	204 aa		10.64	□□□□□ -0.71
MRPL55-231	ENST00000492170		Q9H3A6	140 aa		10.64	□□□□□ -0.71
MRPL55-231	ENST00000492170	TMPRSS5	Q9H3S3	457 aa		10.64	□□□□□ -0.71
MRPL55-231	ENST00000492170	C7orf71	A4D174	169 aa		10.63	□□□□□ -0.71
MRPL55-231	ENST00000492170	NBEAP1	P0C6P0	100 aa		10.63	□□□□□ -0.71
MRPL55-231	ENST00000492170	TAS2R45	P59539	299 aa		10.63	□□□□□ -0.71
MRPL55-231	ENST00000492170		Q6ZTI0	123 aa		10.63	□□□□□ -0.71
MRPL55-231	ENST00000492170	KCNRG	Q8N5I3	272 aa		10.63	□□□□□ -0.71
MRPL55-231	ENST00000492170	ST6GAL2	Q96JF0	529 aa		10.63	□□□□□ -0.71
MRPL55-231	ENST00000492170	KRTAP4-5	Q9BYR2	181 aa		10.63	□□□□□ -0.71
MRPL55-231	ENST00000492170	SH3BGRL3	Q9H299	93 aa		10.63	□□□□□ -0.71
MRPL55-231	ENST00000492170	CYTL1	Q9NRR1	136 aa		10.63	□□□□□ -0.71
MRPL55-231	ENST00000492170	PRELID1	Q9Y255	219 aa		10.63	□□□□□ -0.71
MRPL55-231	ENST00000492170	MRPS16	Q9Y3D3	137 aa	Known RBP	10.63	□□□□□ -0.71
MRPL55-231	ENST00000492170	TRGV2	A0A075B6R0	118 aa		10.62	□□□□□ -0.71
MRPL55-231	ENST00000492170		A0A1W2PPQ1	181 aa		10.62	□□□□□ -0.71
MRPL55-231	ENST00000492170		M0R3E3	92 aa		10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms