RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 PTTG2Q9NZH5 202 aa19.37■□□□□ 0.69
HOXB3-211ENST00000490677 CD300CQ08708 224 aa19.36■□□□□ 0.69
HOXB3-211ENST00000490677 CLINT1Q14677 625 aa19.36■□□□□ 0.69
HOXB3-211ENST00000490677 C1orf134Q5TEV5 83 aa19.36■□□□□ 0.69
HOXB3-211ENST00000490677 C9orf47Q6ZRZ4 202 aa19.36■□□□□ 0.69
HOXB3-211ENST00000490677 TIMM9Q9Y5J7 89 aa19.36■□□□□ 0.69
HOXB3-211ENST00000490677 GAGE12BA1L429 117 aa19.35■□□□□ 0.69
HOXB3-211ENST00000490677 C7orf71A4D174 169 aa19.35■□□□□ 0.69
HOXB3-211ENST00000490677 GAGE7O76087 117 aa19.35■□□□□ 0.69
HOXB3-211ENST00000490677 RLN2P04090 185 aa19.35■□□□□ 0.69
HOXB3-211ENST00000490677 GAGE12FP0CL80 117 aa19.35■□□□□ 0.69
HOXB3-211ENST00000490677 GAGE12GP0CL81 117 aa19.35■□□□□ 0.69
HOXB3-211ENST00000490677 GAGE12IP0CL82 117 aa19.35■□□□□ 0.69
HOXB3-211ENST00000490677 CRISP2P16562 243 aa19.35■□□□□ 0.69
HOXB3-211ENST00000490677 DAZ2Q13117 558 aaKnown RBP19.35■□□□□ 0.69
HOXB3-211ENST00000490677 FXYD5Q96DB9 178 aa19.35■□□□□ 0.69
HOXB3-211ENST00000490677 LINC00477Q96M19 166 aa19.35■□□□□ 0.69
HOXB3-211ENST00000490677 LINC00467Q9BRT7 94 aa19.35■□□□□ 0.69
HOXB3-211ENST00000490677 BTN1A1Q13410 526 aa19.34■□□□□ 0.69
HOXB3-211ENST00000490677 ICAM4Q14773 271 aa19.34■□□□□ 0.69
HOXB3-211ENST00000490677 Q6ZTI0 123 aa19.34■□□□□ 0.69
HOXB3-211ENST00000490677 PPP1R1CQ8WVI7 109 aa19.34■□□□□ 0.69
HOXB3-211ENST00000490677 TRAV26-1A0A087WT03 109 aa19.33■□□□□ 0.68
HOXB3-211ENST00000490677 NBDYA0A0U1RRE5 68 aa19.33■□□□□ 0.68
HOXB3-211ENST00000490677 SNURFLB1AK76 121 aa19.33■□□□□ 0.68
HOXB3-211ENST00000490677 CYCSP99999 105 aaKnown RBP19.33■□□□□ 0.68
HOXB3-211ENST00000490677 PRR9Q5T870 116 aa19.33■□□□□ 0.68
HOXB3-211ENST00000490677 ZFAND2AQ8N6M9 145 aa19.33■□□□□ 0.68
HOXB3-211ENST00000490677 ZNF503Q96F45 646 aa19.33■□□□□ 0.68
HOXB3-211ENST00000490677 VGLL1Q99990 258 aa19.33■□□□□ 0.68
HOXB3-211ENST00000490677 IGKV2-40A0A087WW87 121 aaPredicted RBP19.32■□□□□ 0.68
HOXB3-211ENST00000490677 IGKV2D-40P01614 121 aaPredicted RBP19.32■□□□□ 0.68
HOXB3-211ENST00000490677 NBEAP1P0C6P0 100 aa19.32■□□□□ 0.68
HOXB3-211ENST00000490677 OR51M1Q9H341 326 aa19.32■□□□□ 0.68
HOXB3-211ENST00000490677 M6PRP20645 277 aa19.31■□□□□ 0.68
HOXB3-211ENST00000490677 CCL18P55774 89 aa19.31■□□□□ 0.68
HOXB3-211ENST00000490677 OR5I1Q13606 314 aa19.31■□□□□ 0.68
HOXB3-211ENST00000490677 SOHLH1Q5JUK2 328 aa19.31■□□□□ 0.68
HOXB3-211ENST00000490677 Q6ZQT7 251 aa19.31■□□□□ 0.68
HOXB3-211ENST00000490677 RXFP4Q8TDU9 374 aa19.31■□□□□ 0.68
HOXB3-211ENST00000490677 MRPL32Q9BYC8 188 aaKnown RBP19.31■□□□□ 0.68
HOXB3-211ENST00000490677 TMPRSS5Q9H3S3 457 aa19.31■□□□□ 0.68
HOXB3-211ENST00000490677 AAMDCQ9H7C9 122 aa19.31■□□□□ 0.68
HOXB3-211ENST00000490677 GSN-AS1Q9NRJ2 163 aa19.31■□□□□ 0.68
HOXB3-211ENST00000490677 FUT9Q9Y231 359 aa19.31■□□□□ 0.68
HOXB3-211ENST00000490677 MED14OSP0DP75 135 aa19.3■□□□□ 0.68
HOXB3-211ENST00000490677 ANXA2RQ3ZCQ2 193 aa19.3■□□□□ 0.68
HOXB3-211ENST00000490677 FAM122CQ6P4D5 195 aa19.3■□□□□ 0.68
HOXB3-211ENST00000490677 SSX7Q7RTT5 188 aa19.3■□□□□ 0.68
HOXB3-211ENST00000490677 GNPNAT1Q96EK6 184 aaPredicted RBP19.3■□□□□ 0.68
HOXB3-211ENST00000490677 PHYHIPLQ96FC7 376 aa19.3■□□□□ 0.68
HOXB3-211ENST00000490677 LRP1BQ9NZR2 4599 aa19.3■□□□□ 0.68
HOXB3-211ENST00000490677 MPC2O95563 127 aa19.29■□□□□ 0.68
HOXB3-211ENST00000490677 NMBP08949 121 aa19.29■□□□□ 0.68
HOXB3-211ENST00000490677 OR10J4P0C629 311 aa19.29■□□□□ 0.68
HOXB3-211ENST00000490677 C18orf15Q96N68 181 aa19.29■□□□□ 0.68
HOXB3-211ENST00000490677 ATP5SQ99766 215 aa19.29■□□□□ 0.68
HOXB3-211ENST00000490677 PAXXQ9BUH6 204 aa19.29■□□□□ 0.68
HOXB3-211ENST00000490677 KCNIP2Q9NS61 270 aa19.29■□□□□ 0.68
HOXB3-211ENST00000490677 ZNF492Q9P255 531 aa19.29■□□□□ 0.68
HOXB3-211ENST00000490677 HSPB11Q9Y547 144 aa19.29■□□□□ 0.68
HOXB3-211ENST00000490677 A0A0J9YY99 117 aa19.28■□□□□ 0.68
HOXB3-211ENST00000490677 H3BNG1 76 aa19.28■□□□□ 0.68
HOXB3-211ENST00000490677 RNASE4P34096 147 aaKnown RBP19.28■□□□□ 0.68
HOXB3-211ENST00000490677 ZNF680Q8NEM1 530 aa19.28■□□□□ 0.68
HOXB3-211ENST00000490677 HSPG2P98160 4391 aa19.28■□□□□ 0.68
HOXB3-211ENST00000490677 TNP2Q05952 138 aa19.27■□□□□ 0.68
HOXB3-211ENST00000490677 EIF4E3Q8N5X7 224 aaKnown RBP19.27■□□□□ 0.68
HOXB3-211ENST00000490677 VSIG2Q96IQ7 327 aa19.26■□□□□ 0.67
HOXB3-211ENST00000490677 KRTAP1-5Q9BYS1 174 aa19.26■□□□□ 0.67
HOXB3-211ENST00000490677 TP53TG3Q9ULZ0 132 aa19.26■□□□□ 0.67
HOXB3-211ENST00000490677 KLF12Q9Y4X4 402 aa19.26■□□□□ 0.67
HOXB3-211ENST00000490677 GPX1P07203 203 aa19.25■□□□□ 0.67
HOXB3-211ENST00000490677 TCL1AP56279 114 aa19.25■□□□□ 0.67
HOXB3-211ENST00000490677 ESRGQ1W209 222 aa19.25■□□□□ 0.67
HOXB3-211ENST00000490677 TMEM78Q5T7P6 136 aa19.25■□□□□ 0.67
HOXB3-211ENST00000490677 ZNF575Q86XF7 245 aa19.25■□□□□ 0.67
HOXB3-211ENST00000490677 C6orf223Q8N319 242 aa19.25■□□□□ 0.67
HOXB3-211ENST00000490677 SPINK4O60575 86 aa19.24■□□□□ 0.67
HOXB3-211ENST00000490677 Q8TAT8 98 aa19.24■□□□□ 0.67
HOXB3-211ENST00000490677 C17orf112F2Z3M2 114 aa19.23■□□□□ 0.67
HOXB3-211ENST00000490677 IBA57Q5T440 356 aaKnown RBP19.23■□□□□ 0.67
HOXB3-211ENST00000490677 UPK3BQ9BT76 320 aa19.23■□□□□ 0.67
HOXB3-211ENST00000490677 Q9H8V8 135 aa19.23■□□□□ 0.67
HOXB3-211ENST00000490677 WFDC1Q9HC57 220 aa19.23■□□□□ 0.67
HOXB3-211ENST00000490677 TRBV7-9A0A0J9YWB2 115 aa19.22■□□□□ 0.67
HOXB3-211ENST00000490677 SSNA1O43805 119 aa19.22■□□□□ 0.67
HOXB3-211ENST00000490677 ZNF138P52744 262 aa19.22■□□□□ 0.67
HOXB3-211ENST00000490677 FFAR4Q5NUL3 377 aa19.22■□□□□ 0.67
HOXB3-211ENST00000490677 MBD2Q9UBB5 411 aa19.22■□□□□ 0.67
HOXB3-211ENST00000490677 OR7C2O60412 319 aa19.21■□□□□ 0.67
HOXB3-211ENST00000490677 RPL12P30050 165 aaKnown RBP19.21■□□□□ 0.67
HOXB3-211ENST00000490677 SMIM3Q9BZL3 60 aa19.21■□□□□ 0.67
HOXB3-211ENST00000490677 Q9H3A6 140 aa19.21■□□□□ 0.67
HOXB3-211ENST00000490677 IGHV1OR15-1A0A075B7D0 117 aa19.2■□□□□ 0.66
HOXB3-211ENST00000490677 A0A096LPF7 62 aa19.2■□□□□ 0.66
HOXB3-211ENST00000490677 TRGV1A0A0A0MS02 117 aa19.2■□□□□ 0.66
HOXB3-211ENST00000490677 RBAKDNA6NC62 111 aa19.2■□□□□ 0.66
HOXB3-211ENST00000490677 RANP62826 216 aaKnown RBP19.2■□□□□ 0.66
HOXB3-211ENST00000490677 LYPD1Q8N2G4 141 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms