RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 DIRC3C9JPN6 131 aa10.38□□□□□ -0.75
SRGAP3-208ENST00000490348 CDKN1BP46527 198 aa10.38□□□□□ -0.75
SRGAP3-208ENST00000490348 EIF5AP63241 154 aaKnown RBP10.38□□□□□ -0.75
SRGAP3-208ENST00000490348 ODF3Q96PU9 254 aa10.38□□□□□ -0.75
SRGAP3-208ENST00000490348 MAP1LC3BQ9GZQ8 125 aa10.38□□□□□ -0.75
SRGAP3-208ENST00000490348 C11orf68Q9H3H3 251 aaKnown RBP10.38□□□□□ -0.75
SRGAP3-208ENST00000490348 TMEM167BQ9NRX6 74 aa10.38□□□□□ -0.75
SRGAP3-208ENST00000490348 IGHV3OR16-12A0A075B7B8 117 aa10.37□□□□□ -0.75
SRGAP3-208ENST00000490348 INSP01308 110 aa10.37□□□□□ -0.75
SRGAP3-208ENST00000490348 AMBPP02760 352 aa10.37□□□□□ -0.75
SRGAP3-208ENST00000490348 PRM2P04554 102 aa10.37□□□□□ -0.75
SRGAP3-208ENST00000490348 MIFP14174 115 aa10.37□□□□□ -0.75
SRGAP3-208ENST00000490348 SLC51BQ86UW2 128 aa10.37□□□□□ -0.75
SRGAP3-208ENST00000490348 MUC7Q8TAX7 377 aa10.37□□□□□ -0.75
SRGAP3-208ENST00000490348 FAM213BQ8TBF2 198 aa10.37□□□□□ -0.75
SRGAP3-208ENST00000490348 PPP1R14DQ9NXH3 145 aa10.37□□□□□ -0.75
SRGAP3-208ENST00000490348 YTHDF2Q9Y5A9 579 aaKnown RBP10.37□□□□□ -0.75
SRGAP3-208ENST00000490348 GNG5P63218 68 aa10.36□□□□□ -0.75
SRGAP3-208ENST00000490348 GFI1BQ5VTD9 330 aa10.36□□□□□ -0.75
SRGAP3-208ENST00000490348 IQCF2Q8IXL9 164 aa10.36□□□□□ -0.75
SRGAP3-208ENST00000490348 Q8TAT8 98 aa10.36□□□□□ -0.75
SRGAP3-208ENST00000490348 LINC00477Q96M19 166 aa10.36□□□□□ -0.75
SRGAP3-208ENST00000490348 NEU1Q99519 415 aa10.36□□□□□ -0.75
SRGAP3-208ENST00000490348 RBAKDNA6NC62 111 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 J3KRW8 73 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 CSN1S1P47710 185 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 IL17DQ8TAD2 202 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 RXFP4Q8TDU9 374 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 MBD3L1Q8WWY6 194 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 ZNF492Q9P255 531 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 GOLT1BQ9Y3E0 138 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 BOLA1Q9Y3E2 137 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 KLLNB2CW77 178 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 CRISP2P16562 243 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 UBE2G2P60604 165 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 TMEM78Q5T7P6 136 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 PRR9Q5T870 116 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 DPPA3Q6W0C5 159 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 GOLT1AQ6ZVE7 132 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 ZFAND2AQ8N6M9 145 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 CMTM2Q8TAZ6 248 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 SFT2D1Q8WV19 159 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 RPH3ALQ9UNE2 315 aa10.35□□□□□ -0.75
SRGAP3-208ENST00000490348 TRAV8-1A0A0A6YYK1 113 aa10.34□□□□□ -0.75
SRGAP3-208ENST00000490348 A0A1W2PRE2 83 aa10.34□□□□□ -0.75
SRGAP3-208ENST00000490348 FAM74A7A6NL05 159 aa10.34□□□□□ -0.75
SRGAP3-208ENST00000490348 SLC25A5P05141 298 aaKnown RBP10.34□□□□□ -0.75
SRGAP3-208ENST00000490348 TSPOP30536 169 aa10.34□□□□□ -0.75
SRGAP3-208ENST00000490348 LEPP41159 167 aa10.34□□□□□ -0.75
SRGAP3-208ENST00000490348 ZNF138P52744 262 aa10.34□□□□□ -0.75
SRGAP3-208ENST00000490348 SUMO1P63165 101 aaKnown RBP10.34□□□□□ -0.75
SRGAP3-208ENST00000490348 FAM74A1Q5RGS3 127 aa10.34□□□□□ -0.75
SRGAP3-208ENST00000490348 ZNF767PQ75MW2 155 aa10.34□□□□□ -0.75
SRGAP3-208ENST00000490348 SLC7A5P1Q8MH63 180 aa10.34□□□□□ -0.75
SRGAP3-208ENST00000490348 ARL6IP6Q8N6S5 226 aa10.34□□□□□ -0.75
SRGAP3-208ENST00000490348 A0A1B0GV50 99 aa10.33□□□□□ -0.76
SRGAP3-208ENST00000490348 SMIM9A6NGZ8 99 aa10.33□□□□□ -0.76
SRGAP3-208ENST00000490348 ZNF705GA8MUZ8 300 aaPredicted RBP10.33□□□□□ -0.76
SRGAP3-208ENST00000490348 Q6ZQT7 251 aa10.33□□□□□ -0.76
SRGAP3-208ENST00000490348 C5orf17Q8NAS9 161 aa10.33□□□□□ -0.76
SRGAP3-208ENST00000490348 TMEM208Q9BTX3 173 aa10.33□□□□□ -0.76
SRGAP3-208ENST00000490348 CELA1Q9UNI1 258 aa10.33□□□□□ -0.76
SRGAP3-208ENST00000490348 TRAV12-3A0A0B4J271 114 aa10.32□□□□□ -0.76
SRGAP3-208ENST00000490348 TCRAP04437 139 aa10.32□□□□□ -0.76
SRGAP3-208ENST00000490348 AZU1P20160 251 aa10.32□□□□□ -0.76
SRGAP3-208ENST00000490348 SULT1A2P50226 295 aa10.32□□□□□ -0.76
SRGAP3-208ENST00000490348 BTN1A1Q13410 526 aa10.32□□□□□ -0.76
SRGAP3-208ENST00000490348 ZFAND6Q6FIF0 208 aa10.32□□□□□ -0.76
SRGAP3-208ENST00000490348 EIF5AL1Q6IS14 154 aaKnown RBP10.32□□□□□ -0.76
SRGAP3-208ENST00000490348 TVP23CQ96ET8 276 aa10.32□□□□□ -0.76
SRGAP3-208ENST00000490348 EPDR1Q9UM22 224 aa10.32□□□□□ -0.76
SRGAP3-208ENST00000490348 C3orf84H3BNL1 204 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 ZNF324O75467 553 aaPredicted RBP10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 IGLV2-11P01706 119 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 H2AFB1P0C5Y9 115 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 RAB5CP51148 216 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 NANOS2P60321 138 aaKnown RBP10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 CCL20P78556 96 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 CASC10Q5T4H9 136 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 CCDC28AQ8IWP9 274 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 SGK494Q96LW2 274 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 LINC01587Q99440 93 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 TRBV7-9A0A0J9YWB2 115 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 LOC102723971A0A1B0GUV8 181 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 PLAC8L1A1L4L8 177 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 C7orf71A4D174 169 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 HBE1P02100 147 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 NMBP08949 121 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 RNASE4P34096 147 aaKnown RBP10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 EMP1P54849 157 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 RRN3P1Q2M238 152 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 TMEM256Q8N2U0 113 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 C11orf45Q8TAV5 145 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 LINC00479Q96M42 142 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 C20orf144Q9BQM9 153 aa10.31□□□□□ -0.76
SRGAP3-208ENST00000490348 H7BYZ3 331 aa10.3□□□□□ -0.76
SRGAP3-208ENST00000490348 TAS2R60P59551 318 aa10.3□□□□□ -0.76
SRGAP3-208ENST00000490348 ATG101Q9BSB4 218 aa10.3□□□□□ -0.76
SRGAP3-208ENST00000490348 SACSQ9NZJ4 4579 aa10.29□□□□□ -0.76
SRGAP3-208ENST00000490348 TRAV1-1A0A0B4J248 108 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms