RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 TCTEX1D4Q5JR98 221 aa8.93□□□□□ -0.98
TRIM40-208ENST00000489892 MORN5Q5VZ52 161 aa8.93□□□□□ -0.98
TRIM40-208ENST00000489892 C12orf54Q6X4T0 127 aa8.93□□□□□ -0.98
TRIM40-208ENST00000489892 NDUFA11Q86Y39 141 aa8.93□□□□□ -0.98
TRIM40-208ENST00000489892 SLC50A1Q9BRV3 221 aa8.93□□□□□ -0.98
TRIM40-208ENST00000489892 ATG101Q9BSB4 218 aa8.93□□□□□ -0.98
TRIM40-208ENST00000489892 AAMDCQ9H7C9 122 aa8.93□□□□□ -0.98
TRIM40-208ENST00000489892 ZNF331Q9NQX6 463 aaPredicted RBP8.93□□□□□ -0.98
TRIM40-208ENST00000489892 KLF12Q9Y4X4 402 aa8.93□□□□□ -0.98
TRIM40-208ENST00000489892 PKD1L1Q8TDX9 2849 aa8.93□□□□□ -0.98
TRIM40-208ENST00000489892 IGHV4OR15-8A0A075B7B6 117 aa8.92□□□□□ -0.98
TRIM40-208ENST00000489892 A0A087WW49 117 aa8.92□□□□□ -0.98
TRIM40-208ENST00000489892 A0A087X0K7 114 aa8.92□□□□□ -0.98
TRIM40-208ENST00000489892 IGLC2P0DOY2 106 aa8.92□□□□□ -0.98
TRIM40-208ENST00000489892 PYYP10082 97 aa8.92□□□□□ -0.98
TRIM40-208ENST00000489892 MGST1P10620 155 aaKnown RBP8.92□□□□□ -0.98
TRIM40-208ENST00000489892 CBLN1P23435 193 aa8.92□□□□□ -0.98
TRIM40-208ENST00000489892 DMRTA1Q5VZB9 504 aa8.92□□□□□ -0.98
TRIM40-208ENST00000489892 LEMD1Q68G75 181 aa8.92□□□□□ -0.98
TRIM40-208ENST00000489892 SIGLEC15Q6ZMC9 328 aa8.92□□□□□ -0.98
TRIM40-208ENST00000489892 TMEM136Q6ZRR5 245 aa8.92□□□□□ -0.98
TRIM40-208ENST00000489892 BAGE2Q86Y30 109 aa8.92□□□□□ -0.98
TRIM40-208ENST00000489892 ARL6IP6Q8N6S5 226 aa8.92□□□□□ -0.98
TRIM40-208ENST00000489892 OR11H1Q8NG94 326 aa8.92□□□□□ -0.98
TRIM40-208ENST00000489892 NDUFAF3Q9BU61 184 aa8.92□□□□□ -0.98
TRIM40-208ENST00000489892 OTORQ9NRC9 128 aa8.92□□□□□ -0.98
TRIM40-208ENST00000489892 ZMAT5Q9UDW3 170 aaKnown RBP8.92□□□□□ -0.98
TRIM40-208ENST00000489892 NAT8BQ9UHF3 227 aa8.92□□□□□ -0.98
TRIM40-208ENST00000489892 EPDR1Q9UM22 224 aa8.92□□□□□ -0.98
TRIM40-208ENST00000489892 TRBV19A0A075B6N1 114 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 KIR2DL5BA0A0G2JN68 375 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 KIR2DL5BA0A0G2JPC4 375 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 SERTM2A0A1B0GWG4 89 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 FAM231BA6NCW3 169 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 ZNF785A8K8V0 405 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 K7EQM0 130 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 SLC25A5P05141 298 aaKnown RBP8.91□□□□□ -0.98
TRIM40-208ENST00000489892 CD28P10747 220 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 RAB4AP20338 218 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 CSN1S1P47710 185 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 KLF5Q13887 457 aaPredicted RBP8.91□□□□□ -0.98
TRIM40-208ENST00000489892 CDPF1Q6NVV7 123 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 C16orf54Q6UWD8 224 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 UNQ9165/PRO28630Q6UXU0 137 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 BAGE3Q86Y29 109 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 KIR2DL5AQ8N109 375 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 OR4B1Q8NGF8 309 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 BLNKQ8WV28 456 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 CITED2Q99967 270 aaPredicted RBP8.91□□□□□ -0.98
TRIM40-208ENST00000489892 KRTAP17-1Q9BYP8 105 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 GFRA4Q9GZZ7 299 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 SMPXQ9UHP9 88 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 NAGKQ9UJ70 344 aa8.91□□□□□ -0.98
TRIM40-208ENST00000489892 MEGF8Q7Z7M0 2845 aa8.9□□□□□ -0.98
TRIM40-208ENST00000489892 IGHV3OR16-8A0A075B7F1 116 aa8.9□□□□□ -0.98
TRIM40-208ENST00000489892 FBLL1A6NHQ2 334 aaKnown RBP8.9□□□□□ -0.98
TRIM40-208ENST00000489892 CCL24O00175 119 aa8.9□□□□□ -0.98
TRIM40-208ENST00000489892 SYNJ2BPP57105 145 aa8.9□□□□□ -0.98
TRIM40-208ENST00000489892 OR5I1Q13606 314 aa8.9□□□□□ -0.98
TRIM40-208ENST00000489892 FHL3Q13643 280 aa8.9□□□□□ -0.98
TRIM40-208ENST00000489892 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.9□□□□□ -0.98
TRIM40-208ENST00000489892 TSKUQ8WUA8 353 aa8.9□□□□□ -0.98
TRIM40-208ENST00000489892 GLMPQ8WWB7 406 aa8.9□□□□□ -0.98
TRIM40-208ENST00000489892 ZNF414Q96IQ9 312 aa8.9□□□□□ -0.98
TRIM40-208ENST00000489892 KCNS1Q96KK3 526 aa8.9□□□□□ -0.98
TRIM40-208ENST00000489892 RHPN1-AS1Q9BWJ2 59 aa8.9□□□□□ -0.98
TRIM40-208ENST00000489892 RNASE7Q9H1E1 156 aaKnown RBP8.9□□□□□ -0.98
TRIM40-208ENST00000489892 ZNF586Q9NXT0 402 aa8.9□□□□□ -0.98
TRIM40-208ENST00000489892 A8MWL6 223 aa8.89□□□□□ -0.99
TRIM40-208ENST00000489892 MRPS12O15235 138 aaKnown RBP8.89□□□□□ -0.99
TRIM40-208ENST00000489892 ZNF207O43670 478 aaKnown RBP8.89□□□□□ -0.99
TRIM40-208ENST00000489892 SCGB1D1O95968 90 aa8.89□□□□□ -0.99
TRIM40-208ENST00000489892 C8orf86Q6ZUL3 223 aa8.89□□□□□ -0.99
TRIM40-208ENST00000489892 OR9G4Q8NGQ1 327 aa8.89□□□□□ -0.99
TRIM40-208ENST00000489892 C14orf144Q96I85 54 aa8.89□□□□□ -0.99
TRIM40-208ENST00000489892 SAMD10Q9BYL1 202 aa8.89□□□□□ -0.99
TRIM40-208ENST00000489892 Q9H3A6 140 aa8.89□□□□□ -0.99
TRIM40-208ENST00000489892 TMEM213A2RRL7 107 aa8.88□□□□□ -0.99
TRIM40-208ENST00000489892 PGPA6NDG6 321 aa8.88□□□□□ -0.99
TRIM40-208ENST00000489892 CHEK1O14757 476 aa8.88□□□□□ -0.99
TRIM40-208ENST00000489892 SERF1AO75920 110 aa8.88□□□□□ -0.99
TRIM40-208ENST00000489892 LTAP01374 205 aa8.88□□□□□ -0.99
TRIM40-208ENST00000489892 APCSP02743 223 aa8.88□□□□□ -0.99
TRIM40-208ENST00000489892 TM4SF20Q53R12 229 aa8.88□□□□□ -0.99
TRIM40-208ENST00000489892 TEX43Q6ZNM6 134 aa8.88□□□□□ -0.99
TRIM40-208ENST00000489892 TMEM256Q8N2U0 113 aa8.88□□□□□ -0.99
TRIM40-208ENST00000489892 ZNF664Q8N3J9 261 aa8.88□□□□□ -0.99
TRIM40-208ENST00000489892 MRPL53Q96EL3 112 aaKnown RBP8.88□□□□□ -0.99
TRIM40-208ENST00000489892 C2orf88Q9BSF0 95 aa8.88□□□□□ -0.99
TRIM40-208ENST00000489892 RPP21Q9H633 154 aaKnown RBP8.88□□□□□ -0.99
TRIM40-208ENST00000489892 NRN1Q9NPD7 142 aa8.88□□□□□ -0.99
TRIM40-208ENST00000489892 TGP01266 2768 aa8.88□□□□□ -0.99
TRIM40-208ENST00000489892 A0A1W2PRX2 142 aa8.87□□□□□ -0.99
TRIM40-208ENST00000489892 C2orf70A6NJV1 201 aa8.87□□□□□ -0.99
TRIM40-208ENST00000489892 TCRAP04437 139 aa8.87□□□□□ -0.99
TRIM40-208ENST00000489892 ID1P41134 155 aa8.87□□□□□ -0.99
TRIM40-208ENST00000489892 SSTP61278 116 aa8.87□□□□□ -0.99
TRIM40-208ENST00000489892 RPL11P62913 178 aaKnown RBP8.87□□□□□ -0.99
TRIM40-208ENST00000489892 DEFB136Q30KP8 78 aa8.87□□□□□ -0.99
TRIM40-208ENST00000489892 C3orf56Q8N813 242 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms